RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 EDC3Q96F86 508 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 TM6SF1Q9BZW5 370 aa10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 PIP4K2AP48426 406 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 DNM1Q05193 864 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 TPRNQ4KMQ1 711 aa10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 LMOD2Q6P5Q4 547 aa10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 ZNF790Q6PG37 636 aa10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 ZNF589Q86UQ0 364 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 JARID2Q92833 1246 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 NEURL1BA8MQ27 555 aa10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 FUCA2Q9BTY2 467 aa10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 SCN11AQ9UI33 1791 aa10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 TCEANC2Q96MN5 208 aa10.15□□□□□ -0.78
CTNNA1-210ENST00000518825 BOLA2Q9H3K6 86 aa10.15□□□□□ -0.78
CTNNA1-210ENST00000518825 SMC3Q9UQE7 1217 aa10.15□□□□□ -0.78
CTNNA1-210ENST00000518825 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-210ENST00000518825 SLC27A2O14975 620 aa10.15□□□□□ -0.78
CTNNA1-210ENST00000518825 MYL6BP14649 208 aa10.15□□□□□ -0.78
CTNNA1-210ENST00000518825 ERC1Q8IUD2 1116 aa10.15□□□□□ -0.78
CTNNA1-210ENST00000518825 NFATC2IPQ8NCF5 419 aa10.15□□□□□ -0.78
CTNNA1-210ENST00000518825 CHMP4AQ9BY43 222 aa10.15□□□□□ -0.78
CTNNA1-210ENST00000518825 JCADQ9P266 1359 aa10.15□□□□□ -0.78
CTNNA1-210ENST00000518825 MED23Q9ULK4 1368 aa10.15□□□□□ -0.78
CTNNA1-210ENST00000518825 AP5Z1O43299 807 aa10.15□□□□□ -0.79
CTNNA1-210ENST00000518825 FIBPO43427 364 aa10.15□□□□□ -0.79
CTNNA1-210ENST00000518825 MEGF6O75095 1541 aa10.15□□□□□ -0.79
CTNNA1-210ENST00000518825 RFX5P48382 616 aaPredicted RBP10.15□□□□□ -0.79
CTNNA1-210ENST00000518825 ZC3H6P61129 1189 aaKnown RBP10.15□□□□□ -0.79
CTNNA1-210ENST00000518825 GCKRQ14397 625 aa10.15□□□□□ -0.79
CTNNA1-210ENST00000518825 ALS2Q96Q42 1657 aa10.15□□□□□ -0.79
CTNNA1-210ENST00000518825 NDUFB9Q9Y6M9 179 aa10.15□□□□□ -0.79
CTNNA1-210ENST00000518825 UBE2HP62256 183 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 KRT28Q7Z3Y7 464 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 MPNDQ8N594 471 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 XAGE3Q8WTP9 111 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 RUFY2Q8WXA3 655 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 DDX17Q92841 729 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 SLC52A2Q9HAB3 445 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 USP16Q9Y5T5 823 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 CYP46A1Q9Y6A2 500 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 TOB2Q14106 344 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 CCDC183Q5T5S1 534 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 COPS6Q7L5N1 327 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 ZNF496Q96IT1 587 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 GLI3P10071 1580 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 MST1RQ04912 1400 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 NPHP3Q7Z494 1330 aa10.14□□□□□ -0.79
CTNNA1-210ENST00000518825 HCLS1P14317 486 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-210ENST00000518825 PHKG2P15735 406 aa10.13□□□□□ -0.79
CTNNA1-210ENST00000518825 FAM173BQ6P4H8 233 aa10.13□□□□□ -0.79
CTNNA1-210ENST00000518825 SYAP1Q96A49 352 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-210ENST00000518825 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.13□□□□□ -0.799e-8■■□□□ 13.4
CTNNA1-210ENST00000518825 COL18A1P39060 1754 aa10.13□□□□□ -0.79
CTNNA1-210ENST00000518825 C1orf167Q5SNV9 1468 aa10.13□□□□□ -0.79
CTNNA1-210ENST00000518825 G3BP1Q13283 466 aaKnown RBP eCLIP10.13□□□□□ -0.796e-8■■■□□ 14.6
CTNNA1-210ENST00000518825 USP25Q9UHP3 1055 aa10.13□□□□□ -0.79
CTNNA1-210ENST00000518825 DBNLQ9UJU6 430 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-210ENST00000518825 PTPN12Q05209 780 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 GIMAP6Q6P9H5 292 aa10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 CDC37L1Q7L3B6 337 aa10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 RIC3Q7Z5B4 369 aa10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 ZNF830Q96NB3 372 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 MYD88Q99836 296 aa10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 CCDC39Q9UFE4 941 aa10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 GPATCH3Q96I76 525 aa10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 METTL22Q9BUU2 404 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 SH2B1Q9NRF2 756 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 R3HCC1Q9Y3T6 440 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 TAF5LO75529 589 aa10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 TPM2P07951 284 aa10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 ZSCAN31Q96LW9 406 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-210ENST00000518825 CYP27B1O15528 508 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 DDX58O95786 925 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 LARP1Q6PKG0 1096 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 TTC6Q86TZ1 520 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 MCM5P33992 734 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 CASP7P55210 303 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 TFCP2Q12800 502 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 FSD1Q9BTV5 496 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 ADAMTSL3P82987 1691 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 PHF14O94880 888 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 RPS6KB1P23443 525 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 USPL1Q5W0Q7 1092 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 FERMT3Q86UX7 667 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 SEC62Q99442 399 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 COPRSQ9NQ92 184 aa10.11□□□□□ -0.79
CTNNA1-210ENST00000518825 VPS37CA5D8V6 355 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 RRP9O43818 475 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 ZKSCAN1P17029 563 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 TSGA10IPQ3SY00 556 aa10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 RABL6Q3YEC7 729 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 SLFNL1Q499Z3 407 aa10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 ZNF609O15014 1411 aa10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 ARFGEF2Q9Y6D5 1785 aa10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 ADCY5O95622 1261 aa10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 HSP90AA2PQ14568 343 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 UVSSAQ2YD98 709 aa10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 CCDC129Q6ZRS4 1044 aa10.1□□□□□ -0.79
CTNNA1-210ENST00000518825 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms