RNA–Protein interactions for RNA: ENST00000521615.1

CLINT1-204, Transcript of clathrin interactor 1, humanhuman

TSL 3

Gene CLINT1, Length 399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-204ENST00000521615 GNPATO15228 680 aa6.88□□□□□ -1.31
CLINT1-204ENST00000521615 NBPF7P0C2Y1 421 aaPredicted RBP6.88□□□□□ -1.31
CLINT1-204ENST00000521615 TCIRG1Q13488 830 aa6.88□□□□□ -1.31
CLINT1-204ENST00000521615 PTF1AQ7RTS3 328 aa6.88□□□□□ -1.31
CLINT1-204ENST00000521615 SMC5Q8IY18 1101 aa6.88□□□□□ -1.31
CLINT1-204ENST00000521615 RTCBQ9Y3I0 505 aaKnown RBP6.88□□□□□ -1.31
CLINT1-204ENST00000521615 QSER1Q2KHR3 1735 aa6.87□□□□□ -1.31
CLINT1-204ENST00000521615 DDX60Q8IY21 1712 aaKnown RBP6.87□□□□□ -1.31
CLINT1-204ENST00000521615 SRGAP3O43295 1099 aa6.87□□□□□ -1.31
CLINT1-204ENST00000521615 RPS6KA4O75676 772 aa6.87□□□□□ -1.31
CLINT1-204ENST00000521615 APBA3O96018 575 aa6.87□□□□□ -1.31
CLINT1-204ENST00000521615 HSP90B1P14625 803 aaKnown RBP6.87□□□□□ -1.31
CLINT1-204ENST00000521615 ATP8B2P98198 1209 aa6.87□□□□□ -1.31
CLINT1-204ENST00000521615 TRIM28Q13263 835 aaKnown RBP6.87□□□□□ -1.31
CLINT1-204ENST00000521615 MTX1Q13505 466 aa6.87□□□□□ -1.31
CLINT1-204ENST00000521615 HSP90AB4PQ58FF6 505 aa6.87□□□□□ -1.31
CLINT1-204ENST00000521615 UBE3BQ7Z3V4 1068 aa6.87□□□□□ -1.31
CLINT1-204ENST00000521615 ISCA1Q9BUE6 129 aa6.87□□□□□ -1.31
CLINT1-204ENST00000521615 PDZRN3Q9UPQ7 1066 aa6.87□□□□□ -1.31
CLINT1-204ENST00000521615 TBC1D2BQ9UPU7 963 aa6.87□□□□□ -1.31
CLINT1-204ENST00000521615 CDHR2Q9BYE9 1310 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 H7C1W4 665 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 PLSCR1O15162 318 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 ZPR1O75312 459 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 PCCAP05165 728 aaPredicted RBP6.86□□□□□ -1.31
CLINT1-204ENST00000521615 RGS3P49796 1198 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 KCNQ4P56696 695 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 NUCB1Q02818 461 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 SF3B2Q13435 895 aaKnown RBP6.86□□□□□ -1.31
CLINT1-204ENST00000521615 TXNRD1Q16881 649 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 PARP10Q53GL7 1025 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 CLEC4GQ6UXB4 293 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 PAXIP1Q6ZW49 1069 aaPredicted RBP6.86□□□□□ -1.31
CLINT1-204ENST00000521615 PPP1R42Q7Z4L9 355 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 CHD1LQ86WJ1 897 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 SIRT2Q8IXJ6 389 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 SSH3Q8TE77 659 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 SUCLG2Q96I99 432 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 BICC1Q9H694 974 aaKnown RBP6.86□□□□□ -1.31
CLINT1-204ENST00000521615 DCTPP1Q9H773 170 aa6.86□□□□□ -1.31
CLINT1-204ENST00000521615 PNMA6EA0A0J9YXQ4 647 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 RAB11FIP3O75154 756 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 PHF14O94880 888 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 CAMTA2O94983 1202 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 GPTP24298 496 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 RFC4P35249 363 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 OS9Q13438 667 aaPredicted RBP6.85□□□□□ -1.31
CLINT1-204ENST00000521615 POLA2Q14181 598 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 HLFQ16534 295 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 TRAPPC3LQ5T215 181 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 ANKRD45Q5TZF3 282 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 NLRP10Q86W26 655 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 ERC1Q8IUD2 1116 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 ZBTB38Q8NAP3 1195 aaPredicted RBP6.85□□□□□ -1.31
CLINT1-204ENST00000521615 LRRCC1Q9C099 1032 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 NARFQ9UHQ1 456 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 TRMT112Q9UI30 125 aaKnown RBP6.85□□□□□ -1.31
CLINT1-204ENST00000521615 NIP7Q9Y221 180 aaKnown RBP eCLIP6.85□□□□□ -1.31
CLINT1-204ENST00000521615 SPEF2Q9C093 1822 aa6.85□□□□□ -1.31
CLINT1-204ENST00000521615 APBB1O00213 710 aa6.84□□□□□ -1.31
CLINT1-204ENST00000521615 SURF6O75683 361 aaKnown RBP6.84□□□□□ -1.31
CLINT1-204ENST00000521615 SSFA2P28290 1259 aa6.84□□□□□ -1.31
CLINT1-204ENST00000521615 CASP7P55210 303 aa6.84□□□□□ -1.31
CLINT1-204ENST00000521615 USPL1Q5W0Q7 1092 aa6.84□□□□□ -1.31
CLINT1-204ENST00000521615 ZNF34Q8IZ26 560 aa6.84□□□□□ -1.31
CLINT1-204ENST00000521615 UTP14AQ9BVJ6 771 aaKnown RBP6.84□□□□□ -1.31
CLINT1-204ENST00000521615 LNPKQ9C0E8 428 aa6.84□□□□□ -1.31
CLINT1-204ENST00000521615 NYXQ9GZU5 481 aa6.84□□□□□ -1.31
CLINT1-204ENST00000521615 LRRC4BQ9NT99 713 aa6.84□□□□□ -1.31
CLINT1-204ENST00000521615 EXOC6BQ9Y2D4 811 aa6.84□□□□□ -1.31
CLINT1-204ENST00000521615 CHMP3Q9Y3E7 222 aa6.84□□□□□ -1.31
CLINT1-204ENST00000521615 CARMIL3Q8ND23 1372 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 UBN2Q6ZU65 1347 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 SH3TC1Q8TE82 1336 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 USP42Q9H9J4 1324 aaKnown RBP6.83□□□□□ -1.32
CLINT1-204ENST00000521615 SPDYE4A6NLX3 237 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 IRS4O14654 1257 aaPredicted RBP6.83□□□□□ -1.32
CLINT1-204ENST00000521615 NPHP1O15259 732 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 BAG6P46379 1132 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 G3BP1Q13283 466 aaKnown RBP eCLIP6.83□□□□□ -1.32
CLINT1-204ENST00000521615 RABL6Q3YEC7 729 aaPredicted RBP6.83□□□□□ -1.32
CLINT1-204ENST00000521615 RTL5Q5HYW3 569 aaPredicted RBP6.83□□□□□ -1.32
CLINT1-204ENST00000521615 LMBR1LQ6UX01 489 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 FLAD1Q8NFF5 587 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 JARID2Q92833 1246 aaPredicted RBP6.83□□□□□ -1.32
CLINT1-204ENST00000521615 ARHGEF1Q92888 912 aaKnown RBP6.83□□□□□ -1.32
CLINT1-204ENST00000521615 KIF1BPQ96EK5 621 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 FAM89AQ96GI7 184 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 SETDB2Q96T68 719 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 PLA2G12BQ9BX93 195 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 AK9Q5TCS8 1911 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 LRP5O75197 1615 aa6.83□□□□□ -1.32
CLINT1-204ENST00000521615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.82□□□□□ -1.32
CLINT1-204ENST00000521615 FAM177BA6PVY3 158 aa6.82□□□□□ -1.32
CLINT1-204ENST00000521615 PDE8AO60658 829 aa6.82□□□□□ -1.32
CLINT1-204ENST00000521615 NTSR2O95665 410 aa6.82□□□□□ -1.32
CLINT1-204ENST00000521615 GTF2E1P29083 439 aaPredicted RBP6.82□□□□□ -1.32
CLINT1-204ENST00000521615 CTSWP56202 376 aa6.82□□□□□ -1.32
CLINT1-204ENST00000521615 FOXO4P98177 505 aa6.82□□□□□ -1.32
CLINT1-204ENST00000521615 CCDC57Q2TAC2 916 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms