RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 IPO9Q96P70 1041 aaKnown RBP24.76■■□□□ 1.55
TRIO-223ENST00000515710 COPRSQ9NQ92 184 aa24.76■■□□□ 1.55
TRIO-223ENST00000515710 CDC45O75419 566 aa24.75■■□□□ 1.55
TRIO-223ENST00000515710 RFX5P48382 616 aaPredicted RBP24.74■■□□□ 1.55
TRIO-223ENST00000515710 CLASRPQ8N2M8 674 aaKnown RBP24.74■■□□□ 1.55
TRIO-223ENST00000515710 LMBR1LQ6UX01 489 aa24.74■■□□□ 1.55
TRIO-223ENST00000515710 ZBTB38Q8NAP3 1195 aaPredicted RBP24.74■■□□□ 1.55
TRIO-223ENST00000515710 TBC1D2BQ9UPU7 963 aa24.74■■□□□ 1.55
TRIO-223ENST00000515710 DDRGK1Q96HY6 314 aa24.73■■□□□ 1.55
TRIO-223ENST00000515710 SDSP20132 328 aa24.73■■□□□ 1.55
TRIO-223ENST00000515710 NLRP10Q86W26 655 aa24.73■■□□□ 1.55
TRIO-223ENST00000515710 PLA2G12BQ9BX93 195 aa24.72■■□□□ 1.55
TRIO-223ENST00000515710 PTPN12Q05209 780 aaKnown RBP24.71■■□□□ 1.55
TRIO-223ENST00000515710 FAM182BQ5T319 152 aa24.71■■□□□ 1.55
TRIO-223ENST00000515710 TBC1D9Q6ZT07 1266 aa24.71■■□□□ 1.55
TRIO-223ENST00000515710 PTF1AQ7RTS3 328 aa24.71■■□□□ 1.55
TRIO-223ENST00000515710 COL5A3P25940 1745 aaPredicted RBP24.71■■□□□ 1.55
TRIO-223ENST00000515710 SASH1O94885 1247 aa24.71■■□□□ 1.55
TRIO-223ENST00000515710 NUTM1Q86Y26 1132 aa24.71■■□□□ 1.55
TRIO-223ENST00000515710 CDHR2Q9BYE9 1310 aa24.7■■□□□ 1.55
TRIO-223ENST00000515710 CNTNAP4Q9C0A0 1308 aa24.7■■□□□ 1.55
TRIO-223ENST00000515710 MFAP1P55081 439 aaKnown RBP24.7■■□□□ 1.54
TRIO-223ENST00000515710 RTL5Q5HYW3 569 aaPredicted RBP24.7■■□□□ 1.54
TRIO-223ENST00000515710 RC3H1Q5TC82 1133 aaKnown RBP24.7■■□□□ 1.54
TRIO-223ENST00000515710 ZNF34Q8IZ26 560 aa24.7■■□□□ 1.54
TRIO-223ENST00000515710 LINC00116Q8NCU8 138 aa24.7■■□□□ 1.54
TRIO-223ENST00000515710 TBC1D32Q96NH3 1257 aa24.7■■□□□ 1.54
TRIO-223ENST00000515710 USP42Q9H9J4 1324 aaKnown RBP24.7■■□□□ 1.54
TRIO-223ENST00000515710 BTAF1O14981 1849 aa24.7■■□□□ 1.54
TRIO-223ENST00000515710 ANKRD36CQ5JPF3 1778 aa24.69■■□□□ 1.54
TRIO-223ENST00000515710 GPTP24298 496 aa24.69■■□□□ 1.54
TRIO-223ENST00000515710 CASC1Q6TDU7 716 aa24.69■■□□□ 1.54
TRIO-223ENST00000515710 TTC41PQ6P2S7 1318 aa24.68■■□□□ 1.54
TRIO-223ENST00000515710 CAMTA2O94983 1202 aa24.68■■□□□ 1.54
TRIO-223ENST00000515710 ZNF772Q68DY9 489 aaPredicted RBP24.68■■□□□ 1.54
TRIO-223ENST00000515710 KLHDC4Q8TBB5 520 aa24.68■■□□□ 1.54
TRIO-223ENST00000515710 SIL1Q9H173 461 aa24.68■■□□□ 1.54
TRIO-223ENST00000515710 FAM89AQ96GI7 184 aa24.67■■□□□ 1.54
TRIO-223ENST00000515710 BCL11BQ9C0K0 894 aaPredicted RBP24.67■■□□□ 1.54
TRIO-223ENST00000515710 NUP98P52948 1817 aa24.67■■□□□ 1.54
TRIO-223ENST00000515710 IFIT2P09913 472 aaKnown RBP24.67■■□□□ 1.54
TRIO-223ENST00000515710 CHMP3Q9Y3E7 222 aa24.67■■□□□ 1.54
TRIO-223ENST00000515710 MYH14Q7Z406 1995 aaKnown RBP24.66■■□□□ 1.54
TRIO-223ENST00000515710 GPATCH3Q96I76 525 aa24.66■■□□□ 1.54
TRIO-223ENST00000515710 RGL2O15211 777 aa24.65■■□□□ 1.54
TRIO-223ENST00000515710 TSHZ3Q63HK5 1081 aa24.65■■□□□ 1.54
TRIO-223ENST00000515710 C22orf23Q9BZE7 217 aa24.65■■□□□ 1.54
TRIO-223ENST00000515710 SBF2Q86WG5 1849 aa24.65■■□□□ 1.54
TRIO-223ENST00000515710 ERC2O15083 957 aa24.65■■□□□ 1.54
TRIO-223ENST00000515710 CSF1RP07333 972 aa24.65■■□□□ 1.54
TRIO-223ENST00000515710 FAM196AQ6ZSG2 479 aa24.65■■□□□ 1.54
TRIO-223ENST00000515710 PI4K2BQ8TCG2 481 aa24.65■■□□□ 1.54
TRIO-223ENST00000515710 TRMT112Q9UI30 125 aaKnown RBP24.65■■□□□ 1.54
TRIO-223ENST00000515710 CCNL1Q9UK58 526 aaPredicted RBP24.65■■□□□ 1.54
TRIO-223ENST00000515710 ZNF652Q9Y2D9 606 aa24.65■■□□□ 1.54
TRIO-223ENST00000515710 PARP10Q53GL7 1025 aa24.64■■□□□ 1.53
TRIO-223ENST00000515710 KRT27Q7Z3Y8 459 aa24.64■■□□□ 1.53
TRIO-223ENST00000515710 AACSQ86V21 672 aa24.64■■□□□ 1.53
TRIO-223ENST00000515710 GLRX3O76003 335 aaKnown RBP24.63■■□□□ 1.53
TRIO-223ENST00000515710 RBM6P78332 1123 aaKnown RBP24.63■■□□□ 1.53
TRIO-223ENST00000515710 CLEC4GQ6UXB4 293 aa24.63■■□□□ 1.53
TRIO-223ENST00000515710 ECHDC1Q9NTX5 307 aa24.63■■□□□ 1.53
TRIO-223ENST00000515710 UBN2Q6ZU65 1347 aa24.62■■□□□ 1.53
TRIO-223ENST00000515710 RPS6KA4O75676 772 aa24.62■■□□□ 1.53
TRIO-223ENST00000515710 CCDC57Q2TAC2 916 aa24.62■■□□□ 1.53
TRIO-223ENST00000515710 EAF2Q96CJ1 260 aaPredicted RBP24.62■■□□□ 1.53
TRIO-223ENST00000515710 AK7Q96M32 723 aa24.62■■□□□ 1.53
TRIO-223ENST00000515710 FBXO3Q9UK99 471 aa24.62■■□□□ 1.53
TRIO-223ENST00000515710 TRIM6-TRIM34B2RNG4 842 aa24.61■■□□□ 1.53
TRIO-223ENST00000515710 MSH5O43196 834 aa24.61■■□□□ 1.53
TRIO-223ENST00000515710 IRS4O14654 1257 aaPredicted RBP24.61■■□□□ 1.53
TRIO-223ENST00000515710 CIAO1O76071 339 aa24.61■■□□□ 1.53
TRIO-223ENST00000515710 IL15P40933 162 aaPredicted RBP24.61■■□□□ 1.53
TRIO-223ENST00000515710 KCNQ4P56696 695 aa24.61■■□□□ 1.53
TRIO-223ENST00000515710 LY75O60449 1722 aa24.6■■□□□ 1.53
TRIO-223ENST00000515710 PDE8AO60658 829 aa24.6■■□□□ 1.53
TRIO-223ENST00000515710 RILPL2Q969X0 211 aa24.6■■□□□ 1.53
TRIO-223ENST00000515710 TUBGCP6Q96RT7 1819 aa24.59■■□□□ 1.53
TRIO-223ENST00000515710 EYA2O00167 538 aa24.59■■□□□ 1.53
TRIO-223ENST00000515710 RBM25P49756 843 aaKnown RBP24.59■■□□□ 1.53
TRIO-223ENST00000515710 TFCP2Q12800 502 aa24.59■■□□□ 1.53
TRIO-223ENST00000515710 UTP14AQ9BVJ6 771 aaKnown RBP24.59■■□□□ 1.53
TRIO-223ENST00000515710 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.59■■□□□ 1.53
TRIO-223ENST00000515710 SUSD4Q5VX71 490 aa24.59■■□□□ 1.53
TRIO-223ENST00000515710 GPR108Q9NPR9 543 aa24.59■■□□□ 1.53
TRIO-223ENST00000515710 HSP90B1P14625 803 aaKnown RBP24.58■■□□□ 1.53
TRIO-223ENST00000515710 TNNI3KQ59H18 835 aa24.58■■□□□ 1.53
TRIO-223ENST00000515710 ATG9AQ7Z3C6 839 aa24.58■■□□□ 1.53
TRIO-223ENST00000515710 CNTROBQ8N137 903 aa24.58■■□□□ 1.53
TRIO-223ENST00000515710 CCDC8Q9H0W5 538 aaPredicted RBP24.58■■□□□ 1.53
TRIO-223ENST00000515710 FPGT-TNNI3KV9GXZ4 949 aa24.58■■□□□ 1.53
TRIO-223ENST00000515710 SH3TC1Q8TE82 1336 aa24.58■■□□□ 1.52
TRIO-223ENST00000515710 CTSWP56202 376 aa24.57■■□□□ 1.52
TRIO-223ENST00000515710 IFIT5Q13325 482 aaKnown RBP24.57■■□□□ 1.52
TRIO-223ENST00000515710 SYNE4Q8N205 404 aa24.57■■□□□ 1.52
TRIO-223ENST00000515710 TTLL11Q8NHH1 800 aa24.57■■□□□ 1.52
TRIO-223ENST00000515710 NIP7Q9Y221 180 aaKnown RBP eCLIP24.57■■□□□ 1.52
TRIO-223ENST00000515710 RTCBQ9Y3I0 505 aaKnown RBP24.56■■□□□ 1.52
TRIO-223ENST00000515710 BCORQ6W2J9 1755 aa24.56■■□□□ 1.52
TRIO-223ENST00000515710 TAF7LQ5H9L4 462 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms