RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 KAZALD1Q96I82 304 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 MPHOSPH8Q99549 860 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 UPF3BQ9BZI7 483 aaKnown RBP11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 CEP126Q9P2H0 1117 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 PALLDQ8WX93 1383 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 DBNDD2Q9BQY9 259 aa11.91□□□□□ -0.5
EFCAB13-203ENST00000517484 RGPD5Q99666 1765 aa11.9□□□□□ -0.5
EFCAB13-203ENST00000517484 DLG5Q8TDM6 1919 aa11.9□□□□□ -0.5
EFCAB13-203ENST00000517484 APBA3O96018 575 aa11.9□□□□□ -0.5
EFCAB13-203ENST00000517484 GPATCH3Q96I76 525 aa11.9□□□□□ -0.5
EFCAB13-203ENST00000517484 SEC31BQ9NQW1 1179 aa11.9□□□□□ -0.5
EFCAB13-203ENST00000517484 RGS12O14924 1447 aa11.9□□□□□ -0.5
EFCAB13-203ENST00000517484 SLIT3O75094 1523 aa11.9□□□□□ -0.51
EFCAB13-203ENST00000517484 BECN1Q14457 450 aa11.9□□□□□ -0.51
EFCAB13-203ENST00000517484 HSP90AB4PQ58FF6 505 aa11.9□□□□□ -0.51
EFCAB13-203ENST00000517484 SSH3Q8TE77 659 aa11.9□□□□□ -0.51
EFCAB13-203ENST00000517484 CHMP4CQ96CF2 233 aa11.9□□□□□ -0.51
EFCAB13-203ENST00000517484 GREM2Q9H772 168 aa11.9□□□□□ -0.51
EFCAB13-203ENST00000517484 VPS72Q15906 364 aa11.89□□□□□ -0.51
EFCAB13-203ENST00000517484 DDRGK1Q96HY6 314 aa11.89□□□□□ -0.51
EFCAB13-203ENST00000517484 CDCA7Q9BWT1 371 aaPredicted RBP11.89□□□□□ -0.51
EFCAB13-203ENST00000517484 TFCP2L1Q9NZI6 479 aa11.89□□□□□ -0.51
EFCAB13-203ENST00000517484 PPFIA3O75145 1194 aa11.89□□□□□ -0.51
EFCAB13-203ENST00000517484 NKX1-1Q15270 411 aaPredicted RBP11.89□□□□□ -0.51
EFCAB13-203ENST00000517484 GOLIM4O00461 696 aa11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 SASH1O94885 1247 aa11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 WASHC4Q2M389 1173 aa11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 BMP2KLQ5H9B9 411 aa11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 NBPF5PQ86XG9 351 aaPredicted RBP11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 RTCBQ9Y3I0 505 aaKnown RBP11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 ROBO1Q9Y6N7 1651 aa11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 ITGA6P23229 1130 aa11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 KRT27Q7Z3Y8 459 aa11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 SUSD4Q5VX71 490 aa11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 HSCBQ8IWL3 235 aa11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 LINC00116Q8NCU8 138 aa11.88□□□□□ -0.51
EFCAB13-203ENST00000517484 TCEANC2Q96MN5 208 aa11.87□□□□□ -0.51
EFCAB13-203ENST00000517484 KDM4AO75164 1064 aa11.87□□□□□ -0.51
EFCAB13-203ENST00000517484 GIGYF2Q6Y7W6 1299 aaKnown RBP11.87□□□□□ -0.51
EFCAB13-203ENST00000517484 MAP3K15Q6ZN16 1313 aa11.87□□□□□ -0.51
EFCAB13-203ENST00000517484 CPA1P15085 419 aa11.87□□□□□ -0.51
EFCAB13-203ENST00000517484 FGD1P98174 961 aa11.87□□□□□ -0.51
EFCAB13-203ENST00000517484 NLRP10Q86W26 655 aa11.87□□□□□ -0.51
EFCAB13-203ENST00000517484 CCDC191Q8NCU4 936 aa11.87□□□□□ -0.51
EFCAB13-203ENST00000517484 SMARCC1Q92922 1105 aaPredicted RBP11.87□□□□□ -0.51
EFCAB13-203ENST00000517484 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
EFCAB13-203ENST00000517484 ECHDC1Q9NTX5 307 aa11.87□□□□□ -0.51
EFCAB13-203ENST00000517484 VPS37DQ86XT2 251 aa11.86□□□□□ -0.51
EFCAB13-203ENST00000517484 SETDB2Q96T68 719 aa11.86□□□□□ -0.51
EFCAB13-203ENST00000517484 ERC2O15083 957 aa11.86□□□□□ -0.51
EFCAB13-203ENST00000517484 APPP05067 770 aa11.86□□□□□ -0.51
EFCAB13-203ENST00000517484 PTPN12Q05209 780 aaKnown RBP11.86□□□□□ -0.51
EFCAB13-203ENST00000517484 SLC4A8Q2Y0W8 1093 aa11.86□□□□□ -0.51
EFCAB13-203ENST00000517484 CNTROBQ8N137 903 aa11.86□□□□□ -0.51
EFCAB13-203ENST00000517484 THRAP3Q9Y2W1 955 aaKnown RBP11.86□□□□□ -0.51
EFCAB13-203ENST00000517484 IDH1O75874 414 aaKnown RBP11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 NEK4P51957 841 aa11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 CCDC129Q6ZRS4 1044 aa11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 ABCF2Q9UG63 623 aa11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 ANKRD18BA2A2Z9 1011 aa11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 WTIPA6NIX2 430 aaPredicted RBP11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 ADORA1P30542 326 aa11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 FAM227BQ96M60 508 aa11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 UTP14AQ9BVJ6 771 aaKnown RBP11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 KIF1AQ12756 1690 aa11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 NCAPD2Q15021 1401 aa11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 RAB11FIP3O75154 756 aa11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 TTC39AQ5SRH9 613 aa11.85□□□□□ -0.51
EFCAB13-203ENST00000517484 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 INTS5Q6P9B9 1019 aaKnown RBP11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 AMIGO3Q86WK7 504 aa11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 SEC62Q99442 399 aaKnown RBP11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 ATP10DQ9P241 1426 aa11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 ERC1Q8IUD2 1116 aa11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 A0A1B0GUL7 405 aa11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 IFIT1P09914 478 aaKnown RBP11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 CHAF1AQ13111 956 aaPredicted RBP11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 ERFEQ4G0M1 354 aa11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 FNBP4Q8N3X1 1017 aaPredicted RBP11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 TOMM22Q9NS69 142 aa11.84□□□□□ -0.51
EFCAB13-203ENST00000517484 DBNLQ9UJU6 430 aaKnown RBP11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 SH3TC1Q8TE82 1336 aa11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 GLRX3O76003 335 aaKnown RBP11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 RXRBP28702 533 aa11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 IL6STP40189 918 aaPredicted RBP11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 TBC1D9BQ66K14 1250 aa11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 IBTKQ9P2D0 1353 aaPredicted RBP11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 REC8O95072 547 aa11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 TNNI3KQ59H18 835 aa11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 LRP10Q7Z4F1 713 aa11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 ANP32EQ9BTT0 268 aa11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 TBC1D2Q9BYX2 928 aa11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 ZNF652Q9Y2D9 606 aa11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 FPGT-TNNI3KV9GXZ4 949 aa11.83□□□□□ -0.52
EFCAB13-203ENST00000517484 FOSBP53539 338 aa11.82□□□□□ -0.52
EFCAB13-203ENST00000517484 SLC51AQ86UW1 340 aa11.82□□□□□ -0.52
EFCAB13-203ENST00000517484 TBC1D32Q96NH3 1257 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms