RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 SMARCA5O60264 1052 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC9-205ENST00000518839 OS9Q13438 667 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC9-205ENST00000518839 HLFQ16534 295 aa18.59■□□□□ 0.57
TRAPPC9-205ENST00000518839 ZBTB38Q8NAP3 1195 aaPredicted RBP18.59■□□□□ 0.57
TRAPPC9-205ENST00000518839 RHPN1Q8TCX5 695 aa18.59■□□□□ 0.57
TRAPPC9-205ENST00000518839 OSBPL3Q9H4L5 887 aa18.59■□□□□ 0.57
TRAPPC9-205ENST00000518839 SCN7AQ01118 1682 aa18.58■□□□□ 0.57
TRAPPC9-205ENST00000518839 EIF5BO60841 1220 aaKnown RBP18.58■□□□□ 0.56
TRAPPC9-205ENST00000518839 RXRBP28702 533 aa18.58■□□□□ 0.56
TRAPPC9-205ENST00000518839 G3BP1Q13283 466 aaKnown RBP eCLIP18.58■□□□□ 0.56
TRAPPC9-205ENST00000518839 PTF1AQ7RTS3 328 aa18.58■□□□□ 0.56
TRAPPC9-205ENST00000518839 NLRP10Q86W26 655 aa18.58■□□□□ 0.56
TRAPPC9-205ENST00000518839 PLA2G12BQ9BX93 195 aa18.58■□□□□ 0.56
TRAPPC9-205ENST00000518839 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.56
TRAPPC9-205ENST00000518839 AOX1Q06278 1338 aa18.57■□□□□ 0.56
TRAPPC9-205ENST00000518839 CAMTA2O94983 1202 aa18.57■□□□□ 0.56
TRAPPC9-205ENST00000518839 PARP10Q53GL7 1025 aa18.57■□□□□ 0.56
TRAPPC9-205ENST00000518839 EPHA10Q5JZY3 1008 aa18.57■□□□□ 0.56
TRAPPC9-205ENST00000518839 ZNF34Q8IZ26 560 aa18.57■□□□□ 0.56
TRAPPC9-205ENST00000518839 COPRSQ9NQ92 184 aa18.57■□□□□ 0.56
TRAPPC9-205ENST00000518839 C4BP0C0L5 1744 aa18.57■□□□□ 0.56
TRAPPC9-205ENST00000518839 RPS6KA4O75676 772 aa18.56■□□□□ 0.56
TRAPPC9-205ENST00000518839 FOXO4P98177 505 aa18.56■□□□□ 0.56
TRAPPC9-205ENST00000518839 TTC22Q5TAA0 569 aa18.56■□□□□ 0.56
TRAPPC9-205ENST00000518839 CLEC4GQ6UXB4 293 aa18.56■□□□□ 0.56
TRAPPC9-205ENST00000518839 HSP90B1P14625 803 aaKnown RBP18.55■□□□□ 0.56
TRAPPC9-205ENST00000518839 SLC27A3Q5K4L6 730 aa18.55■□□□□ 0.56
TRAPPC9-205ENST00000518839 LMBR1LQ6UX01 489 aa18.55■□□□□ 0.56
TRAPPC9-205ENST00000518839 CLASRPQ8N2M8 674 aaKnown RBP18.55■□□□□ 0.56
TRAPPC9-205ENST00000518839 SALL3Q9BXA9 1300 aa18.54■□□□□ 0.56
TRAPPC9-205ENST00000518839 MX1P20591 662 aa18.54■□□□□ 0.56
TRAPPC9-205ENST00000518839 GPTP24298 496 aa18.54■□□□□ 0.56
TRAPPC9-205ENST00000518839 PDE1AP54750 535 aa18.54■□□□□ 0.56
TRAPPC9-205ENST00000518839 C16orf71Q8IYS4 520 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC9-205ENST00000518839 JARID2Q92833 1246 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC9-205ENST00000518839 AK7Q96M32 723 aa18.54■□□□□ 0.56
TRAPPC9-205ENST00000518839 STAP2Q9UGK3 403 aa18.54■□□□□ 0.56
TRAPPC9-205ENST00000518839 LAMB2P55268 1798 aa18.54■□□□□ 0.56
TRAPPC9-205ENST00000518839 TUBGCP6Q96RT7 1819 aa18.53■□□□□ 0.56
TRAPPC9-205ENST00000518839 RFX5P48382 616 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC9-205ENST00000518839 UPF2Q9HAU5 1272 aaKnown RBP18.53■□□□□ 0.56
TRAPPC9-205ENST00000518839 TRMT112Q9UI30 125 aaKnown RBP18.53■□□□□ 0.56
TRAPPC9-205ENST00000518839 PA2G4Q9UQ80 394 aaKnown RBP18.53■□□□□ 0.56
TRAPPC9-205ENST00000518839 RTCBQ9Y3I0 505 aaKnown RBP18.53■□□□□ 0.56
TRAPPC9-205ENST00000518839 FBXO3Q9UK99 471 aa18.52■□□□□ 0.56
TRAPPC9-205ENST00000518839 CHMP3Q9Y3E7 222 aa18.52■□□□□ 0.56
TRAPPC9-205ENST00000518839 GNPATO15228 680 aa18.51■□□□□ 0.55
TRAPPC9-205ENST00000518839 ANP32AP39687 249 aaKnown RBP18.51■□□□□ 0.55
TRAPPC9-205ENST00000518839 PTPN12Q05209 780 aaKnown RBP18.51■□□□□ 0.55
TRAPPC9-205ENST00000518839 OTUD7AQ8TE49 926 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC9-205ENST00000518839 FAM89AQ96GI7 184 aa18.51■□□□□ 0.55
TRAPPC9-205ENST00000518839 GPATCH3Q96I76 525 aa18.51■□□□□ 0.55
TRAPPC9-205ENST00000518839 IL1RAPL2Q9NP60 686 aa18.51■□□□□ 0.55
TRAPPC9-205ENST00000518839 TTC41PQ6P2S7 1318 aa18.5■□□□□ 0.55
TRAPPC9-205ENST00000518839 UBN2Q6ZU65 1347 aa18.5■□□□□ 0.55
TRAPPC9-205ENST00000518839 TRIM37O94972 964 aa18.5■□□□□ 0.55
TRAPPC9-205ENST00000518839 CSF1RP07333 972 aa18.5■□□□□ 0.55
TRAPPC9-205ENST00000518839 ADRA2BP18089 450 aa18.5■□□□□ 0.55
TRAPPC9-205ENST00000518839 RTL5Q5HYW3 569 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC9-205ENST00000518839 UTP14AQ9BVJ6 771 aaKnown RBP18.5■□□□□ 0.55
TRAPPC9-205ENST00000518839 BCL11AQ9H165 835 aa18.5■□□□□ 0.55
TRAPPC9-205ENST00000518839 NARFQ9UHQ1 456 aa18.5■□□□□ 0.55
TRAPPC9-205ENST00000518839 AK9Q5TCS8 1911 aa18.5■□□□□ 0.55
TRAPPC9-205ENST00000518839 SH3TC1Q8TE82 1336 aa18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 C4AP0C0L4 1744 aa18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 IRS4O14654 1257 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 PDE8AO60658 829 aa18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 CDC45O75419 566 aa18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 GSPT1P15170 499 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 CCDC57Q2TAC2 916 aa18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 NIP7Q9Y221 180 aaKnown RBP eCLIP18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 RGPD3A6NKT7 1758 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 RGPD4Q7Z3J3 1758 aa18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 UBR3Q6ZT12 1888 aa18.49■□□□□ 0.55
TRAPPC9-205ENST00000518839 ZPR1O75312 459 aa18.48■□□□□ 0.55
TRAPPC9-205ENST00000518839 CIAO1O76071 339 aa18.48■□□□□ 0.55
TRAPPC9-205ENST00000518839 SASH1O94885 1247 aa18.48■□□□□ 0.55
TRAPPC9-205ENST00000518839 IFIT2P09913 472 aaKnown RBP18.48■□□□□ 0.55
TRAPPC9-205ENST00000518839 KCNQ4P56696 695 aa18.48■□□□□ 0.55
TRAPPC9-205ENST00000518839 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
TRAPPC9-205ENST00000518839 SIL1Q9H173 461 aa18.48■□□□□ 0.55
TRAPPC9-205ENST00000518839 COL24A1Q17RW2 1714 aa18.48■□□□□ 0.55
TRAPPC9-205ENST00000518839 DDX60Q8IY21 1712 aaKnown RBP18.48■□□□□ 0.55
TRAPPC9-205ENST00000518839 ERC2O15083 957 aa18.47■□□□□ 0.55
TRAPPC9-205ENST00000518839 IL15P40933 162 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC9-205ENST00000518839 CTSWP56202 376 aa18.47■□□□□ 0.55
TRAPPC9-205ENST00000518839 SUSD4Q5VX71 490 aa18.47■□□□□ 0.55
TRAPPC9-205ENST00000518839 PLSCR1O15162 318 aa18.46■□□□□ 0.55
TRAPPC9-205ENST00000518839 IFIT5Q13325 482 aaKnown RBP18.46■□□□□ 0.55
TRAPPC9-205ENST00000518839 TRAPPC3LQ5T215 181 aa18.46■□□□□ 0.55
TRAPPC9-205ENST00000518839 NUTM1Q86Y26 1132 aa18.46■□□□□ 0.55
TRAPPC9-205ENST00000518839 GPR108Q9NPR9 543 aa18.46■□□□□ 0.55
TRAPPC9-205ENST00000518839 EYA2O00167 538 aa18.45■□□□□ 0.54
TRAPPC9-205ENST00000518839 GLRX3O76003 335 aaKnown RBP18.45■□□□□ 0.54
TRAPPC9-205ENST00000518839 NTSR2O95665 410 aa18.45■□□□□ 0.54
TRAPPC9-205ENST00000518839 SDSP20132 328 aa18.45■□□□□ 0.54
TRAPPC9-205ENST00000518839 TAF7LQ5H9L4 462 aa18.45■□□□□ 0.54
TRAPPC9-205ENST00000518839 AACSQ86V21 672 aa18.45■□□□□ 0.54
TRAPPC9-205ENST00000518839 KLHDC4Q8TBB5 520 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms