RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 UBN2Q6ZU65 1347 aa26.93■■□□□ 1.9
PTP4A3-203ENST00000520105 BCORQ6W2J9 1755 aa26.92■■□□□ 1.9
PTP4A3-203ENST00000520105 H7C1W4 665 aa26.92■■□□□ 1.9
PTP4A3-203ENST00000520105 CEP85Q6P2H3 762 aa26.92■■□□□ 1.9
PTP4A3-203ENST00000520105 ANKRD36CQ5JPF3 1778 aa26.92■■□□□ 1.9
PTP4A3-203ENST00000520105 SUCLG2Q96I99 432 aa26.91■■□□□ 1.9
PTP4A3-203ENST00000520105 NIP7Q9Y221 180 aaKnown RBP eCLIP26.91■■□□□ 1.9
PTP4A3-203ENST00000520105 USP42Q9H9J4 1324 aaKnown RBP26.91■■□□□ 1.9
PTP4A3-203ENST00000520105 C4AP0C0L4 1744 aa26.91■■□□□ 1.9
PTP4A3-203ENST00000520105 CASP7P55210 303 aa26.9■■□□□ 1.9
PTP4A3-203ENST00000520105 KAZALD1Q96I82 304 aa26.9■■□□□ 1.9
PTP4A3-203ENST00000520105 RWDD1Q9H446 243 aaPredicted RBP26.9■■□□□ 1.9
PTP4A3-203ENST00000520105 RPAP2Q8IXW5 612 aaPredicted RBP26.89■■□□□ 1.9
PTP4A3-203ENST00000520105 ANKRD44Q8N8A2 993 aa26.89■■□□□ 1.9
PTP4A3-203ENST00000520105 ANO8Q9HCE9 1232 aaPredicted RBP26.89■■□□□ 1.9
PTP4A3-203ENST00000520105 HDAC1Q13547 482 aaPredicted RBP26.89■■□□□ 1.89
PTP4A3-203ENST00000520105 TBC1D9BQ66K14 1250 aa26.89■■□□□ 1.89
PTP4A3-203ENST00000520105 BICDL1Q6ZP65 573 aa26.89■■□□□ 1.89
PTP4A3-203ENST00000520105 FAM89AQ96GI7 184 aa26.89■■□□□ 1.89
PTP4A3-203ENST00000520105 KDM2BQ8NHM5 1336 aa26.89■■□□□ 1.89
PTP4A3-203ENST00000520105 FAM177BA6PVY3 158 aa26.88■■□□□ 1.89
PTP4A3-203ENST00000520105 SCN7AQ01118 1682 aa26.88■■□□□ 1.89
PTP4A3-203ENST00000520105 SUSD4Q5VX71 490 aa26.87■■□□□ 1.89
PTP4A3-203ENST00000520105 SYNE4Q8N205 404 aa26.87■■□□□ 1.89
PTP4A3-203ENST00000520105 HDAC5Q9UQL6 1122 aa26.87■■□□□ 1.89
PTP4A3-203ENST00000520105 RGL2O15211 777 aa26.87■■□□□ 1.89
PTP4A3-203ENST00000520105 COL23A1Q86Y22 540 aaPredicted RBP26.87■■□□□ 1.89
PTP4A3-203ENST00000520105 BICC1Q9H694 974 aaKnown RBP26.87■■□□□ 1.89
PTP4A3-203ENST00000520105 TRMT112Q9UI30 125 aaKnown RBP26.87■■□□□ 1.89
PTP4A3-203ENST00000520105 PNMA6EA0A0J9YXQ4 647 aa26.86■■□□□ 1.89
PTP4A3-203ENST00000520105 PCCAP05165 728 aaPredicted RBP26.86■■□□□ 1.89
PTP4A3-203ENST00000520105 ATP8B2P98198 1209 aa26.86■■□□□ 1.89
PTP4A3-203ENST00000520105 EPHA10Q5JZY3 1008 aa26.86■■□□□ 1.89
PTP4A3-203ENST00000520105 ZBTB38Q8NAP3 1195 aaPredicted RBP26.86■■□□□ 1.89
PTP4A3-203ENST00000520105 SLC15A2Q16348 729 aa26.85■■□□□ 1.89
PTP4A3-203ENST00000520105 PARP10Q53GL7 1025 aa26.85■■□□□ 1.89
PTP4A3-203ENST00000520105 TUBGCP6Q96RT7 1819 aa26.85■■□□□ 1.89
PTP4A3-203ENST00000520105 MSH5O43196 834 aa26.85■■□□□ 1.89
PTP4A3-203ENST00000520105 CENPQQ7L2Z9 268 aaPredicted RBP26.85■■□□□ 1.89
PTP4A3-203ENST00000520105 UPF1Q92900 1129 aaKnown RBP eCLIP26.85■■□□□ 1.899e-7■■■■□ 25.3
PTP4A3-203ENST00000520105 GYS1P13807 737 aa26.84■■□□□ 1.89
PTP4A3-203ENST00000520105 PPP1R42Q7Z4L9 355 aa26.84■■□□□ 1.89
PTP4A3-203ENST00000520105 STK32BQ9NY57 414 aa26.84■■□□□ 1.89
PTP4A3-203ENST00000520105 PNPLA7Q6ZV29 1317 aa26.83■■□□□ 1.89
PTP4A3-203ENST00000520105 UTP14AQ9BVJ6 771 aaKnown RBP26.83■■□□□ 1.88
PTP4A3-203ENST00000520105 FLAD1Q8NFF5 587 aa26.82■■□□□ 1.88
PTP4A3-203ENST00000520105 SETDB2Q96T68 719 aa26.82■■□□□ 1.88
PTP4A3-203ENST00000520105 SRGAP3O43295 1099 aa26.81■■□□□ 1.88
PTP4A3-203ENST00000520105 FOXO4P98177 505 aa26.81■■□□□ 1.88
PTP4A3-203ENST00000520105 NTSR2O95665 410 aa26.8■■□□□ 1.88
PTP4A3-203ENST00000520105 HMMRO75330 724 aa26.79■■□□□ 1.88
PTP4A3-203ENST00000520105 MTX1Q13505 466 aa26.79■■□□□ 1.88
PTP4A3-203ENST00000520105 NFIXQ14938 502 aa26.79■■□□□ 1.88
PTP4A3-203ENST00000520105 NUTM1Q86Y26 1132 aa26.79■■□□□ 1.88
PTP4A3-203ENST00000520105 IRS4O14654 1257 aaPredicted RBP26.79■■□□□ 1.88
PTP4A3-203ENST00000520105 SSH3Q8TE77 659 aa26.79■■□□□ 1.88
PTP4A3-203ENST00000520105 SH3TC1Q8TE82 1336 aa26.78■■□□□ 1.88
PTP4A3-203ENST00000520105 CDHR2Q9BYE9 1310 aa26.78■■□□□ 1.88
PTP4A3-203ENST00000520105 LMBR1LQ6UX01 489 aa26.78■■□□□ 1.88
PTP4A3-203ENST00000520105 POLA2Q14181 598 aa26.77■■□□□ 1.88
PTP4A3-203ENST00000520105 RABL6Q3YEC7 729 aaPredicted RBP26.77■■□□□ 1.88
PTP4A3-203ENST00000520105 SMC5Q8IY18 1101 aa26.76■■□□□ 1.88
PTP4A3-203ENST00000520105 DCTPP1Q9H773 170 aa26.76■■□□□ 1.88
PTP4A3-203ENST00000520105 HCLS1P14317 486 aaPredicted RBP26.76■■□□□ 1.87
PTP4A3-203ENST00000520105 PLA2G12BQ9BX93 195 aa26.76■■□□□ 1.87
PTP4A3-203ENST00000520105 ILDR2Q71H61 639 aa26.75■■□□□ 1.87
PTP4A3-203ENST00000520105 NBPF5PQ86XG9 351 aaPredicted RBP26.75■■□□□ 1.87
PTP4A3-203ENST00000520105 TM4SF1P30408 202 aa26.74■■□□□ 1.87
PTP4A3-203ENST00000520105 ERFEQ4G0M1 354 aa26.74■■□□□ 1.87
PTP4A3-203ENST00000520105 CHMP3Q9Y3E7 222 aa26.74■■□□□ 1.87
PTP4A3-203ENST00000520105 GTF2E1P29083 439 aaPredicted RBP26.73■■□□□ 1.87
PTP4A3-203ENST00000520105 SKAP1Q86WV1 359 aa26.73■■□□□ 1.87
PTP4A3-203ENST00000520105 GCC1Q96CN9 775 aa26.73■■□□□ 1.87
PTP4A3-203ENST00000520105 CCDC85AQ96PX6 553 aaPredicted RBP26.73■■□□□ 1.87
PTP4A3-203ENST00000520105 PDE8AO60658 829 aa26.72■■□□□ 1.87
PTP4A3-203ENST00000520105 TPTE2Q6XPS3 522 aa26.72■■□□□ 1.87
PTP4A3-203ENST00000520105 NLGN1Q8N2Q7 840 aa26.72■■□□□ 1.87
PTP4A3-203ENST00000520105 NYXQ9GZU5 481 aa26.72■■□□□ 1.87
PTP4A3-203ENST00000520105 EXOC6BQ9Y2D4 811 aa26.72■■□□□ 1.87
PTP4A3-203ENST00000520105 CARMIL3Q8ND23 1372 aa26.72■■□□□ 1.87
PTP4A3-203ENST00000520105 CCDC24Q8N4L8 307 aa26.72■■□□□ 1.87
PTP4A3-203ENST00000520105 PDGFDQ9GZP0 370 aaPredicted RBP26.72■■□□□ 1.87
PTP4A3-203ENST00000520105 PA2G4Q9UQ80 394 aaKnown RBP26.72■■□□□ 1.87
PTP4A3-203ENST00000520105 COL24A1Q17RW2 1714 aa26.71■■□□□ 1.87
PTP4A3-203ENST00000520105 APBB1O00213 710 aa26.7■■□□□ 1.87
PTP4A3-203ENST00000520105 SURF6O75683 361 aaKnown RBP26.7■■□□□ 1.87
PTP4A3-203ENST00000520105 CSF1RP07333 972 aa26.7■■□□□ 1.87
PTP4A3-203ENST00000520105 MSL1Q68DK7 614 aa26.7■■□□□ 1.87
PTP4A3-203ENST00000520105 TTLL11Q8NHH1 800 aa26.7■■□□□ 1.87
PTP4A3-203ENST00000520105 KLHDC4Q8TBB5 520 aa26.7■■□□□ 1.87
PTP4A3-203ENST00000520105 PDZRN3Q9UPQ7 1066 aa26.7■■□□□ 1.87
PTP4A3-203ENST00000520105 CTSWP56202 376 aa26.7■■□□□ 1.86
PTP4A3-203ENST00000520105 DDR1Q08345 913 aa26.7■■□□□ 1.86
PTP4A3-203ENST00000520105 RFX5P48382 616 aaPredicted RBP26.69■■□□□ 1.86
PTP4A3-203ENST00000520105 ANKRD45Q5TZF3 282 aa26.69■■□□□ 1.86
PTP4A3-203ENST00000520105 QSER1Q2KHR3 1735 aa26.68■■□□□ 1.86
PTP4A3-203ENST00000520105 NPHP1O15259 732 aa26.68■■□□□ 1.86
PTP4A3-203ENST00000520105 SERPINB2P05120 415 aa26.68■■□□□ 1.86
PTP4A3-203ENST00000520105 MYH3P11055 1940 aa26.68■■□□□ 1.86
PTP4A3-203ENST00000520105 FAM161AQ3B820 660 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms