RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 ZNF622Q969S3 477 aaKnown RBP eCLIP18.65■□□□□ 0.588e-7■□□□□ 8.4
TOP1MT-203ENST00000517857 ZNF428Q96B54 188 aa18.65■□□□□ 0.58
TOP1MT-203ENST00000517857 FLIIQ13045 1269 aa18.64■□□□□ 0.57
TOP1MT-203ENST00000517857 G2E3Q7L622 706 aa18.64■□□□□ 0.57
TOP1MT-203ENST00000517857 MYD88Q99836 296 aa18.64■□□□□ 0.57
TOP1MT-203ENST00000517857 FKBP5Q13451 457 aaPredicted RBP18.63■□□□□ 0.57
TOP1MT-203ENST00000517857 TRMT112Q9UI30 125 aaKnown RBP18.63■□□□□ 0.57
TOP1MT-203ENST00000517857 MAP3K2Q9Y2U5 619 aa18.63■□□□□ 0.57
TOP1MT-203ENST00000517857 LAMB2P55268 1798 aa18.63■□□□□ 0.57
TOP1MT-203ENST00000517857 PI4KAP2A4QPH2 592 aa18.62■□□□□ 0.57
TOP1MT-203ENST00000517857 KSR2Q6VAB6 950 aa18.62■□□□□ 0.57
TOP1MT-203ENST00000517857 TTLL6Q8N841 843 aa18.62■□□□□ 0.57
TOP1MT-203ENST00000517857 PI4KAP1Q8N8J0 262 aa18.62■□□□□ 0.57
TOP1MT-203ENST00000517857 ISCA1Q9BUE6 129 aa18.62■□□□□ 0.57
TOP1MT-203ENST00000517857 RNF123Q5XPI4 1314 aa18.62■□□□□ 0.57
TOP1MT-203ENST00000517857 ADCY9O60503 1353 aa18.62■□□□□ 0.57
TOP1MT-203ENST00000517857 RIC1Q4ADV7 1423 aa18.62■□□□□ 0.57
TOP1MT-203ENST00000517857 DDX60Q8IY21 1712 aaKnown RBP18.61■□□□□ 0.57
TOP1MT-203ENST00000517857 SH3TC1Q8TE82 1336 aa18.61■□□□□ 0.57
TOP1MT-203ENST00000517857 NEXNQ0ZGT2 675 aa18.61■□□□□ 0.57
TOP1MT-203ENST00000517857 MASTLQ96GX5 879 aa18.61■□□□□ 0.57
TOP1MT-203ENST00000517857 METTL22Q9BUU2 404 aaPredicted RBP18.61■□□□□ 0.57
TOP1MT-203ENST00000517857 SRGNP10124 158 aa18.6■□□□□ 0.57
TOP1MT-203ENST00000517857 STYK1Q6J9G0 422 aa18.6■□□□□ 0.57
TOP1MT-203ENST00000517857 SLX4Q8IY92 1834 aa18.59■□□□□ 0.57
TOP1MT-203ENST00000517857 NPR1P16066 1061 aa18.59■□□□□ 0.57
TOP1MT-203ENST00000517857 TRMT2AQ8IZ69 625 aaKnown RBP18.59■□□□□ 0.57
TOP1MT-203ENST00000517857 RPGRQ92834 1020 aaKnown RBP18.59■□□□□ 0.57
TOP1MT-203ENST00000517857 CNKSR1Q969H4 720 aa18.59■□□□□ 0.57
TOP1MT-203ENST00000517857 ZNF219Q9P2Y4 722 aaPredicted RBP18.59■□□□□ 0.57
TOP1MT-203ENST00000517857 RTL5Q5HYW3 569 aaPredicted RBP18.58■□□□□ 0.56
TOP1MT-203ENST00000517857 ARHGAP27Q6ZUM4 889 aa18.58■□□□□ 0.56
TOP1MT-203ENST00000517857 CWC25Q9NXE8 425 aaPredicted RBP18.58■□□□□ 0.56
TOP1MT-203ENST00000517857 ZBED9Q6R2W3 1325 aa18.57■□□□□ 0.56
TOP1MT-203ENST00000517857 HCLS1P14317 486 aaPredicted RBP18.57■□□□□ 0.56
TOP1MT-203ENST00000517857 YY1P25490 414 aa18.57■□□□□ 0.56
TOP1MT-203ENST00000517857 TRIM28Q13263 835 aaKnown RBP18.57■□□□□ 0.56
TOP1MT-203ENST00000517857 SYNE4Q8N205 404 aa18.57■□□□□ 0.56
TOP1MT-203ENST00000517857 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
TOP1MT-203ENST00000517857 DNAAF4Q8WXU2 420 aa18.57■□□□□ 0.56
TOP1MT-203ENST00000517857 FAM89AQ96GI7 184 aa18.57■□□□□ 0.56
TOP1MT-203ENST00000517857 NLRP3Q96P20 1036 aa18.57■□□□□ 0.56
TOP1MT-203ENST00000517857 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
TOP1MT-203ENST00000517857 KLRG2A4D1S0 409 aaPredicted RBP18.56■□□□□ 0.56
TOP1MT-203ENST00000517857 PRPF40BQ6NWY9 871 aaKnown RBP18.56■□□□□ 0.56
TOP1MT-203ENST00000517857 SMC4Q9NTJ3 1288 aa18.56■□□□□ 0.56
TOP1MT-203ENST00000517857 CT47B1P0C2W7 299 aaPredicted RBP18.55■□□□□ 0.56
TOP1MT-203ENST00000517857 CWF19L2Q2TBE0 894 aaKnown RBP18.55■□□□□ 0.56
TOP1MT-203ENST00000517857 SLC10A5Q5PT55 438 aa18.55■□□□□ 0.56
TOP1MT-203ENST00000517857 C3orf67Q6ZVT6 689 aa18.55■□□□□ 0.56
TOP1MT-203ENST00000517857 SSH1Q8WYL5 1049 aa18.55■□□□□ 0.56
TOP1MT-203ENST00000517857 F6X3S4 739 aa18.54■□□□□ 0.56
TOP1MT-203ENST00000517857 C21orf2O43822 256 aa18.54■□□□□ 0.56
TOP1MT-203ENST00000517857 IGKV5-2P06315 115 aa18.54■□□□□ 0.56
TOP1MT-203ENST00000517857 CRY2Q49AN0 593 aa18.54■□□□□ 0.56
TOP1MT-203ENST00000517857 MRPL50Q8N5N7 158 aaKnown RBP18.54■□□□□ 0.56
TOP1MT-203ENST00000517857 ZBTB38Q8NAP3 1195 aaPredicted RBP18.54■□□□□ 0.56
TOP1MT-203ENST00000517857 RBM17Q96I25 401 aaKnown RBP18.54■□□□□ 0.56
TOP1MT-203ENST00000517857 MYH3P11055 1940 aa18.53■□□□□ 0.56
TOP1MT-203ENST00000517857 NEURL1BA8MQ27 555 aa18.53■□□□□ 0.56
TOP1MT-203ENST00000517857 IRS4O14654 1257 aaPredicted RBP18.53■□□□□ 0.56
TOP1MT-203ENST00000517857 ALDH1B1P30837 517 aa18.53■□□□□ 0.56
TOP1MT-203ENST00000517857 ALDH1L2Q3SY69 923 aa18.53■□□□□ 0.56
TOP1MT-203ENST00000517857 FER1L6Q2WGJ9 1857 aa18.52■□□□□ 0.56
TOP1MT-203ENST00000517857 PCCAP05165 728 aaPredicted RBP18.52■□□□□ 0.56
TOP1MT-203ENST00000517857 HSP90B1P14625 803 aaKnown RBP18.52■□□□□ 0.56
TOP1MT-203ENST00000517857 SLC4A10Q6U841 1118 aa18.52■□□□□ 0.56
TOP1MT-203ENST00000517857 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
TOP1MT-203ENST00000517857 CCDC88AQ3V6T2 1871 aa18.52■□□□□ 0.55
TOP1MT-203ENST00000517857 GOLGB1Q14789 3259 aaKnown RBP18.52■□□□□ 0.55
TOP1MT-203ENST00000517857 SOGA3Q5TF21 947 aa18.51■□□□□ 0.55
TOP1MT-203ENST00000517857 LINS1Q8NG48 757 aa18.51■□□□□ 0.55
TOP1MT-203ENST00000517857 SBF1O95248 1867 aa18.51■□□□□ 0.55
TOP1MT-203ENST00000517857 TAF1P21675 1872 aa18.51■□□□□ 0.55
TOP1MT-203ENST00000517857 PTPRCP08575 1304 aa18.5■□□□□ 0.55
TOP1MT-203ENST00000517857 HOXA10P31260 410 aaPredicted RBP18.5■□□□□ 0.55
TOP1MT-203ENST00000517857 RASSF7Q02833 373 aa18.5■□□□□ 0.55
TOP1MT-203ENST00000517857 DDX46Q7L014 1031 aaKnown RBP18.5■□□□□ 0.55
TOP1MT-203ENST00000517857 ABCC4O15439 1325 aa18.49■□□□□ 0.55
TOP1MT-203ENST00000517857 PPEF1O14829 653 aaPredicted RBP18.49■□□□□ 0.55
TOP1MT-203ENST00000517857 CCDC93Q567U6 631 aa18.49■□□□□ 0.55
TOP1MT-203ENST00000517857 UBE3BQ7Z3V4 1068 aa18.49■□□□□ 0.55
TOP1MT-203ENST00000517857 CRAMP1Q96RY5 1269 aa18.49■□□□□ 0.55
TOP1MT-203ENST00000517857 TIAM2Q8IVF5 1701 aa18.49■□□□□ 0.55
TOP1MT-203ENST00000517857 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
TOP1MT-203ENST00000517857 GCKRQ14397 625 aa18.48■□□□□ 0.55
TOP1MT-203ENST00000517857 PDE8AO60658 829 aa18.47■□□□□ 0.55
TOP1MT-203ENST00000517857 RARSP54136 660 aaKnown RBP18.47■□□□□ 0.55
TOP1MT-203ENST00000517857 BEND3Q5T5X7 828 aa18.47■□□□□ 0.55
TOP1MT-203ENST00000517857 SRCIN1Q9C0H9 1055 aa18.47■□□□□ 0.55
TOP1MT-203ENST00000517857 TMX4Q9H1E5 349 aaPredicted RBP18.47■□□□□ 0.55
TOP1MT-203ENST00000517857 RNF181Q9P0P0 153 aa18.47■□□□□ 0.55
TOP1MT-203ENST00000517857 UTRNP46939 3433 aa18.46■□□□□ 0.55
TOP1MT-203ENST00000517857 NFKBIEO00221 500 aa18.46■□□□□ 0.55
TOP1MT-203ENST00000517857 GRAPQ13588 217 aa18.46■□□□□ 0.55
TOP1MT-203ENST00000517857 C9orf131Q5VYM1 1079 aa18.46■□□□□ 0.55
TOP1MT-203ENST00000517857 OLFM4Q6UX06 510 aa18.46■□□□□ 0.55
TOP1MT-203ENST00000517857 GRAPLQ8TC17 118 aaPredicted RBP18.46■□□□□ 0.55
TOP1MT-203ENST00000517857 CCDC85AQ96PX6 553 aaPredicted RBP18.46■□□□□ 0.55
TOP1MT-203ENST00000517857 TAOK3Q9H2K8 898 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms