RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 ZBTB7AO95365 584 aa30.52■■■□□ 2.48
PVT1-212ENST00000521951 ITPRIPQ8IWB1 547 aa30.52■■■□□ 2.48
PVT1-212ENST00000521951 COL24A1Q17RW2 1714 aa30.51■■■□□ 2.48
PVT1-212ENST00000521951 FAM177BA6PVY3 158 aa30.51■■■□□ 2.47
PVT1-212ENST00000521951 DDR1Q08345 913 aa30.51■■■□□ 2.47
PVT1-212ENST00000521951 MTFR1LQ9H019 292 aa30.51■■■□□ 2.47
PVT1-212ENST00000521951 CARMIL3Q8ND23 1372 aa30.51■■■□□ 2.47
PVT1-212ENST00000521951 MMP10P09238 476 aa30.5■■■□□ 2.47
PVT1-212ENST00000521951 MVPQ14764 893 aaKnown RBP30.5■■■□□ 2.47
PVT1-212ENST00000521951 PPP1R42Q7Z4L9 355 aa30.5■■■□□ 2.47
PVT1-212ENST00000521951 POLRMTO00411 1230 aaKnown RBP30.49■■■□□ 2.47
PVT1-212ENST00000521951 IBTKQ9P2D0 1353 aaPredicted RBP30.49■■■□□ 2.47
PVT1-212ENST00000521951 UTP14AQ9BVJ6 771 aaKnown RBP30.48■■■□□ 2.47
PVT1-212ENST00000521951 USP44Q9H0E7 712 aa30.48■■■□□ 2.47
PVT1-212ENST00000521951 TRMT112Q9UI30 125 aaKnown RBP30.48■■■□□ 2.47
PVT1-212ENST00000521951 ATF5Q9Y2D1 282 aaPredicted RBP30.48■■■□□ 2.47
PVT1-212ENST00000521951 NTSR2O95665 410 aa30.47■■■□□ 2.47
PVT1-212ENST00000521951 SERPINB2P05120 415 aa30.47■■■□□ 2.47
PVT1-212ENST00000521951 C9orf78Q9NZ63 289 aaPredicted RBP30.47■■■□□ 2.47
PVT1-212ENST00000521951 IRX6P78412 446 aaPredicted RBP30.47■■■□□ 2.47
PVT1-212ENST00000521951 NBPF5PQ86XG9 351 aaPredicted RBP30.47■■■□□ 2.47
PVT1-212ENST00000521951 JARID2Q92833 1246 aaPredicted RBP30.47■■■□□ 2.47
PVT1-212ENST00000521951 PARP3Q9Y6F1 533 aa30.47■■■□□ 2.47
PVT1-212ENST00000521951 H7C1W4 665 aa30.46■■■□□ 2.47
PVT1-212ENST00000521951 GRM8O00222 908 aa30.46■■■□□ 2.47
PVT1-212ENST00000521951 ZBTB38Q8NAP3 1195 aaPredicted RBP30.46■■■□□ 2.47
PVT1-212ENST00000521951 CRBNQ96SW2 442 aa30.46■■■□□ 2.47
PVT1-212ENST00000521951 NYXQ9GZU5 481 aa30.46■■■□□ 2.47
PVT1-212ENST00000521951 PCCAP05165 728 aaPredicted RBP30.45■■■□□ 2.47
PVT1-212ENST00000521951 TPTE2Q6XPS3 522 aa30.45■■■□□ 2.47
PVT1-212ENST00000521951 FAM89AQ96GI7 184 aa30.45■■■□□ 2.47
PVT1-212ENST00000521951 DDX19BQ9UMR2 479 aa30.45■■■□□ 2.47
PVT1-212ENST00000521951 ZBTB7BO15156 539 aaPredicted RBP30.44■■■□□ 2.46
PVT1-212ENST00000521951 RTL5Q5HYW3 569 aaPredicted RBP30.44■■■□□ 2.46
PVT1-212ENST00000521951 SYNE4Q8N205 404 aa30.44■■■□□ 2.46
PVT1-212ENST00000521951 MEIS3Q99687 375 aa30.44■■■□□ 2.46
PVT1-212ENST00000521951 UTYO14607 1347 aa30.43■■■□□ 2.46
PVT1-212ENST00000521951 NBPF7P0C2Y1 421 aaPredicted RBP30.43■■■□□ 2.46
PVT1-212ENST00000521951 CASP7P55210 303 aa30.43■■■□□ 2.46
PVT1-212ENST00000521951 UBE3BQ7Z3V4 1068 aa30.43■■■□□ 2.46
PVT1-212ENST00000521951 NUTM1Q86Y26 1132 aa30.43■■■□□ 2.46
PVT1-212ENST00000521951 SH3TC1Q8TE82 1336 aa30.42■■■□□ 2.46
PVT1-212ENST00000521951 ERFEQ4G0M1 354 aa30.42■■■□□ 2.46
PVT1-212ENST00000521951 NRXN2Q9P2S2 1712 aa30.42■■■□□ 2.46
PVT1-212ENST00000521951 GTF2E1P29083 439 aaPredicted RBP30.41■■■□□ 2.46
PVT1-212ENST00000521951 PRR5LQ6MZQ0 368 aa30.41■■■□□ 2.46
PVT1-212ENST00000521951 CNBD1Q8NA66 436 aa30.41■■■□□ 2.46
PVT1-212ENST00000521951 GNAI3P08754 354 aa30.4■■■□□ 2.46
PVT1-212ENST00000521951 NPHP1O15259 732 aa30.39■■■□□ 2.46
PVT1-212ENST00000521951 CCDC24Q8N4L8 307 aa30.39■■■□□ 2.46
PVT1-212ENST00000521951 CDHR2Q9BYE9 1310 aa30.39■■■□□ 2.45
PVT1-212ENST00000521951 UBTFL1P0CB47 393 aaPredicted RBP30.38■■■□□ 2.45
PVT1-212ENST00000521951 POLD1P28340 1107 aa30.38■■■□□ 2.45
PVT1-212ENST00000521951 SGIP1Q9BQI5 828 aa30.38■■■□□ 2.45
PVT1-212ENST00000521951 IRS4O14654 1257 aaPredicted RBP30.37■■■□□ 2.45
PVT1-212ENST00000521951 EXOC6Q8TAG9 804 aa30.37■■■□□ 2.45
PVT1-212ENST00000521951 PTGER2P43116 358 aa30.37■■■□□ 2.45
PVT1-212ENST00000521951 SLC10A5Q5PT55 438 aa30.37■■■□□ 2.45
PVT1-212ENST00000521951 CHMP4BQ9H444 224 aaKnown RBP30.37■■■□□ 2.45
PVT1-212ENST00000521951 ABCC12Q96J65 1359 aa30.36■■■□□ 2.45
PVT1-212ENST00000521951 HCLS1P14317 486 aaPredicted RBP30.36■■■□□ 2.45
PVT1-212ENST00000521951 SUCLG2Q96I99 432 aa30.36■■■□□ 2.45
PVT1-212ENST00000521951 SPON1Q9HCB6 807 aa30.36■■■□□ 2.45
PVT1-212ENST00000521951 ZBTB40Q9NUA8 1239 aa30.36■■■□□ 2.45
PVT1-212ENST00000521951 ST5P78524 1137 aa30.35■■■□□ 2.45
PVT1-212ENST00000521951 DDX60Q8IY21 1712 aaKnown RBP30.34■■■□□ 2.45
PVT1-212ENST00000521951 KAZALD1Q96I82 304 aa30.34■■■□□ 2.45
PVT1-212ENST00000521951 GNAI2P04899 355 aa30.32■■■□□ 2.44
PVT1-212ENST00000521951 NEFLP07196 543 aa30.32■■■□□ 2.44
PVT1-212ENST00000521951 PLA2G12BQ9BX93 195 aa30.32■■■□□ 2.44
PVT1-212ENST00000521951 HDAC5Q9UQL6 1122 aa30.32■■■□□ 2.44
PVT1-212ENST00000521951 LRRFIP2Q9Y608 721 aaKnown RBP30.32■■■□□ 2.44
PVT1-212ENST00000521951 LAMB2P55268 1798 aa30.32■■■□□ 2.44
PVT1-212ENST00000521951 PDE8AO60658 829 aa30.32■■■□□ 2.44
PVT1-212ENST00000521951 HSP90B1P14625 803 aaKnown RBP30.32■■■□□ 2.44
PVT1-212ENST00000521951 EPHA10Q5JZY3 1008 aa30.32■■■□□ 2.44
PVT1-212ENST00000521951 C1orf115Q9H7X2 142 aa30.31■■■□□ 2.44
PVT1-212ENST00000521951 FOXO4P98177 505 aa30.3■■■□□ 2.44
PVT1-212ENST00000521951 ANKRD31Q8N7Z5 1873 aa30.3■■■□□ 2.44
PVT1-212ENST00000521951 MYH3P11055 1940 aa30.3■■■□□ 2.44
PVT1-212ENST00000521951 BRIP1Q9BX63 1249 aa30.29■■■□□ 2.44
PVT1-212ENST00000521951 RIC1Q4ADV7 1423 aa30.29■■■□□ 2.44
PVT1-212ENST00000521951 C3orf67Q6ZVT6 689 aa30.28■■■□□ 2.44
PVT1-212ENST00000521951 BICC1Q9H694 974 aaKnown RBP30.28■■■□□ 2.44
PVT1-212ENST00000521951 NLRP3Q96P20 1036 aa30.27■■■□□ 2.44
PVT1-212ENST00000521951 TNRC6CQ9HCJ0 1690 aaKnown RBP30.27■■■□□ 2.44
PVT1-212ENST00000521951 ANKRD44Q8N8A2 993 aa30.27■■■□□ 2.44
PVT1-212ENST00000521951 CTSWP56202 376 aa30.26■■■□□ 2.43
PVT1-212ENST00000521951 C10orf71Q711Q0 1435 aa30.25■■■□□ 2.43
PVT1-212ENST00000521951 CSF1RP07333 972 aa30.25■■■□□ 2.43
PVT1-212ENST00000521951 AAMPQ13685 434 aa30.25■■■□□ 2.43
PVT1-212ENST00000521951 RABL6Q3YEC7 729 aaPredicted RBP30.25■■■□□ 2.43
PVT1-212ENST00000521951 LMBR1LQ6UX01 489 aa30.25■■■□□ 2.43
PVT1-212ENST00000521951 TTLL11Q8NHH1 800 aa30.25■■■□□ 2.43
PVT1-212ENST00000521951 SF3B3Q15393 1217 aaKnown RBP30.24■■■□□ 2.43
PVT1-212ENST00000521951 KLRG2A4D1S0 409 aaPredicted RBP30.23■■■□□ 2.43
PVT1-212ENST00000521951 KIF13BQ9NQT8 1826 aa30.23■■■□□ 2.43
PVT1-212ENST00000521951 PDE6BP35913 854 aa30.22■■■□□ 2.43
PVT1-212ENST00000521951 CCDC85AQ96PX6 553 aaPredicted RBP30.22■■■□□ 2.43
PVT1-212ENST00000521951 CRY2Q49AN0 593 aa30.2■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms