RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 NEUROD1Q13562 356 aa6.76□□□□□ -1.33
AC055854.1-202ENST00000519624 TNIP1Q15025 636 aa6.76□□□□□ -1.33
AC055854.1-202ENST00000519624 NOM1Q5C9Z4 860 aaKnown RBP6.76□□□□□ -1.33
AC055854.1-202ENST00000519624 SUPT20HQ8NEM7 779 aa6.76□□□□□ -1.33
AC055854.1-202ENST00000519624 ZNF296Q8WUU4 475 aaPredicted RBP6.76□□□□□ -1.33
AC055854.1-202ENST00000519624 TESK2Q96S53 571 aa6.76□□□□□ -1.33
AC055854.1-202ENST00000519624 CSRNP1Q96S65 589 aa6.76□□□□□ -1.33
AC055854.1-202ENST00000519624 COLQQ9Y215 455 aaPredicted RBP6.76□□□□□ -1.33
AC055854.1-202ENST00000519624 PPIP5K2O43314 1243 aa6.75□□□□□ -1.33
AC055854.1-202ENST00000519624 SLC39A6Q13433 755 aa6.75□□□□□ -1.33
AC055854.1-202ENST00000519624 USP48Q86UV5 1035 aa6.75□□□□□ -1.33
AC055854.1-202ENST00000519624 DZIP3Q86Y13 1208 aaKnown RBP6.75□□□□□ -1.33
AC055854.1-202ENST00000519624 ZNRF3Q9ULT6 936 aa6.75□□□□□ -1.33
AC055854.1-202ENST00000519624 SLX4Q8IY92 1834 aa6.75□□□□□ -1.33
AC055854.1-202ENST00000519624 TRPM7Q96QT4 1865 aa6.75□□□□□ -1.33
AC055854.1-202ENST00000519624 PITPNM2Q9BZ72 1349 aa6.75□□□□□ -1.33
AC055854.1-202ENST00000519624 BCORQ6W2J9 1755 aa6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 ARFGEF2Q9Y6D5 1785 aa6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 NPC1L1Q9UHC9 1359 aa6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 RGL2O15211 777 aa6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 CAMTA2O94983 1202 aa6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 GMPSP49915 693 aaPredicted RBP6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 OLFM4Q6UX06 510 aa6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 KRT26Q7Z3Y9 468 aa6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 RPGRQ92834 1020 aaKnown RBP6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 DCPSQ96C86 337 aaKnown RBP6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 NYXQ9GZU5 481 aa6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 ANKRD31Q8N7Z5 1873 aa6.74□□□□□ -1.33
AC055854.1-202ENST00000519624 GPR25O00155 361 aa6.73□□□□□ -1.33
AC055854.1-202ENST00000519624 FKTNO75072 461 aa6.73□□□□□ -1.33
AC055854.1-202ENST00000519624 TNNT2P45379 298 aaPredicted RBP6.73□□□□□ -1.33
AC055854.1-202ENST00000519624 CXCL9Q07325 125 aa6.73□□□□□ -1.33
AC055854.1-202ENST00000519624 SULT6B1Q6IMI4 303 aa6.73□□□□□ -1.33
AC055854.1-202ENST00000519624 CNOT7Q9UIV1 285 aaKnown RBP6.73□□□□□ -1.33
AC055854.1-202ENST00000519624 NIP7Q9Y221 180 aaKnown RBP eCLIP6.73□□□□□ -1.33
AC055854.1-202ENST00000519624 SCN7AQ01118 1682 aa6.72□□□□□ -1.33
AC055854.1-202ENST00000519624 KIF20BQ96Q89 1820 aa6.72□□□□□ -1.33
AC055854.1-202ENST00000519624 RNMTO43148 476 aaKnown RBP6.72□□□□□ -1.33
AC055854.1-202ENST00000519624 TBC1D8O95759 1140 aa6.72□□□□□ -1.33
AC055854.1-202ENST00000519624 FKBP1BP68106 108 aa6.72□□□□□ -1.33
AC055854.1-202ENST00000519624 SREBF2Q12772 1141 aa6.72□□□□□ -1.33
AC055854.1-202ENST00000519624 SULF1Q8IWU6 871 aa6.72□□□□□ -1.33
AC055854.1-202ENST00000519624 RBM17Q96I25 401 aaKnown RBP6.72□□□□□ -1.33
AC055854.1-202ENST00000519624 SIN3AQ96ST3 1273 aa6.72□□□□□ -1.33
AC055854.1-202ENST00000519624 TMEM106CQ9BVX2 250 aa6.72□□□□□ -1.33
AC055854.1-202ENST00000519624 MRC1P22897 1456 aa6.72□□□□□ -1.33
AC055854.1-202ENST00000519624 HEG1Q9ULI3 1381 aa6.71□□□□□ -1.33
AC055854.1-202ENST00000519624 SNED1Q8TER0 1413 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 POTEFA5A3E0 1075 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 PPEF1O14829 653 aaPredicted RBP6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 ALDH1A1P00352 501 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 HIRAP54198 1017 aaPredicted RBP6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 TEFQ10587 303 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 AOC3Q16853 763 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 CRY2Q49AN0 593 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 ANKRD13DQ6ZTN6 518 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 RASAL3Q86YV0 1011 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 TRPM4Q8TD43 1214 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 DPF2Q92785 391 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 FMNL2Q96PY5 1086 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 CARD14Q9BXL6 1004 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 LGR6Q9HBX8 967 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 KIF7Q2M1P5 1343 aa6.71□□□□□ -1.34
AC055854.1-202ENST00000519624 HOXA10P31260 410 aaPredicted RBP6.7□□□□□ -1.34
AC055854.1-202ENST00000519624 ZNF790Q6PG37 636 aa6.7□□□□□ -1.34
AC055854.1-202ENST00000519624 AEBP1Q8IUX7 1158 aa6.7□□□□□ -1.34
AC055854.1-202ENST00000519624 MICALL2Q8IY33 904 aa6.7□□□□□ -1.34
AC055854.1-202ENST00000519624 ZNF496Q96IT1 587 aaPredicted RBP6.7□□□□□ -1.34
AC055854.1-202ENST00000519624 CRAMP1Q96RY5 1269 aa6.7□□□□□ -1.34
AC055854.1-202ENST00000519624 CFHR5Q9BXR6 569 aa6.7□□□□□ -1.34
AC055854.1-202ENST00000519624 TRIM17Q9Y577 477 aa6.7□□□□□ -1.34
AC055854.1-202ENST00000519624 COL4A5P29400 1685 aa6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 FAM177BA6PVY3 158 aa6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 H0YGN5 161 aa6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 RAD17O75943 681 aa6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 A1BGP04217 495 aa6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 EN2P19622 333 aaPredicted RBP6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 RPS12P25398 132 aaKnown RBP6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 TM4SF4P48230 202 aa6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 DPP8Q6V1X1 898 aaPredicted RBP6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 CHRDL2Q6WN34 429 aa6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 NBPF11Q86T75 865 aa6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 OTUD5Q96G74 571 aa6.69□□□□□ -1.34
AC055854.1-202ENST00000519624 CACNA1SQ13698 1873 aa6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 A0A1W2PPC1 479 aa6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 ADM5C9JUS6 153 aa6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 TCERG1O14776 1098 aaKnown RBP6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 KIAA2012Q0VF49 1180 aa6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 ARHGEF6Q15052 776 aa6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 TBC1D10BQ4KMP7 808 aaPredicted RBP6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 ARMC5Q96C12 935 aa6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 ERO1AQ96HE7 468 aa6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 RTFDC1Q9BY42 306 aaPredicted RBP6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 RBM27Q9P2N5 1060 aaKnown RBP6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 ATP6V0A2Q9Y487 856 aa6.68□□□□□ -1.34
AC055854.1-202ENST00000519624 PRAMEF22A3QJZ6 481 aa6.67□□□□□ -1.34
AC055854.1-202ENST00000519624 NF2P35240 595 aa6.67□□□□□ -1.34
AC055854.1-202ENST00000519624 INHBEP58166 350 aa6.67□□□□□ -1.34
AC055854.1-202ENST00000519624 TCIRG1Q13488 830 aa6.67□□□□□ -1.34
AC055854.1-202ENST00000519624 SLC4A8Q2Y0W8 1093 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms