RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ELOA3DA6NLF2 546 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-209ENST00000521559 GSK3AP49840 483 aa6.28□□□□□ -1.4
VPS13B-209ENST00000521559 ELOA3BQ3SY89 546 aa6.28□□□□□ -1.4
VPS13B-209ENST00000521559 CHSY3Q70JA7 882 aa6.28□□□□□ -1.4
VPS13B-209ENST00000521559 FCHSD1Q86WN1 690 aa6.28□□□□□ -1.4
VPS13B-209ENST00000521559 ELOA3Q8NG57 546 aa6.28□□□□□ -1.4
VPS13B-209ENST00000521559 C11orf16Q9NQ32 467 aa6.28□□□□□ -1.4
VPS13B-209ENST00000521559 KLF15Q9UIH9 416 aa6.28□□□□□ -1.4
VPS13B-209ENST00000521559 ZMIZ1Q9ULJ6 1067 aa6.28□□□□□ -1.4
VPS13B-209ENST00000521559 ADARB2-AS1A8MUL3 147 aa6.27□□□□□ -1.41
VPS13B-209ENST00000521559 GNB5O14775 395 aa6.27□□□□□ -1.41
VPS13B-209ENST00000521559 PRMT3O60678 531 aa6.27□□□□□ -1.41
VPS13B-209ENST00000521559 PTCD1O75127 700 aaKnown RBP6.27□□□□□ -1.41
VPS13B-209ENST00000521559 PPP1R15AO75807 674 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-209ENST00000521559 DGKZQ13574 1117 aa6.27□□□□□ -1.41
VPS13B-209ENST00000521559 STK32AQ8WU08 396 aa6.27□□□□□ -1.41
VPS13B-209ENST00000521559 TNFRSF25Q93038 417 aa6.27□□□□□ -1.41
VPS13B-209ENST00000521559 COL26A1Q96A83 441 aa6.27□□□□□ -1.41
VPS13B-209ENST00000521559 PRIMPOLQ96LW4 560 aa6.27□□□□□ -1.41
VPS13B-209ENST00000521559 PNMA5Q96PV4 448 aa6.27□□□□□ -1.41
VPS13B-209ENST00000521559 SLC30A3Q99726 388 aa6.27□□□□□ -1.41
VPS13B-209ENST00000521559 NOP53Q9NZM5 478 aaKnown RBP6.27□□□□□ -1.41
VPS13B-209ENST00000521559 ARSDP51689 593 aa6.26□□□□□ -1.41
VPS13B-209ENST00000521559 SNRPNP63162 240 aaKnown RBP6.26□□□□□ -1.41
VPS13B-209ENST00000521559 CLP1Q92989 425 aaKnown RBP6.26□□□□□ -1.41
VPS13B-209ENST00000521559 QTRT2Q9H974 415 aaKnown RBP6.26□□□□□ -1.41
VPS13B-209ENST00000521559 KLK14Q9P0G3 267 aa6.26□□□□□ -1.41
VPS13B-209ENST00000521559 MICAL2O94851 1124 aa6.25□□□□□ -1.41
VPS13B-209ENST00000521559 IGHA1P01876 353 aa6.25□□□□□ -1.41
VPS13B-209ENST00000521559 DGKGP49619 791 aa6.25□□□□□ -1.41
VPS13B-209ENST00000521559 IDH3AP50213 366 aa6.25□□□□□ -1.41
VPS13B-209ENST00000521559 FAM69CQ0P6D2 419 aa6.25□□□□□ -1.41
VPS13B-209ENST00000521559 FKBP5Q13451 457 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-209ENST00000521559 CCINQ13939 588 aa6.25□□□□□ -1.41
VPS13B-209ENST00000521559 OCLNQ16625 522 aa6.25□□□□□ -1.41
VPS13B-209ENST00000521559 TMEM164Q5U3C3 297 aa6.25□□□□□ -1.41
VPS13B-209ENST00000521559 CCDC82Q8N4S0 544 aa6.25□□□□□ -1.41
VPS13B-209ENST00000521559 BHMTQ93088 406 aa6.25□□□□□ -1.41
VPS13B-209ENST00000521559 IFT43Q96FT9 208 aa6.25□□□□□ -1.41
VPS13B-209ENST00000521559 CXXC1Q9P0U4 656 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-209ENST00000521559 DMGDHQ9UI17 866 aaKnown RBP6.25□□□□□ -1.41
VPS13B-209ENST00000521559 SPDYE3A6NKU9 549 aa6.24□□□□□ -1.41
VPS13B-209ENST00000521559 BRD2P25440 801 aaKnown RBP6.24□□□□□ -1.41
VPS13B-209ENST00000521559 INPP5BP32019 993 aa6.24□□□□□ -1.41
VPS13B-209ENST00000521559 PCSK7Q16549 785 aa6.24□□□□□ -1.41
VPS13B-209ENST00000521559 C16orf46Q6P387 395 aa6.24□□□□□ -1.41
VPS13B-209ENST00000521559 LINC00114Q6XXX2 140 aa6.24□□□□□ -1.41
VPS13B-209ENST00000521559 KCTD17Q8N5Z5 321 aa6.24□□□□□ -1.41
VPS13B-209ENST00000521559 BCS1LQ9Y276 419 aa6.24□□□□□ -1.41
VPS13B-209ENST00000521559 ARID4AP29374 1257 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-209ENST00000521559 ADH7P40394 386 aa6.23□□□□□ -1.41
VPS13B-209ENST00000521559 GRIN2CQ14957 1233 aa6.23□□□□□ -1.41
VPS13B-209ENST00000521559 DCAF5Q96JK2 942 aa6.23□□□□□ -1.41
VPS13B-209ENST00000521559 GSX2Q9BZM3 304 aa6.23□□□□□ -1.41
VPS13B-209ENST00000521559 UBE2OQ9C0C9 1292 aaKnown RBP6.23□□□□□ -1.41
VPS13B-209ENST00000521559 FAM13BQ9NYF5 915 aa6.23□□□□□ -1.41
VPS13B-209ENST00000521559 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-209ENST00000521559 COX20Q5RI15 118 aa6.22□□□□□ -1.41
VPS13B-209ENST00000521559 RAB44Q7Z6P3 723 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-209ENST00000521559 MDFIQ99750 246 aa6.22□□□□□ -1.41
VPS13B-209ENST00000521559 LRFN2Q9ULH4 789 aa6.22□□□□□ -1.41
VPS13B-209ENST00000521559 HOXB4P17483 251 aaPredicted RBP6.21□□□□□ -1.42
VPS13B-209ENST00000521559 ATP2B4P23634 1241 aa6.21□□□□□ -1.42
VPS13B-209ENST00000521559 TBC1D8BQ0IIM8 1120 aa6.21□□□□□ -1.42
VPS13B-209ENST00000521559 TREML1Q86YW5 311 aa6.21□□□□□ -1.42
VPS13B-209ENST00000521559 IGFLR1Q9H665 355 aa6.21□□□□□ -1.42
VPS13B-209ENST00000521559 PRDM6Q9NQX0 595 aa6.21□□□□□ -1.42
VPS13B-209ENST00000521559 M0R082 166 aa6.2□□□□□ -1.42
VPS13B-209ENST00000521559 MAP3K6O95382 1288 aa6.2□□□□□ -1.42
VPS13B-209ENST00000521559 NFKB1P19838 968 aa6.2□□□□□ -1.42
VPS13B-209ENST00000521559 GPAT2Q6NUI2 795 aa6.2□□□□□ -1.42
VPS13B-209ENST00000521559 ABTB2Q8N961 1025 aa6.2□□□□□ -1.42
VPS13B-209ENST00000521559 ZNF417Q8TAU3 575 aa6.2□□□□□ -1.42
VPS13B-209ENST00000521559 ZNF587Q96SQ5 575 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-209ENST00000521559 MKNK1Q9BUB5 465 aa6.2□□□□□ -1.42
VPS13B-209ENST00000521559 RTCBQ9Y3I0 505 aaKnown RBP6.2□□□□□ -1.42
VPS13B-209ENST00000521559 CCDC180Q9P1Z9 1646 aa6.2□□□□□ -1.42
VPS13B-209ENST00000521559 LILRB5O75023 590 aa6.19□□□□□ -1.42
VPS13B-209ENST00000521559 PRRT3Q5FWE3 981 aa6.19□□□□□ -1.42
VPS13B-209ENST00000521559 CMTR1Q8N1G2 835 aaKnown RBP6.19□□□□□ -1.42
VPS13B-209ENST00000521559 MICALL1Q8N3F8 863 aa6.19□□□□□ -1.42
VPS13B-209ENST00000521559 PIK3R5Q8WYR1 880 aa6.19□□□□□ -1.42
VPS13B-209ENST00000521559 PLVAPQ9BX97 442 aa6.19□□□□□ -1.42
VPS13B-209ENST00000521559 MSTNO14793 375 aa6.18□□□□□ -1.42
VPS13B-209ENST00000521559 OPLAHO14841 1288 aa6.18□□□□□ -1.42
VPS13B-209ENST00000521559 EGFRP00533 1210 aa6.18□□□□□ -1.42
VPS13B-209ENST00000521559 RARAP10276 462 aa6.18□□□□□ -1.42
VPS13B-209ENST00000521559 NAA30Q147X3 362 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-209ENST00000521559 PLA2G4EQ3MJ16 856 aa6.18□□□□□ -1.42
VPS13B-209ENST00000521559 RGL4Q8IZJ4 473 aa6.18□□□□□ -1.42
VPS13B-209ENST00000521559 SUV39H2Q9H5I1 410 aa6.18□□□□□ -1.42
VPS13B-209ENST00000521559 DNAJB12Q9NXW2 375 aaKnown RBP6.18□□□□□ -1.42
VPS13B-209ENST00000521559 STIM2Q9P246 746 aa6.18□□□□□ -1.42
VPS13B-209ENST00000521559 SLC6A14Q9UN76 642 aa6.18□□□□□ -1.42
VPS13B-209ENST00000521559 MTMR7Q9Y216 660 aa6.18□□□□□ -1.42
VPS13B-209ENST00000521559 FNDC3AQ9Y2H6 1198 aaKnown RBP6.18□□□□□ -1.42
VPS13B-209ENST00000521559 XYLBO75191 536 aa6.17□□□□□ -1.42
VPS13B-209ENST00000521559 ALBP02768 609 aa6.17□□□□□ -1.42
VPS13B-209ENST00000521559 SPATA31C1P0DKV0 1188 aa6.17□□□□□ -1.42
VPS13B-209ENST00000521559 COL8A1P27658 744 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms