RNA–Protein interactions for RNA: ENST00000519442.1

SOX30-203, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX30, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-203ENST00000519442 LINC00116Q8NCU8 138 aa16.46■□□□□ 0.23
SOX30-203ENST00000519442 RREB1Q92766 1687 aa16.46■□□□□ 0.22
SOX30-203ENST00000519442 GSPT1P15170 499 aaKnown RBP16.45■□□□□ 0.22
SOX30-203ENST00000519442 PDE1AP54750 535 aa16.45■□□□□ 0.22
SOX30-203ENST00000519442 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.22
SOX30-203ENST00000519442 KRT27Q7Z3Y8 459 aa16.45■□□□□ 0.22
SOX30-203ENST00000519442 OSBPL3Q9H4L5 887 aa16.45■□□□□ 0.22
SOX30-203ENST00000519442 BTAF1O14981 1849 aa16.45■□□□□ 0.22
SOX30-203ENST00000519442 SALL3Q9BXA9 1300 aa16.44■□□□□ 0.22
SOX30-203ENST00000519442 PCCAP05165 728 aaPredicted RBP16.44■□□□□ 0.22
SOX30-203ENST00000519442 MX1P20591 662 aa16.44■□□□□ 0.22
SOX30-203ENST00000519442 GPTP24298 496 aa16.44■□□□□ 0.22
SOX30-203ENST00000519442 RXRBP28702 533 aa16.44■□□□□ 0.22
SOX30-203ENST00000519442 LMBR1LQ6UX01 489 aa16.44■□□□□ 0.22
SOX30-203ENST00000519442 ZBTB38Q8NAP3 1195 aaPredicted RBP16.44■□□□□ 0.22
SOX30-203ENST00000519442 UPF2Q9HAU5 1272 aaKnown RBP16.44■□□□□ 0.22
SOX30-203ENST00000519442 CHMP3Q9Y3E7 222 aa16.44■□□□□ 0.22
SOX30-203ENST00000519442 CNTNAP4Q9C0A0 1308 aa16.44■□□□□ 0.22
SOX30-203ENST00000519442 COL5A3P25940 1745 aaPredicted RBP16.43■□□□□ 0.22
SOX30-203ENST00000519442 KCNQ4P56696 695 aa16.43■□□□□ 0.22
SOX30-203ENST00000519442 FOXO4P98177 505 aa16.43■□□□□ 0.22
SOX30-203ENST00000519442 FAM196AQ6ZSG2 479 aa16.43■□□□□ 0.22
SOX30-203ENST00000519442 NLRP10Q86W26 655 aa16.43■□□□□ 0.22
SOX30-203ENST00000519442 BCL11BQ9C0K0 894 aaPredicted RBP16.43■□□□□ 0.22
SOX30-203ENST00000519442 CCNL1Q9UK58 526 aaPredicted RBP16.43■□□□□ 0.22
SOX30-203ENST00000519442 SEC24BO95487 1268 aa16.43■□□□□ 0.22
SOX30-203ENST00000519442 CLASRPQ8N2M8 674 aaKnown RBP16.43■□□□□ 0.22
SOX30-203ENST00000519442 SIL1Q9H173 461 aa16.43■□□□□ 0.22
SOX30-203ENST00000519442 RFX5P48382 616 aaPredicted RBP16.42■□□□□ 0.22
SOX30-203ENST00000519442 POTEAQ6S8J7 498 aa16.42■□□□□ 0.22
SOX30-203ENST00000519442 KLHDC4Q8TBB5 520 aa16.42■□□□□ 0.22
SOX30-203ENST00000519442 FAM89AQ96GI7 184 aa16.42■□□□□ 0.22
SOX30-203ENST00000519442 COPRSQ9NQ92 184 aa16.42■□□□□ 0.22
SOX30-203ENST00000519442 CAMTA2O94983 1202 aa16.41■□□□□ 0.22
SOX30-203ENST00000519442 PTPN12Q05209 780 aaKnown RBP16.41■□□□□ 0.22
SOX30-203ENST00000519442 RC3H1Q5TC82 1133 aaKnown RBP16.41■□□□□ 0.22
SOX30-203ENST00000519442 NUTM1Q86Y26 1132 aa16.41■□□□□ 0.22
SOX30-203ENST00000519442 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
SOX30-203ENST00000519442 STAP2Q9UGK3 403 aa16.41■□□□□ 0.22
SOX30-203ENST00000519442 AOX1Q06278 1338 aa16.41■□□□□ 0.22
SOX30-203ENST00000519442 CDHR2Q9BYE9 1310 aa16.41■□□□□ 0.22
SOX30-203ENST00000519442 CDC45O75419 566 aa16.4■□□□□ 0.22
SOX30-203ENST00000519442 PLA2G12BQ9BX93 195 aa16.4■□□□□ 0.22
SOX30-203ENST00000519442 TRMT112Q9UI30 125 aaKnown RBP16.4■□□□□ 0.22
SOX30-203ENST00000519442 ZNF652Q9Y2D9 606 aa16.4■□□□□ 0.22
SOX30-203ENST00000519442 SASH1O94885 1247 aa16.4■□□□□ 0.22
SOX30-203ENST00000519442 TSHZ3Q63HK5 1081 aa16.4■□□□□ 0.22
SOX30-203ENST00000519442 SBF2Q86WG5 1849 aa16.4■□□□□ 0.22
SOX30-203ENST00000519442 MYH14Q7Z406 1995 aaKnown RBP16.39■□□□□ 0.21
SOX30-203ENST00000519442 UBN2Q6ZU65 1347 aa16.39■□□□□ 0.21
SOX30-203ENST00000519442 ANKRD36CQ5JPF3 1778 aa16.39■□□□□ 0.21
SOX30-203ENST00000519442 SDSP20132 328 aa16.39■□□□□ 0.21
SOX30-203ENST00000519442 MFAP1P55081 439 aaKnown RBP16.39■□□□□ 0.21
SOX30-203ENST00000519442 RPS6KA4O75676 772 aa16.38■□□□□ 0.21
SOX30-203ENST00000519442 IFIT2P09913 472 aaKnown RBP16.38■□□□□ 0.21
SOX30-203ENST00000519442 PARP10Q53GL7 1025 aa16.38■□□□□ 0.21
SOX30-203ENST00000519442 TBC1D9Q6ZT07 1266 aa16.38■□□□□ 0.21
SOX30-203ENST00000519442 NUP98P52948 1817 aa16.37■□□□□ 0.21
SOX30-203ENST00000519442 GNPATO15228 680 aa16.37■□□□□ 0.21
SOX30-203ENST00000519442 GPATCH3Q96I76 525 aa16.37■□□□□ 0.21
SOX30-203ENST00000519442 LY75O60449 1722 aa16.37■□□□□ 0.21
SOX30-203ENST00000519442 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
SOX30-203ENST00000519442 CCDC57Q2TAC2 916 aa16.37■□□□□ 0.21
SOX30-203ENST00000519442 CASC1Q6TDU7 716 aa16.37■□□□□ 0.21
SOX30-203ENST00000519442 CLEC4GQ6UXB4 293 aa16.37■□□□□ 0.21
SOX30-203ENST00000519442 AACSQ86V21 672 aa16.37■□□□□ 0.21
SOX30-203ENST00000519442 NIP7Q9Y221 180 aaKnown RBP eCLIP16.37■□□□□ 0.21
SOX30-203ENST00000519442 RTCBQ9Y3I0 505 aaKnown RBP16.37■□□□□ 0.21
SOX30-203ENST00000519442 TTC41PQ6P2S7 1318 aa16.36■□□□□ 0.21
SOX30-203ENST00000519442 EIF5BO60841 1220 aaKnown RBP16.36■□□□□ 0.21
SOX30-203ENST00000519442 TRIM37O94972 964 aa16.36■□□□□ 0.21
SOX30-203ENST00000519442 SYNE4Q8N205 404 aa16.36■□□□□ 0.21
SOX30-203ENST00000519442 UTP14AQ9BVJ6 771 aaKnown RBP16.36■□□□□ 0.21
SOX30-203ENST00000519442 USP42Q9H9J4 1324 aaKnown RBP16.36■□□□□ 0.21
SOX30-203ENST00000519442 BRWD3Q6RI45 1802 aa16.35■□□□□ 0.21
SOX30-203ENST00000519442 TRIM6-TRIM34B2RNG4 842 aa16.35■□□□□ 0.21
SOX30-203ENST00000519442 PDE8AO60658 829 aa16.35■□□□□ 0.21
SOX30-203ENST00000519442 CSF1RP07333 972 aa16.35■□□□□ 0.21
SOX30-203ENST00000519442 SUSD4Q5VX71 490 aa16.35■□□□□ 0.21
SOX30-203ENST00000519442 SH3TC1Q8TE82 1336 aa16.35■□□□□ 0.21
SOX30-203ENST00000519442 ERC2O15083 957 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 RGL2O15211 777 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 CTSWP56202 376 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 TFCP2Q12800 502 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 IFIT5Q13325 482 aaKnown RBP16.34■□□□□ 0.21
SOX30-203ENST00000519442 PI4K2BQ8TCG2 481 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 RILPL2Q969X0 211 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 EAF2Q96CJ1 260 aaPredicted RBP16.34■□□□□ 0.21
SOX30-203ENST00000519442 IPO9Q96P70 1041 aaKnown RBP16.34■□□□□ 0.21
SOX30-203ENST00000519442 BCORQ6W2J9 1755 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 FAM177BA6PVY3 158 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 GLRX3O76003 335 aaKnown RBP16.34■□□□□ 0.21
SOX30-203ENST00000519442 IL15P40933 162 aaPredicted RBP16.34■□□□□ 0.21
SOX30-203ENST00000519442 TAF7LQ5H9L4 462 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 DDRGK1Q96HY6 314 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 AK7Q96M32 723 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 TBC1D32Q96NH3 1257 aa16.34■□□□□ 0.21
SOX30-203ENST00000519442 CCDC85AQ96PX6 553 aaPredicted RBP16.34■□□□□ 0.21
SOX30-203ENST00000519442 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
SOX30-203ENST00000519442 ECHDC1Q9NTX5 307 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms