RNA–Protein interactions for RNA: ENST00000516881.1

SCARNA15-202, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-202ENST00000516881 TYRO3Q06418 890 aa3.36□□□□□ -1.87
SCARNA15-202ENST00000516881 FAM35AQ86V20 835 aa3.36□□□□□ -1.87
SCARNA15-202ENST00000516881 TPCN2Q8NHX9 752 aa3.36□□□□□ -1.87
SCARNA15-202ENST00000516881 CHMP7Q8WUX9 453 aaPredicted RBP3.36□□□□□ -1.87
SCARNA15-202ENST00000516881 NGLY1Q96IV0 654 aa3.36□□□□□ -1.87
SCARNA15-202ENST00000516881 TSPAN10Q9H1Z9 355 aaPredicted RBP3.36□□□□□ -1.87
SCARNA15-202ENST00000516881 DNAJB12Q9NXW2 375 aaKnown RBP3.36□□□□□ -1.87
SCARNA15-202ENST00000516881 GPC6Q9Y625 555 aaPredicted RBP3.36□□□□□ -1.87
SCARNA15-202ENST00000516881 NFKB1P19838 968 aa3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 NOS3P29474 1203 aa3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 SOX11P35716 441 aa3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 TXKP42681 527 aa3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 IRAK1P51617 712 aa3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 PSMA6P60900 246 aaKnown RBP3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 MLLT1Q03111 559 aaPredicted RBP3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 MSL1Q68DK7 614 aa3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 KRT25Q7Z3Z0 450 aa3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 C7orf43Q8WVR3 580 aa3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 NAGPAQ9UK23 515 aa3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 RBM19Q9Y4C8 960 aaKnown RBP3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.35□□□□□ -1.87
SCARNA15-202ENST00000516881 PPP1R12BO60237 982 aaPredicted RBP3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 PTCD1O75127 700 aaKnown RBP3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 EPHA4P54764 986 aa3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 BRPF1P55201 1214 aaPredicted RBP3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 KCNQ4P56696 695 aa3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 C1orf53Q5VUE5 145 aa3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 CCDC102BQ68D86 513 aa3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 ELMSAN1Q6PJG2 1045 aa3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 PRR23CQ6ZRP0 262 aa3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 BTLAQ7Z6A9 289 aa3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 WFDC8Q8IUA0 241 aa3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 BCANQ96GW7 911 aa3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 MEGF10Q96KG7 1140 aa3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 SSBP4Q9BWG4 385 aaPredicted RBP3.34□□□□□ -1.87
SCARNA15-202ENST00000516881 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 USP17L5A8MUK1 530 aa3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 LZTS3O60299 673 aaPredicted RBP3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 ALX3O95076 343 aa3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 YBX3P16989 372 aaKnown RBP eCLIP3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 FSTP19883 344 aa3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 CCINQ13939 588 aa3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 HFE2Q6ZVN8 426 aa3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 FBXO11Q86XK2 927 aa3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 TRIM50Q86XT4 487 aa3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 ALDH16A1Q8IZ83 802 aa3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 GSX2Q9BZM3 304 aa3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 KIAA1024Q9UPX6 916 aa3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 COL17A1Q9UMD9 1497 aaPredicted RBP3.33□□□□□ -1.88
SCARNA15-202ENST00000516881 TAL1P17542 331 aaPredicted RBP3.32□□□□□ -1.88
SCARNA15-202ENST00000516881 ATP1A2P50993 1020 aa3.32□□□□□ -1.88
SCARNA15-202ENST00000516881 PLAURQ03405 335 aa3.32□□□□□ -1.88
SCARNA15-202ENST00000516881 HIF1AQ16665 826 aa3.32□□□□□ -1.88
SCARNA15-202ENST00000516881 PERM1Q5SV97 790 aa3.32□□□□□ -1.88
SCARNA15-202ENST00000516881 IGF2-ASQ6U949 168 aa3.32□□□□□ -1.88
SCARNA15-202ENST00000516881 DTWD1Q8N5C7 304 aa3.32□□□□□ -1.88
SCARNA15-202ENST00000516881 TSEN2Q8NCE0 465 aaKnown RBP3.32□□□□□ -1.88
SCARNA15-202ENST00000516881 AKTIPQ9H8T0 292 aa3.32□□□□□ -1.88
SCARNA15-202ENST00000516881 RNF114Q9Y508 228 aa3.32□□□□□ -1.88
SCARNA15-202ENST00000516881 LGR5O75473 907 aa3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 GLB1P16278 677 aa3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 EIF2AK2P19525 551 aaKnown RBP3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 RASA1P20936 1047 aa3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 PCSK7Q16549 785 aa3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 GDF6Q6KF10 455 aaPredicted RBP3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 DHX32Q7L7V1 743 aaKnown RBP3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 WWC1Q8IX03 1113 aa3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 SCG3Q8WXD2 468 aaKnown RBP3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 ZNF594Q96JF6 807 aaPredicted RBP3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 LPIN3Q9BQK8 851 aa3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 SMG9Q9H0W8 520 aaKnown RBP3.31□□□□□ -1.88
SCARNA15-202ENST00000516881 ATAD2Q6PL18 1390 aa3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 ZBTB7BO15156 539 aaPredicted RBP3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 SASH3O75995 380 aa3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 RARAP10276 462 aa3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 EPB42P16452 691 aa3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 TARSP26639 723 aaKnown RBP3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 HIRAP54198 1017 aaPredicted RBP3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 GP2P55259 537 aaKnown RBP3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 CLDN10P78369 228 aa3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 AGGF1Q8N302 714 aaeCLIP3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 OGFOD1Q8N543 542 aa3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 GAS2L2Q8NHY3 880 aa3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 HINFPQ9BQA5 517 aa3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 EFCC1Q9HA90 598 aa3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 OAS3Q9Y6K5 1087 aaKnown RBP3.3□□□□□ -1.88
SCARNA15-202ENST00000516881 USP17L3A6NCW0 530 aa3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 USP17L4A6NCW7 530 aa3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 ZBTB42B2RXF5 422 aa3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 DEAF1O75398 565 aaPredicted RBP3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 TGFB1P01137 390 aa3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 CD97P48960 835 aa3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 GRIK5Q16478 980 aa3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 USP17L2Q6R6M4 530 aa3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 USP17L1Q7RTZ2 530 aa3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 IL22RA1Q8N6P7 574 aa3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 NFATC2IPQ8NCF5 419 aa3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 MRPL18Q9H0U6 180 aaKnown RBP3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 ALG2Q9H553 416 aa3.29□□□□□ -1.88
SCARNA15-202ENST00000516881 FRRS1LQ9P0K9 344 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms