RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 MAP4K4O95819 1239 aaPredicted RBP20.28■□□□□ 0.84
PCM1-206ENST00000518537 FOXO4P98177 505 aa20.28■□□□□ 0.84
PCM1-206ENST00000518537 VPS72Q15906 364 aa20.28■□□□□ 0.84
PCM1-206ENST00000518537 CNTROBQ8N137 903 aa20.28■□□□□ 0.84
PCM1-206ENST00000518537 ESYT1Q9BSJ8 1104 aa20.28■□□□□ 0.84
PCM1-206ENST00000518537 ECHDC1Q9NTX5 307 aa20.28■□□□□ 0.84
PCM1-206ENST00000518537 MAP3K15Q6ZN16 1313 aa20.28■□□□□ 0.84
PCM1-206ENST00000518537 PTPN12Q05209 780 aaKnown RBP20.28■□□□□ 0.84
PCM1-206ENST00000518537 FAM98CQ17RN3 349 aaKnown RBP20.28■□□□□ 0.84
PCM1-206ENST00000518537 SNX21Q969T3 373 aa20.28■□□□□ 0.84
PCM1-206ENST00000518537 CHMP3Q9Y3E7 222 aa20.28■□□□□ 0.84
PCM1-206ENST00000518537 ZBTB1Q9Y2K1 713 aa20.27■□□□□ 0.83
PCM1-206ENST00000518537 BCL9LQ86UU0 1499 aa20.26■□□□□ 0.83
PCM1-206ENST00000518537 TRIM28Q13263 835 aaKnown RBP20.26■□□□□ 0.83
PCM1-206ENST00000518537 EAF2Q96CJ1 260 aaPredicted RBP20.26■□□□□ 0.83
PCM1-206ENST00000518537 SPATA31A6Q5VVP1 1343 aa20.26■□□□□ 0.83
PCM1-206ENST00000518537 GIGYF2Q6Y7W6 1299 aaKnown RBP20.25■□□□□ 0.83
PCM1-206ENST00000518537 CCDC8Q9H0W5 538 aaPredicted RBP20.25■□□□□ 0.83
PCM1-206ENST00000518537 SLKQ9H2G2 1235 aaPredicted RBP20.25■□□□□ 0.83
PCM1-206ENST00000518537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.25■□□□□ 0.83
PCM1-206ENST00000518537 HSP90AB3PQ58FF7 597 aa20.24■□□□□ 0.83
PCM1-206ENST00000518537 IL6STP40189 918 aaPredicted RBP20.24■□□□□ 0.83
PCM1-206ENST00000518537 FNBP4Q8N3X1 1017 aaPredicted RBP20.24■□□□□ 0.83
PCM1-206ENST00000518537 CERKQ8TCT0 537 aa20.24■□□□□ 0.83
PCM1-206ENST00000518537 ATP6V1AP38606 617 aa20.23■□□□□ 0.83
PCM1-206ENST00000518537 RABEP1Q15276 862 aa20.22■□□□□ 0.83
PCM1-206ENST00000518537 HLFQ16534 295 aa20.22■□□□□ 0.83
PCM1-206ENST00000518537 PCCAP05165 728 aaPredicted RBP20.22■□□□□ 0.83
PCM1-206ENST00000518537 TFCP2Q12800 502 aa20.22■□□□□ 0.83
PCM1-206ENST00000518537 SPRYD3Q8NCJ5 442 aa20.22■□□□□ 0.83
PCM1-206ENST00000518537 SMARCC1Q92922 1105 aaPredicted RBP20.22■□□□□ 0.83
PCM1-206ENST00000518537 USP21Q9UK80 565 aa20.22■□□□□ 0.83
PCM1-206ENST00000518537 LOC102724428A0A0B4J2F2 783 aa20.21■□□□□ 0.83
PCM1-206ENST00000518537 SIK1P57059 783 aa20.21■□□□□ 0.83
PCM1-206ENST00000518537 MYT1Q01538 1121 aa20.21■□□□□ 0.83
PCM1-206ENST00000518537 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
PCM1-206ENST00000518537 ANKRD36CQ5JPF3 1778 aa20.21■□□□□ 0.83
PCM1-206ENST00000518537 ANO2Q9NQ90 1003 aa20.21■□□□□ 0.83
PCM1-206ENST00000518537 CCDC87Q9NVE4 849 aa20.21■□□□□ 0.83
PCM1-206ENST00000518537 TLR7Q9NYK1 1049 aaKnown RBP20.21■□□□□ 0.83
PCM1-206ENST00000518537 MCCP23508 829 aa20.2■□□□□ 0.82
PCM1-206ENST00000518537 GPTP24298 496 aa20.2■□□□□ 0.82
PCM1-206ENST00000518537 TNNI3KQ59H18 835 aa20.2■□□□□ 0.82
PCM1-206ENST00000518537 ZBTB38Q8NAP3 1195 aaPredicted RBP20.2■□□□□ 0.82
PCM1-206ENST00000518537 FPGT-TNNI3KV9GXZ4 949 aa20.2■□□□□ 0.82
PCM1-206ENST00000518537 PALLDQ8WX93 1383 aa20.2■□□□□ 0.82
PCM1-206ENST00000518537 ERVV-1B6SEH8 477 aa20.19■□□□□ 0.82
PCM1-206ENST00000518537 NLRP10Q86W26 655 aa20.19■□□□□ 0.82
PCM1-206ENST00000518537 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
PCM1-206ENST00000518537 FAM89AQ96GI7 184 aa20.19■□□□□ 0.82
PCM1-206ENST00000518537 TBC1D2BQ9UPU7 963 aa20.19■□□□□ 0.82
PCM1-206ENST00000518537 NUP98P52948 1817 aa20.19■□□□□ 0.82
PCM1-206ENST00000518537 KCNQ2O43526 872 aa20.18■□□□□ 0.82
PCM1-206ENST00000518537 CRKLP46109 303 aaKnown RBP20.18■□□□□ 0.82
PCM1-206ENST00000518537 MEX3CQ5U5Q3 659 aaKnown RBP20.18■□□□□ 0.82
PCM1-206ENST00000518537 INTS5Q6P9B9 1019 aaKnown RBP20.18■□□□□ 0.82
PCM1-206ENST00000518537 ANTXR1Q9H6X2 564 aa20.18■□□□□ 0.82
PCM1-206ENST00000518537 CICQ96RK0 1608 aaPredicted RBP20.18■□□□□ 0.82
PCM1-206ENST00000518537 PLA2G12BQ9BX93 195 aa20.18■□□□□ 0.82
PCM1-206ENST00000518537 DIAPH3Q9NSV4 1193 aa20.18■□□□□ 0.82
PCM1-206ENST00000518537 ITPK1Q13572 414 aa20.17■□□□□ 0.82
PCM1-206ENST00000518537 CDHR2Q9BYE9 1310 aa20.17■□□□□ 0.82
PCM1-206ENST00000518537 K7ELQ4 463 aaPredicted RBP20.17■□□□□ 0.82
PCM1-206ENST00000518537 IL15P40933 162 aaPredicted RBP20.17■□□□□ 0.82
PCM1-206ENST00000518537 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
PCM1-206ENST00000518537 CCDC57Q2TAC2 916 aa20.17■□□□□ 0.82
PCM1-206ENST00000518537 RUFY2Q8WXA3 655 aa20.17■□□□□ 0.82
PCM1-206ENST00000518537 BOLA2Q9H3K6 86 aa20.17■□□□□ 0.82
PCM1-206ENST00000518537 SGSM2O43147 1006 aa20.16■□□□□ 0.82
PCM1-206ENST00000518537 EPB41L2O43491 1005 aaKnown RBP20.16■□□□□ 0.82
PCM1-206ENST00000518537 CD2BP2O95400 341 aaKnown RBP20.16■□□□□ 0.82
PCM1-206ENST00000518537 ATG9AQ7Z3C6 839 aa20.16■□□□□ 0.82
PCM1-206ENST00000518537 ZNF594Q96JF6 807 aaPredicted RBP20.16■□□□□ 0.82
PCM1-206ENST00000518537 RREB1Q92766 1687 aa20.16■□□□□ 0.82
PCM1-206ENST00000518537 EYA2O00167 538 aa20.15■□□□□ 0.82
PCM1-206ENST00000518537 NFKBIBQ15653 356 aa20.15■□□□□ 0.82
PCM1-206ENST00000518537 CWC27Q6UX04 472 aaKnown RBP20.15■□□□□ 0.82
PCM1-206ENST00000518537 DBNLQ9UJU6 430 aaKnown RBP20.15■□□□□ 0.82
PCM1-206ENST00000518537 CIAO1O76071 339 aa20.14■□□□□ 0.81
PCM1-206ENST00000518537 IL25Q9H293 177 aa20.14■□□□□ 0.81
PCM1-206ENST00000518537 TRMT112Q9UI30 125 aaKnown RBP20.14■□□□□ 0.81
PCM1-206ENST00000518537 LRRC24Q50LG9 513 aa20.14■□□□□ 0.81
PCM1-206ENST00000518537 GPR108Q9NPR9 543 aa20.14■□□□□ 0.81
PCM1-206ENST00000518537 HIP1O00291 1037 aa20.13■□□□□ 0.81
PCM1-206ENST00000518537 ST18O60284 1047 aa20.13■□□□□ 0.81
PCM1-206ENST00000518537 CSF1RP07333 972 aa20.13■□□□□ 0.81
PCM1-206ENST00000518537 ATP5JP18859 108 aa20.13■□□□□ 0.81
PCM1-206ENST00000518537 HSPA1LP34931 641 aa20.13■□□□□ 0.81
PCM1-206ENST00000518537 TAF7LQ5H9L4 462 aa20.13■□□□□ 0.81
PCM1-206ENST00000518537 KIAA1211Q6ZU35 1233 aa20.13■□□□□ 0.81
PCM1-206ENST00000518537 ZNF34Q8IZ26 560 aa20.13■□□□□ 0.81
PCM1-206ENST00000518537 DBNDD2Q9BQY9 259 aa20.13■□□□□ 0.81
PCM1-206ENST00000518537 HSP90AA1P07900 732 aaKnown RBP20.12■□□□□ 0.81
PCM1-206ENST00000518537 ANAPC15P60006 121 aa20.12■□□□□ 0.81
PCM1-206ENST00000518537 CHMP5Q9NZZ3 219 aa20.12■□□□□ 0.81
PCM1-206ENST00000518537 THSD7AQ9UPZ6 1657 aa20.12■□□□□ 0.81
PCM1-206ENST00000518537 SYNE4Q8N205 404 aa20.12■□□□□ 0.81
PCM1-206ENST00000518537 CCDC85AQ96PX6 553 aaPredicted RBP20.12■□□□□ 0.81
PCM1-206ENST00000518537 IRS4O14654 1257 aaPredicted RBP20.11■□□□□ 0.81
PCM1-206ENST00000518537 IFIT5Q13325 482 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms