RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 ERBB4Q15303 1308 aa31.13■■■□□ 2.57
COL13A1-213ENST00000520267 RABL6Q3YEC7 729 aaPredicted RBP31.13■■■□□ 2.57
COL13A1-213ENST00000520267 COL15A1P39059 1388 aa31.12■■■□□ 2.57
COL13A1-213ENST00000520267 CASP7P55210 303 aa31.12■■■□□ 2.57
COL13A1-213ENST00000520267 PTH1RQ03431 593 aa31.12■■■□□ 2.57
COL13A1-213ENST00000520267 PTPN12Q05209 780 aaKnown RBP31.12■■■□□ 2.57
COL13A1-213ENST00000520267 INTS4Q96HW7 963 aaKnown RBP31.12■■■□□ 2.57
COL13A1-213ENST00000520267 EVA1CP58658 441 aa31.1■■■□□ 2.57
COL13A1-213ENST00000520267 TTLL7Q6ZT98 887 aa31.1■■■□□ 2.57
COL13A1-213ENST00000520267 BOLA2Q9H3K6 86 aa31.1■■■□□ 2.57
COL13A1-213ENST00000520267 A1BGP04217 495 aa31.1■■■□□ 2.57
COL13A1-213ENST00000520267 NUP188Q5SRE5 1749 aa31.1■■■□□ 2.57
COL13A1-213ENST00000520267 RTN4Q9NQC3 1192 aaKnown RBP31.09■■■□□ 2.57
COL13A1-213ENST00000520267 TTC14Q96N46 770 aa31.09■■■□□ 2.57
COL13A1-213ENST00000520267 NHSL1Q5SYE7 1610 aa31.08■■■□□ 2.57
COL13A1-213ENST00000520267 LMBRD1Q9NUN5 540 aa31.08■■■□□ 2.57
COL13A1-213ENST00000520267 DDX49Q9Y6V7 483 aaKnown RBP31.08■■■□□ 2.57
COL13A1-213ENST00000520267 KLHL40Q2TBA0 621 aa31.08■■■□□ 2.57
COL13A1-213ENST00000520267 FAM227BQ96M60 508 aa31.07■■■□□ 2.56
COL13A1-213ENST00000520267 TFCP2Q12800 502 aa31.06■■■□□ 2.56
COL13A1-213ENST00000520267 NMIQ13287 307 aaPredicted RBP31.06■■■□□ 2.56
COL13A1-213ENST00000520267 FOXD4L5Q5VV16 416 aaPredicted RBP31.06■■■□□ 2.56
COL13A1-213ENST00000520267 FOXD4L4Q8WXT5 416 aaPredicted RBP31.06■■■□□ 2.56
COL13A1-213ENST00000520267 TOGARAM1Q9Y4F4 1720 aa31.06■■■□□ 2.56
COL13A1-213ENST00000520267 MRE11P49959 708 aa31.05■■■□□ 2.56
COL13A1-213ENST00000520267 GAS2L3Q86XJ1 694 aa31.05■■■□□ 2.56
COL13A1-213ENST00000520267 CHAMP1Q96JM3 812 aa31.05■■■□□ 2.56
COL13A1-213ENST00000520267 PANK2Q9BZ23 570 aa31.05■■■□□ 2.56
COL13A1-213ENST00000520267 H7C1W4 665 aa31.05■■■□□ 2.56
COL13A1-213ENST00000520267 TNS2Q63HR2 1409 aa31.04■■■□□ 2.56
COL13A1-213ENST00000520267 HIP1O00291 1037 aa31.04■■■□□ 2.56
COL13A1-213ENST00000520267 BRD1O95696 1058 aa31.04■■■□□ 2.56
COL13A1-213ENST00000520267 TNNI3KQ59H18 835 aa31.04■■■□□ 2.56
COL13A1-213ENST00000520267 FPGT-TNNI3KV9GXZ4 949 aa31.04■■■□□ 2.56
COL13A1-213ENST00000520267 AK2P54819 239 aa31.04■■■□□ 2.56
COL13A1-213ENST00000520267 PRPF40BQ6NWY9 871 aaKnown RBP31.04■■■□□ 2.56
COL13A1-213ENST00000520267 LMBR1LQ6UX01 489 aa31.04■■■□□ 2.56
COL13A1-213ENST00000520267 CCDC171Q6TFL3 1326 aa31.04■■■□□ 2.56
COL13A1-213ENST00000520267 TJP1Q07157 1748 aa31.03■■■□□ 2.56
COL13A1-213ENST00000520267 FOXO4P98177 505 aa31.03■■■□□ 2.56
COL13A1-213ENST00000520267 GRPEL1Q9HAV7 217 aa31.03■■■□□ 2.56
COL13A1-213ENST00000520267 DBNLQ9UJU6 430 aaKnown RBP31.03■■■□□ 2.56
COL13A1-213ENST00000520267 ISY1Q9ULR0 285 aaKnown RBP31.03■■■□□ 2.56
COL13A1-213ENST00000520267 CPA1P15085 419 aa31.03■■■□□ 2.56
COL13A1-213ENST00000520267 FSD1Q9BTV5 496 aa31.03■■■□□ 2.56
COL13A1-213ENST00000520267 KCNB2Q92953 911 aa31.02■■■□□ 2.56
COL13A1-213ENST00000520267 ZBTB3Q9H5J0 574 aa31.02■■■□□ 2.56
COL13A1-213ENST00000520267 CASTP20810 708 aaKnown RBP31.01■■■□□ 2.56
COL13A1-213ENST00000520267 CWC25Q9NXE8 425 aaPredicted RBP31.01■■■□□ 2.56
COL13A1-213ENST00000520267 NECTIN1Q15223 517 aa31.01■■■□□ 2.55
COL13A1-213ENST00000520267 ADCK5Q3MIX3 580 aa31.01■■■□□ 2.55
COL13A1-213ENST00000520267 A0A0D9SFI3 127 aa31■■■□□ 2.55
COL13A1-213ENST00000520267 PRPF40AO75400 957 aaKnown RBP31■■■□□ 2.55
COL13A1-213ENST00000520267 RUFY3Q7L099 469 aa31■■■□□ 2.55
COL13A1-213ENST00000520267 SNRKQ9NRH2 765 aa31■■■□□ 2.55
COL13A1-213ENST00000520267 EDC3Q96F86 508 aaKnown RBP31■■■□□ 2.55
COL13A1-213ENST00000520267 LARP6Q9BRS8 491 aaKnown RBP31■■■□□ 2.55
COL13A1-213ENST00000520267 RBM8AQ9Y5S9 174 aaKnown RBP30.99■■■□□ 2.55
COL13A1-213ENST00000520267 ATP5JP18859 108 aa30.99■■■□□ 2.55
COL13A1-213ENST00000520267 MAP4K1Q92918 833 aa30.98■■■□□ 2.55
COL13A1-213ENST00000520267 JAKMIP1Q96N16 626 aaKnown RBP30.98■■■□□ 2.55
COL13A1-213ENST00000520267 CHMP3Q9Y3E7 222 aa30.98■■■□□ 2.55
COL13A1-213ENST00000520267 LIMCH1Q9UPQ0 1083 aa30.98■■■□□ 2.55
COL13A1-213ENST00000520267 TMOD3Q9NYL9 352 aa30.97■■■□□ 2.55
COL13A1-213ENST00000520267 DBNDD2Q9BQY9 259 aa30.96■■■□□ 2.55
COL13A1-213ENST00000520267 NCLP19338 710 aaKnown RBP30.96■■■□□ 2.55
COL13A1-213ENST00000520267 CREB3L3Q68CJ9 461 aa30.96■■■□□ 2.55
COL13A1-213ENST00000520267 ZSWIM6Q9HCJ5 1215 aa30.96■■■□□ 2.55
COL13A1-213ENST00000520267 TM6SF1Q9BZW5 370 aa30.95■■■□□ 2.55
COL13A1-213ENST00000520267 MED23Q9ULK4 1368 aa30.95■■■□□ 2.55
COL13A1-213ENST00000520267 CCDC191Q8NCU4 936 aa30.95■■■□□ 2.54
COL13A1-213ENST00000520267 PDRG1Q9NUG6 133 aa30.94■■■□□ 2.54
COL13A1-213ENST00000520267 BTG4Q9NY30 223 aa30.94■■■□□ 2.54
COL13A1-213ENST00000520267 KCNJ4P48050 445 aa30.94■■■□□ 2.54
COL13A1-213ENST00000520267 GPT2Q8TD30 523 aa30.94■■■□□ 2.54
COL13A1-213ENST00000520267 NDUFB9Q9Y6M9 179 aa30.94■■■□□ 2.54
COL13A1-213ENST00000520267 VPS53Q5VIR6 699 aa30.93■■■□□ 2.54
COL13A1-213ENST00000520267 CAVIN1Q6NZI2 390 aaKnown RBP30.93■■■□□ 2.54
COL13A1-213ENST00000520267 LARGE1O95461 756 aa30.93■■■□□ 2.54
COL13A1-213ENST00000520267 ZKSCAN1P17029 563 aaPredicted RBP30.93■■■□□ 2.54
COL13A1-213ENST00000520267 ATG9AQ7Z3C6 839 aa30.93■■■□□ 2.54
COL13A1-213ENST00000520267 CYP46A1Q9Y6A2 500 aa30.93■■■□□ 2.54
COL13A1-213ENST00000520267 ZNF589Q86UQ0 364 aaPredicted RBP30.92■■■□□ 2.54
COL13A1-213ENST00000520267 ASAP1Q9ULH1 1129 aa30.92■■■□□ 2.54
COL13A1-213ENST00000520267 RPAP1Q9BWH6 1393 aaPredicted RBP30.92■■■□□ 2.54
COL13A1-213ENST00000520267 SLC27A2O14975 620 aa30.91■■■□□ 2.54
COL13A1-213ENST00000520267 PIGBQ92521 554 aa30.91■■■□□ 2.54
COL13A1-213ENST00000520267 ITGB4P16144 1822 aa30.89■■■□□ 2.54
COL13A1-213ENST00000520267 DNAJC2Q99543 621 aaKnown RBP30.89■■■□□ 2.54
COL13A1-213ENST00000520267 DNAJC10Q8IXB1 793 aa30.89■■■□□ 2.53
COL13A1-213ENST00000520267 HAUS7Q99871 368 aa30.89■■■□□ 2.53
COL13A1-213ENST00000520267 ISCA1Q9BUE6 129 aa30.89■■■□□ 2.53
COL13A1-213ENST00000520267 ZNF330Q9Y3S2 320 aaPredicted RBP30.89■■■□□ 2.53
COL13A1-213ENST00000520267 WDR33Q9C0J8 1336 aaKnown RBP30.89■■■□□ 2.53
COL13A1-213ENST00000520267 JCADQ9P266 1359 aa30.88■■■□□ 2.53
COL13A1-213ENST00000520267 ZSCAN23Q3MJ62 389 aa30.87■■■□□ 2.53
COL13A1-213ENST00000520267 CCDC9Q9Y3X0 531 aaKnown RBP30.87■■■□□ 2.53
COL13A1-213ENST00000520267 COL9A3Q14050 684 aaPredicted RBP30.87■■■□□ 2.53
COL13A1-213ENST00000520267 ZNF594Q96JF6 807 aaPredicted RBP30.87■■■□□ 2.53
COL13A1-213ENST00000520267 ATG3Q9NT62 314 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms