RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 CLDN10P78369 228 aa5.05□□□□□ -1.6
RNU6-1338P-201ENST00000516328 LRP8Q14114 963 aa5.05□□□□□ -1.6
RNU6-1338P-201ENST00000516328 PLEKHM2Q8IWE5 1019 aa5.05□□□□□ -1.6
RNU6-1338P-201ENST00000516328 TP53INP1Q96A56 240 aa5.05□□□□□ -1.6
RNU6-1338P-201ENST00000516328 LENG1Q96BZ8 264 aaPredicted RBP5.05□□□□□ -1.6
RNU6-1338P-201ENST00000516328 USP17L3A6NCW0 530 aa5.04□□□□□ -1.6
RNU6-1338P-201ENST00000516328 USP17L4A6NCW7 530 aa5.04□□□□□ -1.6
RNU6-1338P-201ENST00000516328 HIF1AQ16665 826 aa5.04□□□□□ -1.6
RNU6-1338P-201ENST00000516328 PSAPL1Q6NUJ1 521 aa5.04□□□□□ -1.6
RNU6-1338P-201ENST00000516328 USP17L2Q6R6M4 530 aa5.04□□□□□ -1.6
RNU6-1338P-201ENST00000516328 USP17L1Q7RTZ2 530 aa5.04□□□□□ -1.6
RNU6-1338P-201ENST00000516328 BTLAQ7Z6A9 289 aa5.04□□□□□ -1.6
RNU6-1338P-201ENST00000516328 EFCC1Q9HA90 598 aa5.04□□□□□ -1.6
RNU6-1338P-201ENST00000516328 PPP1R12BO60237 982 aaPredicted RBP5.03□□□□□ -1.6
RNU6-1338P-201ENST00000516328 AFF1P51825 1210 aaKnown RBP5.03□□□□□ -1.6
RNU6-1338P-201ENST00000516328 DMRTC2Q8IXT2 367 aaPredicted RBP5.03□□□□□ -1.6
RNU6-1338P-201ENST00000516328 ALDH16A1Q8IZ83 802 aa5.03□□□□□ -1.6
RNU6-1338P-201ENST00000516328 FMR1NBQ8N0W7 255 aaPredicted RBP5.03□□□□□ -1.6
RNU6-1338P-201ENST00000516328 OGFOD1Q8N543 542 aa5.03□□□□□ -1.6
RNU6-1338P-201ENST00000516328 DNAJB12Q9NXW2 375 aaKnown RBP5.03□□□□□ -1.6
RNU6-1338P-201ENST00000516328 USP21Q9UK80 565 aa5.03□□□□□ -1.6
RNU6-1338P-201ENST00000516328 ATAD2Q6PL18 1390 aa5.03□□□□□ -1.6
RNU6-1338P-201ENST00000516328 PALM3A6NDB9 673 aaPredicted RBP5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 HYAL3O43820 417 aaPredicted RBP5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 RGS9O75916 674 aaPredicted RBP5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 LCE3BQ5TA77 95 aa5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 SIX5Q8N196 739 aa5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 LARGE2Q8N3Y3 721 aa5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 TSEN2Q8NCE0 465 aaKnown RBP5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 POM121Q96HA1 1249 aa5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 PNMA5Q96PV4 448 aa5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 KRTAP4-12Q9BQ66 201 aa5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 SSBP4Q9BWG4 385 aaPredicted RBP5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 GSX2Q9BZM3 304 aa5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 NAGPAQ9UK23 515 aa5.02□□□□□ -1.61
RNU6-1338P-201ENST00000516328 C21orf2O43822 256 aa5.01□□□□□ -1.61
RNU6-1338P-201ENST00000516328 TPRNQ4KMQ1 711 aa5.01□□□□□ -1.61
RNU6-1338P-201ENST00000516328 ILDR2Q71H61 639 aa5.01□□□□□ -1.61
RNU6-1338P-201ENST00000516328 STAG2Q8N3U4 1231 aa5.01□□□□□ -1.61
RNU6-1338P-201ENST00000516328 ADAMTS19Q8TE59 1207 aa5.01□□□□□ -1.61
RNU6-1338P-201ENST00000516328 NGLY1Q96IV0 654 aa5.01□□□□□ -1.61
RNU6-1338P-201ENST00000516328 C2orf49Q9BVC5 232 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1338P-201ENST00000516328 MKRN1Q9UHC7 482 aaKnown RBP5.01□□□□□ -1.61
RNU6-1338P-201ENST00000516328 RBM19Q9Y4C8 960 aaKnown RBP5.01□□□□□ -1.61
RNU6-1338P-201ENST00000516328 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1338P-201ENST00000516328 POM121CA8CG34 1229 aa5□□□□□ -1.61
RNU6-1338P-201ENST00000516328 ATP9BO43861 1147 aa5□□□□□ -1.61
RNU6-1338P-201ENST00000516328 SLC24A1O60721 1099 aa5□□□□□ -1.61
RNU6-1338P-201ENST00000516328 NFKB1P19838 968 aa5□□□□□ -1.61
RNU6-1338P-201ENST00000516328 CCINQ13939 588 aa5□□□□□ -1.61
RNU6-1338P-201ENST00000516328 MSL1Q68DK7 614 aa5□□□□□ -1.61
RNU6-1338P-201ENST00000516328 CHMP7Q8WUX9 453 aaPredicted RBP5□□□□□ -1.61
RNU6-1338P-201ENST00000516328 SCG3Q8WXD2 468 aaKnown RBP5□□□□□ -1.61
RNU6-1338P-201ENST00000516328 ZNF594Q96JF6 807 aaPredicted RBP5□□□□□ -1.61
RNU6-1338P-201ENST00000516328 UCN2Q96RP3 112 aa5□□□□□ -1.61
RNU6-1338P-201ENST00000516328 TGFBR3LH3BV60 316 aa4.99□□□□□ -1.61
RNU6-1338P-201ENST00000516328 RAD21O60216 631 aa4.99□□□□□ -1.61
RNU6-1338P-201ENST00000516328 DKK1O94907 266 aa4.99□□□□□ -1.61
RNU6-1338P-201ENST00000516328 CPB1P15086 417 aa4.99□□□□□ -1.61
RNU6-1338P-201ENST00000516328 IER5Q5VY09 327 aa4.99□□□□□ -1.61
RNU6-1338P-201ENST00000516328 FAM35AQ86V20 835 aa4.99□□□□□ -1.61
RNU6-1338P-201ENST00000516328 DTWD1Q8N5C7 304 aa4.99□□□□□ -1.61
RNU6-1338P-201ENST00000516328 GAS2L2Q8NHY3 880 aa4.99□□□□□ -1.61
RNU6-1338P-201ENST00000516328 WFDC12Q8WWY7 111 aa4.99□□□□□ -1.61
RNU6-1338P-201ENST00000516328 IREB2P48200 963 aaKnown RBP4.98□□□□□ -1.61
RNU6-1338P-201ENST00000516328 GRIK5Q16478 980 aa4.98□□□□□ -1.61
RNU6-1338P-201ENST00000516328 PCSK7Q16549 785 aa4.98□□□□□ -1.61
RNU6-1338P-201ENST00000516328 RTN1Q16799 776 aa4.98□□□□□ -1.61
RNU6-1338P-201ENST00000516328 HDGFL1Q5TGJ6 251 aa4.98□□□□□ -1.61
RNU6-1338P-201ENST00000516328 FBXO11Q86XK2 927 aa4.98□□□□□ -1.61
RNU6-1338P-201ENST00000516328 LPIN3Q9BQK8 851 aa4.98□□□□□ -1.61
RNU6-1338P-201ENST00000516328 FRRS1LQ9P0K9 344 aa4.98□□□□□ -1.61
RNU6-1338P-201ENST00000516328 DMGDHQ9UI17 866 aaKnown RBP4.98□□□□□ -1.61
RNU6-1338P-201ENST00000516328 RNF112Q9ULX5 631 aa4.98□□□□□ -1.61
RNU6-1338P-201ENST00000516328 EPB42P16452 691 aa4.97□□□□□ -1.61
RNU6-1338P-201ENST00000516328 NOS3P29474 1203 aa4.97□□□□□ -1.61
RNU6-1338P-201ENST00000516328 SEC13P55735 322 aa4.97□□□□□ -1.61
RNU6-1338P-201ENST00000516328 BCS1LQ9Y276 419 aa4.97□□□□□ -1.61
RNU6-1338P-201ENST00000516328 ZBTB42B2RXF5 422 aa4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 RASA1P20936 1047 aa4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 GRNP28799 593 aaKnown RBP4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 IDH3AP50213 366 aa4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 PLAURQ03405 335 aa4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 PERM1Q5SV97 790 aa4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 ELMSAN1Q6PJG2 1045 aa4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 IGF2-ASQ6U949 168 aa4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 DHX32Q7L7V1 743 aaKnown RBP4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 KRT25Q7Z3Z0 450 aa4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 WFDC8Q8IUA0 241 aa4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 MEGF10Q96KG7 1140 aa4.96□□□□□ -1.62
RNU6-1338P-201ENST00000516328 MAP3K6O95382 1288 aa4.95□□□□□ -1.62
RNU6-1338P-201ENST00000516328 UBTFP17480 764 aaKnown RBP4.95□□□□□ -1.62
RNU6-1338P-201ENST00000516328 PRR23CQ6ZRP0 262 aa4.95□□□□□ -1.62
RNU6-1338P-201ENST00000516328 TRPM4Q8TD43 1214 aa4.95□□□□□ -1.62
RNU6-1338P-201ENST00000516328 TTC9Q92623 222 aa4.95□□□□□ -1.62
RNU6-1338P-201ENST00000516328 HINFPQ9BQA5 517 aa4.95□□□□□ -1.62
RNU6-1338P-201ENST00000516328 ZFATQ9P243 1243 aa4.95□□□□□ -1.62
RNU6-1338P-201ENST00000516328 RARAP10276 462 aa4.94□□□□□ -1.62
RNU6-1338P-201ENST00000516328 TARSP26639 723 aaKnown RBP4.94□□□□□ -1.62
RNU6-1338P-201ENST00000516328 INPP5BP32019 993 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms