RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 MRC1P22897 1456 aa7.68□□□□□ -1.18
SPIDR-208ENST00000518711 TRPM7Q96QT4 1865 aa7.68□□□□□ -1.18
SPIDR-208ENST00000518711 TTC28Q96AY4 2481 aa7.68□□□□□ -1.18
SPIDR-208ENST00000518711 C21orf2O43822 256 aa7.68□□□□□ -1.18
SPIDR-208ENST00000518711 PRR5LQ6MZQ0 368 aa7.68□□□□□ -1.18
SPIDR-208ENST00000518711 Q7L0L9 218 aa7.68□□□□□ -1.18
SPIDR-208ENST00000518711 RTKN2Q8IZC4 609 aa7.68□□□□□ -1.18
SPIDR-208ENST00000518711 ZNF296Q8WUU4 475 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-208ENST00000518711 SYMPKQ92797 1274 aaKnown RBP7.68□□□□□ -1.18
SPIDR-208ENST00000518711 ZNF622Q969S3 477 aaKnown RBP eCLIP7.68□□□□□ -1.18
SPIDR-208ENST00000518711 SETDB2Q96T68 719 aa7.68□□□□□ -1.18
SPIDR-208ENST00000518711 ZBTB1Q9Y2K1 713 aa7.68□□□□□ -1.18
SPIDR-208ENST00000518711 TJP1Q07157 1748 aa7.68□□□□□ -1.18
SPIDR-208ENST00000518711 SCN11AQ9UI33 1791 aa7.68□□□□□ -1.18
SPIDR-208ENST00000518711 KIAA0100Q14667 2235 aaKnown RBP7.68□□□□□ -1.18
SPIDR-208ENST00000518711 PIEZO1Q92508 2521 aa7.67□□□□□ -1.18
SPIDR-208ENST00000518711 FAM155AB1AL88 458 aaPredicted RBP7.67□□□□□ -1.18
SPIDR-208ENST00000518711 AEBP1Q8IUX7 1158 aa7.67□□□□□ -1.18
SPIDR-208ENST00000518711 LGR6Q9HBX8 967 aa7.67□□□□□ -1.18
SPIDR-208ENST00000518711 ARIH1Q9Y4X5 557 aaPredicted RBP7.67□□□□□ -1.18
SPIDR-208ENST00000518711 ZNF541Q9H0D2 1346 aa7.67□□□□□ -1.18
SPIDR-208ENST00000518711 LAMB4A4D0S4 1761 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 FZD9O00144 591 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 TNFRSF10AO00220 468 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 NPR1P16066 1061 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 TNNT2P45379 298 aaPredicted RBP7.66□□□□□ -1.18
SPIDR-208ENST00000518711 ST5P78524 1137 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 CCDC93Q567U6 631 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 TBC1D9BQ66K14 1250 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 CC2D2BQ6DHV5 1058 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 PRPF40BQ6NWY9 871 aaKnown RBP7.66□□□□□ -1.18
SPIDR-208ENST00000518711 NPM2Q86SE8 214 aaKnown RBP7.66□□□□□ -1.18
SPIDR-208ENST00000518711 MORC1Q86VD1 984 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 TTC5Q8N0Z6 440 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 GPC2Q8N158 579 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 CNBD1Q8NA66 436 aa7.66□□□□□ -1.18
SPIDR-208ENST00000518711 BRCA2P51587 3418 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 CANXP27824 592 aaKnown RBP7.65□□□□□ -1.18
SPIDR-208ENST00000518711 ALDH1B1P30837 517 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 HUNKP57058 714 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 FKBP4Q02790 459 aaKnown RBP eCLIP7.65□□□□□ -1.18
SPIDR-208ENST00000518711 SLC39A6Q13433 755 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 ZNF790Q6PG37 636 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 ALYREFQ86V81 257 aaKnown RBP7.65□□□□□ -1.18
SPIDR-208ENST00000518711 CCDC102AQ96A19 550 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 CSRNP1Q96S65 589 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 PSMD1Q99460 953 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 PAPPA2Q9BXP8 1791 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 VPS33BQ9H267 617 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 PANK3Q9H999 370 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 ZNF408Q9H9D4 720 aa7.65□□□□□ -1.18
SPIDR-208ENST00000518711 SPTBN5Q9NRC6 3674 aaKnown RBP7.65□□□□□ -1.19
SPIDR-208ENST00000518711 HEG1Q9ULI3 1381 aa7.64□□□□□ -1.19
SPIDR-208ENST00000518711 CLSPNQ9HAW4 1339 aa7.64□□□□□ -1.19
SPIDR-208ENST00000518711 CAMTA2O94983 1202 aa7.64□□□□□ -1.19
SPIDR-208ENST00000518711 RGMBQ6NW40 437 aa7.64□□□□□ -1.19
SPIDR-208ENST00000518711 SAMD1Q6SPF0 538 aaPredicted RBP7.64□□□□□ -1.19
SPIDR-208ENST00000518711 TPTE2Q6XPS3 522 aa7.64□□□□□ -1.19
SPIDR-208ENST00000518711 DPF3Q92784 378 aa7.64□□□□□ -1.19
SPIDR-208ENST00000518711 P2RX7Q99572 595 aaKnown RBP7.64□□□□□ -1.19
SPIDR-208ENST00000518711 TMEM106CQ9BVX2 250 aa7.64□□□□□ -1.19
SPIDR-208ENST00000518711 ZNF652Q9Y2D9 606 aa7.64□□□□□ -1.19
SPIDR-208ENST00000518711 KNSTRNQ9Y448 316 aa7.64□□□□□ -1.19
SPIDR-208ENST00000518711 LMOD1P29536 600 aaPredicted RBP7.63□□□□□ -1.19
SPIDR-208ENST00000518711 MTHFSDQ2M296 383 aaKnown RBP7.63□□□□□ -1.19
SPIDR-208ENST00000518711 USP50Q70EL3 339 aaPredicted RBP7.63□□□□□ -1.19
SPIDR-208ENST00000518711 JDP2Q8WYK2 163 aa7.63□□□□□ -1.19
SPIDR-208ENST00000518711 ZNF496Q96IT1 587 aaPredicted RBP7.63□□□□□ -1.19
SPIDR-208ENST00000518711 FMNL2Q96PY5 1086 aa7.63□□□□□ -1.19
SPIDR-208ENST00000518711 ANKRD31Q8N7Z5 1873 aa7.63□□□□□ -1.19
SPIDR-208ENST00000518711 SLX4Q8IY92 1834 aa7.63□□□□□ -1.19
SPIDR-208ENST00000518711 AKAP11Q9UKA4 1901 aa7.62□□□□□ -1.19
SPIDR-208ENST00000518711 LAMA3Q16787 3333 aa7.62□□□□□ -1.19
SPIDR-208ENST00000518711 RBBP6Q7Z6E9 1792 aaKnown RBP7.62□□□□□ -1.19
SPIDR-208ENST00000518711 UBR2Q8IWV8 1755 aa7.62□□□□□ -1.19
SPIDR-208ENST00000518711 GNAT3A8MTJ3 354 aa7.62□□□□□ -1.19
SPIDR-208ENST00000518711 TBC1D8O95759 1140 aa7.62□□□□□ -1.19
SPIDR-208ENST00000518711 NBPF5PQ86XG9 351 aaPredicted RBP7.62□□□□□ -1.19
SPIDR-208ENST00000518711 REM2Q8IYK8 340 aaPredicted RBP7.62□□□□□ -1.19
SPIDR-208ENST00000518711 GAS2L2Q8NHY3 880 aa7.62□□□□□ -1.19
SPIDR-208ENST00000518711 COL26A1Q96A83 441 aa7.62□□□□□ -1.19
SPIDR-208ENST00000518711 TBC1D2BQ9UPU7 963 aa7.62□□□□□ -1.19
SPIDR-208ENST00000518711 ARFGEF2Q9Y6D5 1785 aa7.61□□□□□ -1.19
SPIDR-208ENST00000518711 CEMIPQ8WUJ3 1361 aa7.61□□□□□ -1.19
SPIDR-208ENST00000518711 RPTORQ8N122 1335 aa7.61□□□□□ -1.19
SPIDR-208ENST00000518711 GPR25O00155 361 aa7.61□□□□□ -1.19
SPIDR-208ENST00000518711 NPHP1O15259 732 aa7.61□□□□□ -1.19
SPIDR-208ENST00000518711 HOXA10P31260 410 aaPredicted RBP7.61□□□□□ -1.19
SPIDR-208ENST00000518711 IARSP41252 1262 aaKnown RBP7.61□□□□□ -1.19
SPIDR-208ENST00000518711 EPS15P42566 896 aa7.61□□□□□ -1.19
SPIDR-208ENST00000518711 ZNF157P51786 506 aaPredicted RBP7.61□□□□□ -1.19
SPIDR-208ENST00000518711 EIF4G2P78344 907 aaKnown RBP eCLIP7.61□□□□□ -1.19
SPIDR-208ENST00000518711 TEFQ10587 303 aa7.61□□□□□ -1.19
SPIDR-208ENST00000518711 CRY2Q49AN0 593 aa7.61□□□□□ -1.19
SPIDR-208ENST00000518711 AMER1Q5JTC6 1135 aaPredicted RBP7.61□□□□□ -1.19
SPIDR-208ENST00000518711 IL17REQ8NFR9 667 aa7.61□□□□□ -1.19
SPIDR-208ENST00000518711 ZC3H15Q8WU90 426 aaKnown RBP7.61□□□□□ -1.19
SPIDR-208ENST00000518711 GLIS2Q9BZE0 524 aaPredicted RBP7.61□□□□□ -1.19
SPIDR-208ENST00000518711 PGAP2Q9UHJ9 254 aa7.61□□□□□ -1.19
SPIDR-208ENST00000518711 CACNA1GO43497 2377 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms