RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 LINC00116Q8NCU8 138 aa15.35■□□□□ 0.05
SPIDR-209ENST00000519141 BACH2Q9BYV9 841 aa15.35■□□□□ 0.05
SPIDR-209ENST00000519141 CNTNAP4Q9C0A0 1308 aa15.35■□□□□ 0.05
SPIDR-209ENST00000519141 BCORQ6W2J9 1755 aa15.34■□□□□ 0.05
SPIDR-209ENST00000519141 H7C1W4 665 aa15.34■□□□□ 0.05
SPIDR-209ENST00000519141 SURF6O75683 361 aaKnown RBP15.34■□□□□ 0.05
SPIDR-209ENST00000519141 CASP7P55210 303 aa15.34■□□□□ 0.05
SPIDR-209ENST00000519141 LRRCC1Q9C099 1032 aa15.34■□□□□ 0.05
SPIDR-209ENST00000519141 CCNL1Q9UK58 526 aaPredicted RBP15.34■□□□□ 0.05
SPIDR-209ENST00000519141 TBC1D2BQ9UPU7 963 aa15.34■□□□□ 0.05
SPIDR-209ENST00000519141 SMARCA5O60264 1052 aaPredicted RBP15.33■□□□□ 0.04
SPIDR-209ENST00000519141 RAB11FIP3O75154 756 aa15.33■□□□□ 0.04
SPIDR-209ENST00000519141 HLFQ16534 295 aa15.33■□□□□ 0.04
SPIDR-209ENST00000519141 HSP90AB4PQ58FF6 505 aa15.33■□□□□ 0.04
SPIDR-209ENST00000519141 JARID2Q92833 1246 aaPredicted RBP15.33■□□□□ 0.04
SPIDR-209ENST00000519141 RBM19Q9Y4C8 960 aaKnown RBP15.33■□□□□ 0.04
SPIDR-209ENST00000519141 KCNQ4P56696 695 aa15.32■□□□□ 0.04
SPIDR-209ENST00000519141 C8orf34Q49A92 452 aa15.32■□□□□ 0.04
SPIDR-209ENST00000519141 EPHA10Q5JZY3 1008 aa15.32■□□□□ 0.04
SPIDR-209ENST00000519141 BCL11AQ9H165 835 aa15.32■□□□□ 0.04
SPIDR-209ENST00000519141 SCN7AQ01118 1682 aa15.31■□□□□ 0.04
SPIDR-209ENST00000519141 GPTP24298 496 aa15.31■□□□□ 0.04
SPIDR-209ENST00000519141 OS9Q13438 667 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-209ENST00000519141 TXNRD1Q16881 649 aa15.31■□□□□ 0.04
SPIDR-209ENST00000519141 RABL6Q3YEC7 729 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-209ENST00000519141 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
SPIDR-209ENST00000519141 NOP58Q9Y2X3 529 aaKnown RBP15.31■□□□□ 0.04
SPIDR-209ENST00000519141 C4BP0C0L5 1744 aa15.3■□□□□ 0.04
SPIDR-209ENST00000519141 PCCAP05165 728 aaPredicted RBP15.3■□□□□ 0.04
SPIDR-209ENST00000519141 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
SPIDR-209ENST00000519141 NLRP10Q86W26 655 aa15.3■□□□□ 0.04
SPIDR-209ENST00000519141 KIF1BPQ96EK5 621 aa15.3■□□□□ 0.04
SPIDR-209ENST00000519141 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
SPIDR-209ENST00000519141 ERC1Q8IUD2 1116 aa15.29■□□□□ 0.04
SPIDR-209ENST00000519141 PLEKHM2Q8IWE5 1019 aa15.29■□□□□ 0.04
SPIDR-209ENST00000519141 ANO8Q9HCE9 1232 aaPredicted RBP15.29■□□□□ 0.04
SPIDR-209ENST00000519141 LRP5O75197 1615 aa15.29■□□□□ 0.04
SPIDR-209ENST00000519141 MYH3P11055 1940 aa15.29■□□□□ 0.04
SPIDR-209ENST00000519141 BMP2KLQ5H9B9 411 aa15.28■□□□□ 0.04
SPIDR-209ENST00000519141 C16orf71Q8IYS4 520 aaPredicted RBP15.28■□□□□ 0.04
SPIDR-209ENST00000519141 ZBTB38Q8NAP3 1195 aaPredicted RBP15.28■□□□□ 0.04
SPIDR-209ENST00000519141 RHPN1Q8TCX5 695 aa15.28■□□□□ 0.04
SPIDR-209ENST00000519141 ZNF652Q9Y2D9 606 aa15.28■□□□□ 0.04
SPIDR-209ENST00000519141 FOXO4P98177 505 aa15.28■□□□□ 0.04
SPIDR-209ENST00000519141 LMBR1LQ6UX01 489 aa15.28■□□□□ 0.04
SPIDR-209ENST00000519141 ZNF34Q8IZ26 560 aa15.28■□□□□ 0.04
SPIDR-209ENST00000519141 OTUD7AQ8TE49 926 aaPredicted RBP15.28■□□□□ 0.04
SPIDR-209ENST00000519141 PA2G4Q9UQ80 394 aaKnown RBP15.28■□□□□ 0.04
SPIDR-209ENST00000519141 UTRNP46939 3433 aa15.28■□□□□ 0.04
SPIDR-209ENST00000519141 CDHR2Q9BYE9 1310 aa15.27■□□□□ 0.04
SPIDR-209ENST00000519141 GNPATO15228 680 aa15.27■□□□□ 0.03
SPIDR-209ENST00000519141 RPS6KA4O75676 772 aa15.27■□□□□ 0.03
SPIDR-209ENST00000519141 G3BP1Q13283 466 aaKnown RBP eCLIP15.27■□□□□ 0.03
SPIDR-209ENST00000519141 CHMP3Q9Y3E7 222 aa15.27■□□□□ 0.03
SPIDR-209ENST00000519141 UBN2Q6ZU65 1347 aa15.26■□□□□ 0.03
SPIDR-209ENST00000519141 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
SPIDR-209ENST00000519141 IL1RAPL2Q9NP60 686 aa15.26■□□□□ 0.03
SPIDR-209ENST00000519141 COPRSQ9NQ92 184 aa15.26■□□□□ 0.03
SPIDR-209ENST00000519141 TRMT112Q9UI30 125 aaKnown RBP15.26■□□□□ 0.03
SPIDR-209ENST00000519141 C4AP0C0L4 1744 aa15.26■□□□□ 0.03
SPIDR-209ENST00000519141 RGL2O15211 777 aa15.25■□□□□ 0.03
SPIDR-209ENST00000519141 PARP10Q53GL7 1025 aa15.25■□□□□ 0.03
SPIDR-209ENST00000519141 TTC22Q5TAA0 569 aa15.25■□□□□ 0.03
SPIDR-209ENST00000519141 PLA2G12BQ9BX93 195 aa15.25■□□□□ 0.03
SPIDR-209ENST00000519141 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
SPIDR-209ENST00000519141 LAMB2P55268 1798 aa15.25■□□□□ 0.03
SPIDR-209ENST00000519141 MX1P20591 662 aa15.25■□□□□ 0.03
SPIDR-209ENST00000519141 RFX5P48382 616 aaPredicted RBP15.25■□□□□ 0.03
SPIDR-209ENST00000519141 SLC27A3Q5K4L6 730 aa15.25■□□□□ 0.03
SPIDR-209ENST00000519141 CLEC4GQ6UXB4 293 aa15.25■□□□□ 0.03
SPIDR-209ENST00000519141 AK7Q96M32 723 aa15.25■□□□□ 0.03
SPIDR-209ENST00000519141 SIL1Q9H173 461 aa15.25■□□□□ 0.03
SPIDR-209ENST00000519141 OSBPL3Q9H4L5 887 aa15.25■□□□□ 0.03
SPIDR-209ENST00000519141 SALL3Q9BXA9 1300 aa15.24■□□□□ 0.03
SPIDR-209ENST00000519141 PDE1AP54750 535 aa15.24■□□□□ 0.03
SPIDR-209ENST00000519141 KLHDC4Q8TBB5 520 aa15.24■□□□□ 0.03
SPIDR-209ENST00000519141 NIP7Q9Y221 180 aaKnown RBP eCLIP15.24■□□□□ 0.03
SPIDR-209ENST00000519141 UBR3Q6ZT12 1888 aa15.24■□□□□ 0.03
SPIDR-209ENST00000519141 PTPN12Q05209 780 aaKnown RBP15.23■□□□□ 0.03
SPIDR-209ENST00000519141 SLC15A2Q16348 729 aa15.23■□□□□ 0.03
SPIDR-209ENST00000519141 CLASRPQ8N2M8 674 aaKnown RBP15.23■□□□□ 0.03
SPIDR-209ENST00000519141 LRRC4BQ9NT99 713 aa15.23■□□□□ 0.03
SPIDR-209ENST00000519141 NARFQ9UHQ1 456 aa15.23■□□□□ 0.03
SPIDR-209ENST00000519141 TUBGCP6Q96RT7 1819 aa15.23■□□□□ 0.03
SPIDR-209ENST00000519141 AOX1Q06278 1338 aa15.23■□□□□ 0.03
SPIDR-209ENST00000519141 SH3TC1Q8TE82 1336 aa15.23■□□□□ 0.03
SPIDR-209ENST00000519141 IRS4O14654 1257 aaPredicted RBP15.22■□□□□ 0.03
SPIDR-209ENST00000519141 GSPT1P15170 499 aaKnown RBP15.22■□□□□ 0.03
SPIDR-209ENST00000519141 HMGB2P26583 209 aaKnown RBP15.22■□□□□ 0.03
SPIDR-209ENST00000519141 UTP14AQ9BVJ6 771 aaKnown RBP15.22■□□□□ 0.03
SPIDR-209ENST00000519141 PDGFDQ9GZP0 370 aaPredicted RBP15.22■□□□□ 0.03
SPIDR-209ENST00000519141 DDX60Q8IY21 1712 aaKnown RBP15.22■□□□□ 0.03
SPIDR-209ENST00000519141 ZPR1O75312 459 aa15.22■□□□□ 0.03
SPIDR-209ENST00000519141 SUSD4Q5VX71 490 aa15.22■□□□□ 0.03
SPIDR-209ENST00000519141 NUTM1Q86Y26 1132 aa15.22■□□□□ 0.03
SPIDR-209ENST00000519141 STK32BQ9NY57 414 aa15.22■□□□□ 0.03
SPIDR-209ENST00000519141 STAP2Q9UGK3 403 aa15.22■□□□□ 0.03
SPIDR-209ENST00000519141 GOLGB1Q14789 3259 aaKnown RBP15.21■□□□□ 0.03
SPIDR-209ENST00000519141 COL24A1Q17RW2 1714 aa15.21■□□□□ 0.03
SPIDR-209ENST00000519141 PDE8AO60658 829 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms