RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 OGFRQ9NZT2 677 aa10.6□□□□□ -0.71
SHPRH-208ENST00000520752 ARHGAP31Q2M1Z3 1444 aa10.59□□□□□ -0.71
SHPRH-208ENST00000520752 HMGB1P09429 215 aaKnown RBP10.59□□□□□ -0.71
SHPRH-208ENST00000520752 KCNJ4P48050 445 aa10.59□□□□□ -0.71
SHPRH-208ENST00000520752 SMTNP53814 917 aa10.59□□□□□ -0.71
SHPRH-208ENST00000520752 EPHA4P54764 986 aa10.59□□□□□ -0.71
SHPRH-208ENST00000520752 MTFR1Q15390 333 aa10.59□□□□□ -0.71
SHPRH-208ENST00000520752 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.59□□□□□ -0.71
SHPRH-208ENST00000520752 TSEN2Q8NCE0 465 aaKnown RBP10.59□□□□□ -0.71
SHPRH-208ENST00000520752 NLRP3Q96P20 1036 aa10.59□□□□□ -0.71
SHPRH-208ENST00000520752 SERTAD1Q9UHV2 236 aa10.59□□□□□ -0.71
SHPRH-208ENST00000520752 TIAM1Q13009 1591 aa10.58□□□□□ -0.72
SHPRH-208ENST00000520752 MEN1O00255 615 aa10.58□□□□□ -0.72
SHPRH-208ENST00000520752 GPC1P35052 558 aa10.58□□□□□ -0.72
SHPRH-208ENST00000520752 CENPCQ03188 943 aa10.58□□□□□ -0.72
SHPRH-208ENST00000520752 SYCP1Q15431 976 aa10.58□□□□□ -0.72
SHPRH-208ENST00000520752 TICAM2Q86XR7 235 aa10.58□□□□□ -0.72
SHPRH-208ENST00000520752 CNPY4Q8N129 248 aa10.58□□□□□ -0.72
SHPRH-208ENST00000520752 CRBNQ96SW2 442 aa10.58□□□□□ -0.72
SHPRH-208ENST00000520752 GZF1Q9H116 711 aaPredicted RBP10.58□□□□□ -0.72
SHPRH-208ENST00000520752 AAASQ9NRG9 546 aa10.58□□□□□ -0.72
SHPRH-208ENST00000520752 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
SHPRH-208ENST00000520752 MIA2Q96PC5 1412 aa10.58□□□□□ -0.72
SHPRH-208ENST00000520752 NLRP1Q9C000 1473 aa10.57□□□□□ -0.72
SHPRH-208ENST00000520752 DHX29Q7Z478 1369 aaKnown RBP10.57□□□□□ -0.72
SHPRH-208ENST00000520752 A6NJY4 79 aa10.57□□□□□ -0.72
SHPRH-208ENST00000520752 RNF144AP50876 292 aaPredicted RBP10.57□□□□□ -0.72
SHPRH-208ENST00000520752 CBX1P83916 185 aa10.57□□□□□ -0.72
SHPRH-208ENST00000520752 SCARF1Q14162 830 aa10.57□□□□□ -0.72
SHPRH-208ENST00000520752 TRIM46Q7Z4K8 759 aa10.57□□□□□ -0.72
SHPRH-208ENST00000520752 HINFPQ9BQA5 517 aa10.57□□□□□ -0.72
SHPRH-208ENST00000520752 FHDC1Q9C0D6 1143 aaPredicted RBP10.57□□□□□ -0.72
SHPRH-208ENST00000520752 SLKQ9H2G2 1235 aaPredicted RBP10.57□□□□□ -0.72
SHPRH-208ENST00000520752 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
SHPRH-208ENST00000520752 BMP2P12643 396 aa10.56□□□□□ -0.72
SHPRH-208ENST00000520752 ZNF445P59923 1031 aa10.56□□□□□ -0.72
SHPRH-208ENST00000520752 FOXK2Q01167 660 aa10.56□□□□□ -0.72
SHPRH-208ENST00000520752 TNS4Q8IZW8 715 aa10.56□□□□□ -0.72
SHPRH-208ENST00000520752 TMC1Q8TDI8 760 aa10.56□□□□□ -0.72
SHPRH-208ENST00000520752 TBC1D32Q96NH3 1257 aa10.56□□□□□ -0.72
SHPRH-208ENST00000520752 INSM2Q96T92 566 aaPredicted RBP10.56□□□□□ -0.72
SHPRH-208ENST00000520752 SCHIP1Q9P0W5 487 aaPredicted RBP10.56□□□□□ -0.72
SHPRH-208ENST00000520752 CFAP65Q6ZU64 1925 aaKnown RBP10.56□□□□□ -0.72
SHPRH-208ENST00000520752 CDK2AP1O14519 115 aa10.55□□□□□ -0.72
SHPRH-208ENST00000520752 WEE1P30291 646 aa10.55□□□□□ -0.72
SHPRH-208ENST00000520752 GRIP2Q9C0E4 1043 aa10.55□□□□□ -0.72
SHPRH-208ENST00000520752 BRMS1Q9HCU9 246 aa10.55□□□□□ -0.72
SHPRH-208ENST00000520752 SLAIN2Q9P270 581 aa10.55□□□□□ -0.72
SHPRH-208ENST00000520752 NCOA3Q9Y6Q9 1424 aa10.55□□□□□ -0.72
SHPRH-208ENST00000520752 RAD50Q92878 1312 aa10.55□□□□□ -0.72
SHPRH-208ENST00000520752 GOLGA6L22H0YM25 854 aa10.54□□□□□ -0.72
SHPRH-208ENST00000520752 ST8SIA5O15466 376 aa10.54□□□□□ -0.72
SHPRH-208ENST00000520752 BMP1P13497 986 aa10.54□□□□□ -0.72
SHPRH-208ENST00000520752 TLR1Q15399 786 aa10.54□□□□□ -0.72
SHPRH-208ENST00000520752 C6orf118Q5T5N4 469 aa10.54□□□□□ -0.72
SHPRH-208ENST00000520752 CLEC17AQ6ZS10 378 aa10.54□□□□□ -0.72
SHPRH-208ENST00000520752 GAS2L2Q8NHY3 880 aa10.54□□□□□ -0.72
SHPRH-208ENST00000520752 IQSEC3Q9UPP2 1182 aaPredicted RBP10.54□□□□□ -0.72
SHPRH-208ENST00000520752 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
SHPRH-208ENST00000520752 PRDM2Q13029 1718 aa10.53□□□□□ -0.72
SHPRH-208ENST00000520752 SPATA31E1Q6ZUB1 1445 aa10.53□□□□□ -0.72
SHPRH-208ENST00000520752 CTSOP43234 321 aaPredicted RBP10.53□□□□□ -0.72
SHPRH-208ENST00000520752 KIAA2012Q0VF49 1180 aa10.53□□□□□ -0.72
SHPRH-208ENST00000520752 OCLNQ16625 522 aa10.53□□□□□ -0.72
SHPRH-208ENST00000520752 GAS2L3Q86XJ1 694 aa10.53□□□□□ -0.72
SHPRH-208ENST00000520752 PURBQ96QR8 312 aaKnown RBP10.53□□□□□ -0.72
SHPRH-208ENST00000520752 MYCBPQ99417 103 aaPredicted RBP10.53□□□□□ -0.72
SHPRH-208ENST00000520752 CARD10Q9BWT7 1032 aa10.53□□□□□ -0.72
SHPRH-208ENST00000520752 ATP13A2Q9NQ11 1180 aa10.53□□□□□ -0.72
SHPRH-208ENST00000520752 PRXQ9BXM0 1461 aa10.53□□□□□ -0.72
SHPRH-208ENST00000520752 HFM1A2PYH4 1435 aa10.52□□□□□ -0.73
SHPRH-208ENST00000520752 IGFBP4P22692 258 aa10.52□□□□□ -0.73
SHPRH-208ENST00000520752 SSFA2P28290 1259 aa10.52□□□□□ -0.73
SHPRH-208ENST00000520752 ATP2B3Q16720 1220 aa10.52□□□□□ -0.73
SHPRH-208ENST00000520752 FOXD4L5Q5VV16 416 aaPredicted RBP10.52□□□□□ -0.73
SHPRH-208ENST00000520752 ANKRD7Q92527 254 aa10.52□□□□□ -0.73
SHPRH-208ENST00000520752 ZFP42Q96MM3 310 aa10.52□□□□□ -0.73
SHPRH-208ENST00000520752 ZSCAN10Q96SZ4 725 aaPredicted RBP10.52□□□□□ -0.73
SHPRH-208ENST00000520752 POLMQ9NP87 494 aaPredicted RBP10.52□□□□□ -0.73
SHPRH-208ENST00000520752 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.73
SHPRH-208ENST00000520752 LRRC9Q6ZRR7 1453 aa10.51□□□□□ -0.73
SHPRH-208ENST00000520752 CLSTN1O94985 981 aa10.51□□□□□ -0.73
SHPRH-208ENST00000520752 BRD1O95696 1058 aa10.51□□□□□ -0.73
SHPRH-208ENST00000520752 XPCQ01831 940 aaPredicted RBP10.51□□□□□ -0.73
SHPRH-208ENST00000520752 LMOD3Q0VAK6 560 aa10.51□□□□□ -0.73
SHPRH-208ENST00000520752 KLHL40Q2TBA0 621 aa10.51□□□□□ -0.73
SHPRH-208ENST00000520752 C1orf216Q8TAB5 229 aa10.51□□□□□ -0.73
SHPRH-208ENST00000520752 TSPAN10Q9H1Z9 355 aaPredicted RBP10.51□□□□□ -0.73
SHPRH-208ENST00000520752 KCNG1Q9UIX4 513 aa10.51□□□□□ -0.73
SHPRH-208ENST00000520752 SOS2Q07890 1332 aaPredicted RBP10.51□□□□□ -0.73
SHPRH-208ENST00000520752 KIF7Q2M1P5 1343 aa10.51□□□□□ -0.73
SHPRH-208ENST00000520752 ATAD2Q6PL18 1390 aa10.51□□□□□ -0.73
SHPRH-208ENST00000520752 TTLL8A6PVC2 850 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 C21orf2O43822 256 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 ATP2B4P23634 1241 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 DDIT3P35638 169 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 HSP90AB3PQ58FF7 597 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 SLC27A3Q5K4L6 730 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 PHLDB3Q6NSJ2 640 aa10.5□□□□□ -0.73
SHPRH-208ENST00000520752 ZNF295-AS1Q8N0V1 137 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms