RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 ZNF280CQ8ND82 737 aa7□□□□□ -1.29
CSMD3-209ENST00000519485 SLC6A14Q9UN76 642 aa7□□□□□ -1.29
CSMD3-209ENST00000519485 KIAA1024Q9UPX6 916 aa7□□□□□ -1.29
CSMD3-209ENST00000519485 CLDN10P78369 228 aa6.99□□□□□ -1.29
CSMD3-209ENST00000519485 IER5Q5VY09 327 aa6.99□□□□□ -1.29
CSMD3-209ENST00000519485 SIX5Q8N196 739 aa6.99□□□□□ -1.29
CSMD3-209ENST00000519485 BHMTQ93088 406 aa6.99□□□□□ -1.29
CSMD3-209ENST00000519485 HCN4Q9Y3Q4 1203 aa6.99□□□□□ -1.29
CSMD3-209ENST00000519485 PALM3A6NDB9 673 aaPredicted RBP6.98□□□□□ -1.29
CSMD3-209ENST00000519485 AFF1P51825 1210 aaKnown RBP6.98□□□□□ -1.29
CSMD3-209ENST00000519485 BTLAQ7Z6A9 289 aa6.98□□□□□ -1.29
CSMD3-209ENST00000519485 FMR1NBQ8N0W7 255 aaPredicted RBP6.98□□□□□ -1.29
CSMD3-209ENST00000519485 DEPDC4Q8N2C3 294 aa6.98□□□□□ -1.29
CSMD3-209ENST00000519485 DTWD1Q8N5C7 304 aa6.98□□□□□ -1.29
CSMD3-209ENST00000519485 GAS2L2Q8NHY3 880 aa6.98□□□□□ -1.29
CSMD3-209ENST00000519485 JPH1Q9HDC5 661 aaPredicted RBP6.98□□□□□ -1.29
CSMD3-209ENST00000519485 USP17L3A6NCW0 530 aa6.97□□□□□ -1.29
CSMD3-209ENST00000519485 USP17L4A6NCW7 530 aa6.97□□□□□ -1.29
CSMD3-209ENST00000519485 C21orf2O43822 256 aa6.97□□□□□ -1.29
CSMD3-209ENST00000519485 DKK1O94907 266 aa6.97□□□□□ -1.29
CSMD3-209ENST00000519485 LCE3BQ5TA77 95 aa6.97□□□□□ -1.29
CSMD3-209ENST00000519485 USP17L2Q6R6M4 530 aa6.97□□□□□ -1.29
CSMD3-209ENST00000519485 USP17L1Q7RTZ2 530 aa6.97□□□□□ -1.29
CSMD3-209ENST00000519485 UBE2OQ9C0C9 1292 aaKnown RBP6.97□□□□□ -1.29
CSMD3-209ENST00000519485 HYAL3O43820 417 aaPredicted RBP6.96□□□□□ -1.3
CSMD3-209ENST00000519485 PCSK7Q16549 785 aa6.96□□□□□ -1.3
CSMD3-209ENST00000519485 ALDH16A1Q8IZ83 802 aa6.96□□□□□ -1.3
CSMD3-209ENST00000519485 C2orf49Q9BVC5 232 aaPredicted RBP6.96□□□□□ -1.3
CSMD3-209ENST00000519485 GSX2Q9BZM3 304 aa6.96□□□□□ -1.3
CSMD3-209ENST00000519485 ATP9BO43861 1147 aa6.95□□□□□ -1.3
CSMD3-209ENST00000519485 PSAPL1Q6NUJ1 521 aa6.95□□□□□ -1.3
CSMD3-209ENST00000519485 SHISA2Q6UWI4 295 aa6.95□□□□□ -1.3
CSMD3-209ENST00000519485 OGFOD1Q8N543 542 aa6.95□□□□□ -1.3
CSMD3-209ENST00000519485 TP53INP1Q96A56 240 aa6.95□□□□□ -1.3
CSMD3-209ENST00000519485 C11orf16Q9NQ32 467 aa6.95□□□□□ -1.3
CSMD3-209ENST00000519485 DNAJB12Q9NXW2 375 aaKnown RBP6.95□□□□□ -1.3
CSMD3-209ENST00000519485 FRRS1LQ9P0K9 344 aa6.95□□□□□ -1.3
CSMD3-209ENST00000519485 NAGPAQ9UK23 515 aa6.95□□□□□ -1.3
CSMD3-209ENST00000519485 PPP1R12BO60237 982 aaPredicted RBP6.94□□□□□ -1.3
CSMD3-209ENST00000519485 ADAMTS19Q8TE59 1207 aa6.94□□□□□ -1.3
CSMD3-209ENST00000519485 TTC9Q92623 222 aa6.94□□□□□ -1.3
CSMD3-209ENST00000519485 UCN2Q96RP3 112 aa6.94□□□□□ -1.3
CSMD3-209ENST00000519485 RNF112Q9ULX5 631 aa6.94□□□□□ -1.3
CSMD3-209ENST00000519485 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.94□□□□□ -1.3
CSMD3-209ENST00000519485 MAP3K6O95382 1288 aa6.93□□□□□ -1.3
CSMD3-209ENST00000519485 CCINQ13939 588 aa6.93□□□□□ -1.3
CSMD3-209ENST00000519485 GRIK5Q16478 980 aa6.93□□□□□ -1.3
CSMD3-209ENST00000519485 MSL1Q68DK7 614 aa6.93□□□□□ -1.3
CSMD3-209ENST00000519485 TSEN2Q8NCE0 465 aaKnown RBP6.93□□□□□ -1.3
CSMD3-209ENST00000519485 NUDT8Q8WV74 236 aa6.93□□□□□ -1.3
CSMD3-209ENST00000519485 MKRN1Q9UHC7 482 aaKnown RBP6.93□□□□□ -1.3
CSMD3-209ENST00000519485 DMGDHQ9UI17 866 aaKnown RBP6.93□□□□□ -1.3
CSMD3-209ENST00000519485 ATAD2Q6PL18 1390 aa6.93□□□□□ -1.3
CSMD3-209ENST00000519485 TGFBR3LH3BV60 316 aa6.92□□□□□ -1.3
CSMD3-209ENST00000519485 RGS9O75916 674 aaPredicted RBP6.92□□□□□ -1.3
CSMD3-209ENST00000519485 PRKCSHP14314 528 aaPredicted RBP6.92□□□□□ -1.3
CSMD3-209ENST00000519485 RTN1Q16799 776 aa6.92□□□□□ -1.3
CSMD3-209ENST00000519485 SLC51AQ86UW1 340 aa6.92□□□□□ -1.3
CSMD3-209ENST00000519485 FBXO11Q86XK2 927 aa6.92□□□□□ -1.3
CSMD3-209ENST00000519485 DMRTC2Q8IXT2 367 aaPredicted RBP6.92□□□□□ -1.3
CSMD3-209ENST00000519485 USP21Q9UK80 565 aa6.92□□□□□ -1.3
CSMD3-209ENST00000519485 TBC1D8BQ0IIM8 1120 aa6.91□□□□□ -1.3
CSMD3-209ENST00000519485 POM121Q96HA1 1249 aa6.91□□□□□ -1.3
CSMD3-209ENST00000519485 PNMA5Q96PV4 448 aa6.91□□□□□ -1.3
CSMD3-209ENST00000519485 NFKB1P19838 968 aa6.9□□□□□ -1.3
CSMD3-209ENST00000519485 IGF2-ASQ6U949 168 aa6.9□□□□□ -1.3
CSMD3-209ENST00000519485 KRTAP19-1Q8IUB9 90 aa6.9□□□□□ -1.3
CSMD3-209ENST00000519485 TRPM4Q8TD43 1214 aa6.9□□□□□ -1.3
CSMD3-209ENST00000519485 WFDC12Q8WWY7 111 aa6.9□□□□□ -1.3
CSMD3-209ENST00000519485 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
CSMD3-209ENST00000519485 IGFLR1Q9H665 355 aa6.9□□□□□ -1.3
CSMD3-209ENST00000519485 BCS1LQ9Y276 419 aa6.9□□□□□ -1.3
CSMD3-209ENST00000519485 RBM19Q9Y4C8 960 aaKnown RBP6.9□□□□□ -1.3
CSMD3-209ENST00000519485 POM121CA8CG34 1229 aa6.89□□□□□ -1.31
CSMD3-209ENST00000519485 EPB42P16452 691 aa6.89□□□□□ -1.31
CSMD3-209ENST00000519485 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
CSMD3-209ENST00000519485 FAM35AQ86V20 835 aa6.89□□□□□ -1.31
CSMD3-209ENST00000519485 RAD21O60216 631 aa6.88□□□□□ -1.31
CSMD3-209ENST00000519485 NOS3P29474 1203 aa6.88□□□□□ -1.31
CSMD3-209ENST00000519485 INPP5BP32019 993 aa6.88□□□□□ -1.31
CSMD3-209ENST00000519485 SEC13P55735 322 aa6.88□□□□□ -1.31
CSMD3-209ENST00000519485 SCG3Q8WXD2 468 aaKnown RBP6.88□□□□□ -1.31
CSMD3-209ENST00000519485 GPLD1P80108 840 aa6.87□□□□□ -1.31
CSMD3-209ENST00000519485 HDGFL1Q5TGJ6 251 aa6.87□□□□□ -1.31
CSMD3-209ENST00000519485 ZNF594Q96JF6 807 aaPredicted RBP6.87□□□□□ -1.31
CSMD3-209ENST00000519485 ZBTB42B2RXF5 422 aa6.86□□□□□ -1.31
CSMD3-209ENST00000519485 IGFBP4P22692 258 aa6.86□□□□□ -1.31
CSMD3-209ENST00000519485 IREB2P48200 963 aaKnown RBP6.86□□□□□ -1.31
CSMD3-209ENST00000519485 PERM1Q5SV97 790 aa6.86□□□□□ -1.31
CSMD3-209ENST00000519485 PRR23CQ6ZRP0 262 aa6.86□□□□□ -1.31
CSMD3-209ENST00000519485 DHX32Q7L7V1 743 aaKnown RBP6.86□□□□□ -1.31
CSMD3-209ENST00000519485 WFDC8Q8IUA0 241 aa6.86□□□□□ -1.31
CSMD3-209ENST00000519485 DZIP1LQ8IYY4 767 aaKnown RBP6.86□□□□□ -1.31
CSMD3-209ENST00000519485 GOLGA2P5Q9HBQ8 144 aa6.86□□□□□ -1.31
CSMD3-209ENST00000519485 DLL1O00548 723 aa6.85□□□□□ -1.31
CSMD3-209ENST00000519485 CPB1P15086 417 aa6.85□□□□□ -1.31
CSMD3-209ENST00000519485 FLIIQ13045 1269 aa6.85□□□□□ -1.31
CSMD3-209ENST00000519485 TMEM130Q8N3G9 435 aa6.85□□□□□ -1.31
CSMD3-209ENST00000519485 NGLY1Q96IV0 654 aa6.85□□□□□ -1.31
CSMD3-209ENST00000519485 MEGF10Q96KG7 1140 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms