RNA–Protein interactions for RNA: ENST00000518080.2

HMBOX1-205, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-205ENST00000518080 SRGAP3O43295 1099 aa12.46□□□□□ -0.41
HMBOX1-205ENST00000518080 RXRBP28702 533 aa12.46□□□□□ -0.41
HMBOX1-205ENST00000518080 ATP8B2P98198 1209 aa12.46□□□□□ -0.41
HMBOX1-205ENST00000518080 NUCB1Q02818 461 aa12.46□□□□□ -0.41
HMBOX1-205ENST00000518080 ITPK1Q13572 414 aa12.46□□□□□ -0.41
HMBOX1-205ENST00000518080 UBE3BQ7Z3V4 1068 aa12.46□□□□□ -0.41
HMBOX1-205ENST00000518080 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
HMBOX1-205ENST00000518080 LAMB2P55268 1798 aa12.46□□□□□ -0.42
HMBOX1-205ENST00000518080 C4AP0C0L4 1744 aa12.45□□□□□ -0.42
HMBOX1-205ENST00000518080 AK9Q5TCS8 1911 aa12.45□□□□□ -0.42
HMBOX1-205ENST00000518080 CNTNAP4Q9C0A0 1308 aa12.45□□□□□ -0.42
HMBOX1-205ENST00000518080 A0A087WZG4 1122 aa12.45□□□□□ -0.42
HMBOX1-205ENST00000518080 OS9Q13438 667 aaPredicted RBP12.45□□□□□ -0.42
HMBOX1-205ENST00000518080 CCDC191Q8NCU4 936 aa12.45□□□□□ -0.42
HMBOX1-205ENST00000518080 BCL11BQ9C0K0 894 aaPredicted RBP12.45□□□□□ -0.42
HMBOX1-205ENST00000518080 DCTPP1Q9H773 170 aa12.45□□□□□ -0.42
HMBOX1-205ENST00000518080 UTYO14607 1347 aa12.44□□□□□ -0.42
HMBOX1-205ENST00000518080 PNMA6EA0A0J9YXQ4 647 aa12.44□□□□□ -0.42
HMBOX1-205ENST00000518080 PRR29P0C7W0 189 aa12.44□□□□□ -0.42
HMBOX1-205ENST00000518080 HSP90AB4PQ58FF6 505 aa12.44□□□□□ -0.42
HMBOX1-205ENST00000518080 PPP1R42Q7Z4L9 355 aa12.44□□□□□ -0.42
HMBOX1-205ENST00000518080 SUCLG2Q96I99 432 aa12.44□□□□□ -0.42
HMBOX1-205ENST00000518080 ZNF652Q9Y2D9 606 aa12.44□□□□□ -0.42
HMBOX1-205ENST00000518080 TNS1Q9HBL0 1735 aaKnown RBP12.44□□□□□ -0.42
HMBOX1-205ENST00000518080 TCIRG1Q13488 830 aa12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 INTS5Q6P9B9 1019 aaKnown RBP12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 GIGYF2Q6Y7W6 1299 aaKnown RBP12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 PTF1AQ7RTS3 328 aa12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 LINC00116Q8NCU8 138 aa12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 BICC1Q9H694 974 aaKnown RBP12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 TSHZ2Q9NRE2 1034 aa12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 TBC1D2BQ9UPU7 963 aa12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 CHMP3Q9Y3E7 222 aa12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 RGPD3A6NKT7 1758 aaPredicted RBP12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 RGPD4Q7Z3J3 1758 aa12.43□□□□□ -0.42
HMBOX1-205ENST00000518080 UBR3Q6ZT12 1888 aa12.42□□□□□ -0.42
HMBOX1-205ENST00000518080 ERVV-1B6SEH8 477 aa12.42□□□□□ -0.42
HMBOX1-205ENST00000518080 SURF6O75683 361 aaKnown RBP12.42□□□□□ -0.42
HMBOX1-205ENST00000518080 GPTP24298 496 aa12.42□□□□□ -0.42
HMBOX1-205ENST00000518080 EIF5P55010 431 aaKnown RBP12.42□□□□□ -0.42
HMBOX1-205ENST00000518080 SSH3Q8TE77 659 aa12.42□□□□□ -0.42
HMBOX1-205ENST00000518080 AK7Q96M32 723 aa12.42□□□□□ -0.42
HMBOX1-205ENST00000518080 LRRCC1Q9C099 1032 aa12.42□□□□□ -0.42
HMBOX1-205ENST00000518080 CASZ1Q86V15 1759 aa12.42□□□□□ -0.42
HMBOX1-205ENST00000518080 GNPATO15228 680 aa12.41□□□□□ -0.42
HMBOX1-205ENST00000518080 RAB11FIP3O75154 756 aa12.41□□□□□ -0.42
HMBOX1-205ENST00000518080 TRIM37O94972 964 aa12.41□□□□□ -0.42
HMBOX1-205ENST00000518080 HMGB2P26583 209 aaKnown RBP12.41□□□□□ -0.42
HMBOX1-205ENST00000518080 KCNQ4P56696 695 aa12.41□□□□□ -0.42
HMBOX1-205ENST00000518080 MTX1Q13505 466 aa12.41□□□□□ -0.42
HMBOX1-205ENST00000518080 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
HMBOX1-205ENST00000518080 RTL5Q5HYW3 569 aaPredicted RBP12.41□□□□□ -0.42
HMBOX1-205ENST00000518080 ERC1Q8IUD2 1116 aa12.41□□□□□ -0.42
HMBOX1-205ENST00000518080 ISCA1Q9BUE6 129 aa12.41□□□□□ -0.42
HMBOX1-205ENST00000518080 SPEF2Q9C093 1822 aa12.4□□□□□ -0.42
HMBOX1-205ENST00000518080 JARID2Q92833 1246 aaPredicted RBP12.4□□□□□ -0.42
HMBOX1-205ENST00000518080 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.43
HMBOX1-205ENST00000518080 DDX60Q8IY21 1712 aaKnown RBP12.4□□□□□ -0.43
HMBOX1-205ENST00000518080 SMARCA5O60264 1052 aaPredicted RBP12.39□□□□□ -0.43
HMBOX1-205ENST00000518080 PCCAP05165 728 aaPredicted RBP12.39□□□□□ -0.43
HMBOX1-205ENST00000518080 PDE4AP27815 886 aa12.39□□□□□ -0.43
HMBOX1-205ENST00000518080 HLFQ16534 295 aa12.39□□□□□ -0.43
HMBOX1-205ENST00000518080 RC3H1Q5TC82 1133 aaKnown RBP12.39□□□□□ -0.43
HMBOX1-205ENST00000518080 RTCBQ9Y3I0 505 aaKnown RBP12.39□□□□□ -0.43
HMBOX1-205ENST00000518080 H7C1W4 665 aa12.38□□□□□ -0.43
HMBOX1-205ENST00000518080 ZPR1O75312 459 aa12.38□□□□□ -0.43
HMBOX1-205ENST00000518080 CAMTA2O94983 1202 aa12.38□□□□□ -0.43
HMBOX1-205ENST00000518080 TRIM28Q13263 835 aaKnown RBP12.38□□□□□ -0.43
HMBOX1-205ENST00000518080 G3BP1Q13283 466 aaKnown RBP eCLIP12.38□□□□□ -0.43
HMBOX1-205ENST00000518080 PARP10Q53GL7 1025 aa12.38□□□□□ -0.43
HMBOX1-205ENST00000518080 SLC27A3Q5K4L6 730 aa12.38□□□□□ -0.43
HMBOX1-205ENST00000518080 NLRP10Q86W26 655 aa12.38□□□□□ -0.43
HMBOX1-205ENST00000518080 KIF1BPQ96EK5 621 aa12.38□□□□□ -0.43
HMBOX1-205ENST00000518080 TRMT112Q9UI30 125 aaKnown RBP12.38□□□□□ -0.43
HMBOX1-205ENST00000518080 TUBGCP6Q96RT7 1819 aa12.38□□□□□ -0.43
HMBOX1-205ENST00000518080 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
HMBOX1-205ENST00000518080 PHF14O94880 888 aa12.37□□□□□ -0.43
HMBOX1-205ENST00000518080 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
HMBOX1-205ENST00000518080 HSP90B1P14625 803 aaKnown RBP12.37□□□□□ -0.43
HMBOX1-205ENST00000518080 CLCN6P51797 869 aa12.37□□□□□ -0.43
HMBOX1-205ENST00000518080 TAF7LQ5H9L4 462 aa12.37□□□□□ -0.43
HMBOX1-205ENST00000518080 LMBR1LQ6UX01 489 aa12.37□□□□□ -0.43
HMBOX1-205ENST00000518080 ZBTB38Q8NAP3 1195 aaPredicted RBP12.37□□□□□ -0.43
HMBOX1-205ENST00000518080 KAZALD1Q96I82 304 aa12.37□□□□□ -0.43
HMBOX1-205ENST00000518080 NIP7Q9Y221 180 aaKnown RBP eCLIP12.37□□□□□ -0.43
HMBOX1-205ENST00000518080 CDHR2Q9BYE9 1310 aa12.37□□□□□ -0.43
HMBOX1-205ENST00000518080 FAM177BA6PVY3 158 aa12.36□□□□□ -0.43
HMBOX1-205ENST00000518080 CASP7P55210 303 aa12.36□□□□□ -0.43
HMBOX1-205ENST00000518080 RABL6Q3YEC7 729 aaPredicted RBP12.36□□□□□ -0.43
HMBOX1-205ENST00000518080 RHPN1Q8TCX5 695 aa12.36□□□□□ -0.43
HMBOX1-205ENST00000518080 FAM89AQ96GI7 184 aa12.36□□□□□ -0.43
HMBOX1-205ENST00000518080 GPATCH3Q96I76 525 aa12.36□□□□□ -0.43
HMBOX1-205ENST00000518080 SIL1Q9H173 461 aa12.36□□□□□ -0.43
HMBOX1-205ENST00000518080 PA2G4Q9UQ80 394 aaKnown RBP12.36□□□□□ -0.43
HMBOX1-205ENST00000518080 UBN2Q6ZU65 1347 aa12.36□□□□□ -0.43
HMBOX1-205ENST00000518080 SH3TC1Q8TE82 1336 aa12.36□□□□□ -0.43
HMBOX1-205ENST00000518080 NPHP1O15259 732 aa12.35□□□□□ -0.43
HMBOX1-205ENST00000518080 APBA3O96018 575 aa12.35□□□□□ -0.43
HMBOX1-205ENST00000518080 RFC4P35249 363 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms