RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 VPS72Q15906 364 aa18.88■□□□□ 0.61
THUMPD3-210ENST00000515662 ACSBG1Q96GR2 724 aa18.88■□□□□ 0.61
THUMPD3-210ENST00000515662 ECHDC1Q9NTX5 307 aa18.88■□□□□ 0.61
THUMPD3-210ENST00000515662 MAP3K15Q6ZN16 1313 aa18.88■□□□□ 0.61
THUMPD3-210ENST00000515662 LMBR1LQ6UX01 489 aa18.88■□□□□ 0.61
THUMPD3-210ENST00000515662 EAF2Q96CJ1 260 aaPredicted RBP18.88■□□□□ 0.61
THUMPD3-210ENST00000515662 KAT6BQ8WYB5 2073 aa18.88■□□□□ 0.61
THUMPD3-210ENST00000515662 HSCBQ8IWL3 235 aa18.87■□□□□ 0.61
THUMPD3-210ENST00000515662 GPATCH3Q96I76 525 aa18.87■□□□□ 0.61
THUMPD3-210ENST00000515662 MAP4K4O95819 1239 aaPredicted RBP18.86■□□□□ 0.61
THUMPD3-210ENST00000515662 ZBTB1Q9Y2K1 713 aa18.86■□□□□ 0.61
THUMPD3-210ENST00000515662 FAM98CQ17RN3 349 aaKnown RBP18.86■□□□□ 0.61
THUMPD3-210ENST00000515662 CNTROBQ8N137 903 aa18.85■□□□□ 0.61
THUMPD3-210ENST00000515662 FNBP4Q8N3X1 1017 aaPredicted RBP18.85■□□□□ 0.61
THUMPD3-210ENST00000515662 A0A0G2JS52 829 aa18.85■□□□□ 0.61
THUMPD3-210ENST00000515662 GIGYF2Q6Y7W6 1299 aaKnown RBP18.85■□□□□ 0.61
THUMPD3-210ENST00000515662 ARXQ96QS3 562 aa18.84■□□□□ 0.61
THUMPD3-210ENST00000515662 ANTXR1Q9H6X2 564 aa18.84■□□□□ 0.61
THUMPD3-210ENST00000515662 SPATA31A6Q5VVP1 1343 aa18.84■□□□□ 0.61
THUMPD3-210ENST00000515662 CCDC8Q9H0W5 538 aaPredicted RBP18.84■□□□□ 0.61
THUMPD3-210ENST00000515662 AK9Q5TCS8 1911 aa18.83■□□□□ 0.61
THUMPD3-210ENST00000515662 IL6STP40189 918 aaPredicted RBP18.83■□□□□ 0.61
THUMPD3-210ENST00000515662 HLFQ16534 295 aa18.83■□□□□ 0.61
THUMPD3-210ENST00000515662 SLKQ9H2G2 1235 aaPredicted RBP18.83■□□□□ 0.61
THUMPD3-210ENST00000515662 TLR7Q9NYK1 1049 aaKnown RBP18.83■□□□□ 0.6
THUMPD3-210ENST00000515662 CHMP3Q9Y3E7 222 aa18.83■□□□□ 0.6
THUMPD3-210ENST00000515662 PCCAP05165 728 aaPredicted RBP18.82■□□□□ 0.6
THUMPD3-210ENST00000515662 TFCP2Q12800 502 aa18.82■□□□□ 0.6
THUMPD3-210ENST00000515662 RABEP1Q15276 862 aa18.82■□□□□ 0.6
THUMPD3-210ENST00000515662 LOC102724428A0A0B4J2F2 783 aa18.82■□□□□ 0.6
THUMPD3-210ENST00000515662 SIK1P57059 783 aa18.82■□□□□ 0.6
THUMPD3-210ENST00000515662 CERKQ8TCT0 537 aa18.82■□□□□ 0.6
THUMPD3-210ENST00000515662 CD2BP2O95400 341 aaKnown RBP18.81■□□□□ 0.6
THUMPD3-210ENST00000515662 HSP90AB3PQ58FF7 597 aa18.81■□□□□ 0.6
THUMPD3-210ENST00000515662 INTS5Q6P9B9 1019 aaKnown RBP18.81■□□□□ 0.6
THUMPD3-210ENST00000515662 CICQ96RK0 1608 aaPredicted RBP18.81■□□□□ 0.6
THUMPD3-210ENST00000515662 ATP6V1AP38606 617 aa18.81■□□□□ 0.6
THUMPD3-210ENST00000515662 TNNI3KQ59H18 835 aa18.81■□□□□ 0.6
THUMPD3-210ENST00000515662 ZBTB38Q8NAP3 1195 aaPredicted RBP18.81■□□□□ 0.6
THUMPD3-210ENST00000515662 FPGT-TNNI3KV9GXZ4 949 aa18.81■□□□□ 0.6
THUMPD3-210ENST00000515662 PALLDQ8WX93 1383 aa18.8■□□□□ 0.6
THUMPD3-210ENST00000515662 ERVV-1B6SEH8 477 aa18.8■□□□□ 0.6
THUMPD3-210ENST00000515662 KCNQ2O43526 872 aa18.8■□□□□ 0.6
THUMPD3-210ENST00000515662 SPRYD3Q8NCJ5 442 aa18.8■□□□□ 0.6
THUMPD3-210ENST00000515662 IL25Q9H293 177 aa18.8■□□□□ 0.6
THUMPD3-210ENST00000515662 NLRP10Q86W26 655 aa18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 DZIP3Q86Y13 1208 aaKnown RBP18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 ANO2Q9NQ90 1003 aa18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 CCDC87Q9NVE4 849 aa18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 USP21Q9UK80 565 aa18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 EIF5P55010 431 aaKnown RBP18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 ITPK1Q13572 414 aa18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 ATG9AQ7Z3C6 839 aa18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 SMARCC1Q92922 1105 aaPredicted RBP18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 FAM89AQ96GI7 184 aa18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 PLA2G12BQ9BX93 195 aa18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 RREB1Q92766 1687 aa18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 ANKRD36CQ5JPF3 1778 aa18.79■□□□□ 0.6
THUMPD3-210ENST00000515662 GPTP24298 496 aa18.78■□□□□ 0.6
THUMPD3-210ENST00000515662 CRKLP46109 303 aaKnown RBP18.78■□□□□ 0.6
THUMPD3-210ENST00000515662 EVI5LQ96CN4 794 aa18.78■□□□□ 0.6
THUMPD3-210ENST00000515662 TBC1D2BQ9UPU7 963 aa18.78■□□□□ 0.6
THUMPD3-210ENST00000515662 SGSM2O43147 1006 aa18.78■□□□□ 0.6
THUMPD3-210ENST00000515662 DBNLQ9UJU6 430 aaKnown RBP18.78■□□□□ 0.6
THUMPD3-210ENST00000515662 EPB41L2O43491 1005 aaKnown RBP18.77■□□□□ 0.6
THUMPD3-210ENST00000515662 NFKBIBQ15653 356 aa18.77■□□□□ 0.6
THUMPD3-210ENST00000515662 CDHR2Q9BYE9 1310 aa18.77■□□□□ 0.6
THUMPD3-210ENST00000515662 K7ELQ4 463 aaPredicted RBP18.77■□□□□ 0.6
THUMPD3-210ENST00000515662 NUP98P52948 1817 aa18.76■□□□□ 0.59
THUMPD3-210ENST00000515662 EYA2O00167 538 aa18.76■□□□□ 0.59
THUMPD3-210ENST00000515662 IL15P40933 162 aaPredicted RBP18.76■□□□□ 0.59
THUMPD3-210ENST00000515662 ZNF594Q96JF6 807 aaPredicted RBP18.76■□□□□ 0.59
THUMPD3-210ENST00000515662 CIAO1O76071 339 aa18.76■□□□□ 0.59
THUMPD3-210ENST00000515662 CSF1RP07333 972 aa18.76■□□□□ 0.59
THUMPD3-210ENST00000515662 MCCP23508 829 aa18.76■□□□□ 0.59
THUMPD3-210ENST00000515662 BOLA2Q9H3K6 86 aa18.76■□□□□ 0.59
THUMPD3-210ENST00000515662 DIAPH3Q9NSV4 1193 aa18.76■□□□□ 0.59
THUMPD3-210ENST00000515662 THSD7AQ9UPZ6 1657 aa18.75■□□□□ 0.59
THUMPD3-210ENST00000515662 ATP5JP18859 108 aa18.75■□□□□ 0.59
THUMPD3-210ENST00000515662 CCDC57Q2TAC2 916 aa18.75■□□□□ 0.59
THUMPD3-210ENST00000515662 LRRC24Q50LG9 513 aa18.75■□□□□ 0.59
THUMPD3-210ENST00000515662 CWC27Q6UX04 472 aaKnown RBP18.75■□□□□ 0.59
THUMPD3-210ENST00000515662 ZNF34Q8IZ26 560 aa18.75■□□□□ 0.59
THUMPD3-210ENST00000515662 SYNE4Q8N205 404 aa18.75■□□□□ 0.59
THUMPD3-210ENST00000515662 GPR108Q9NPR9 543 aa18.75■□□□□ 0.59
THUMPD3-210ENST00000515662 DBNDD2Q9BQY9 259 aa18.74■□□□□ 0.59
THUMPD3-210ENST00000515662 ZNF831Q5JPB2 1677 aa18.74■□□□□ 0.59
THUMPD3-210ENST00000515662 ANAPC15P60006 121 aa18.74■□□□□ 0.59
THUMPD3-210ENST00000515662 RUFY2Q8WXA3 655 aa18.74■□□□□ 0.59
THUMPD3-210ENST00000515662 IL17RAQ96F46 866 aa18.74■□□□□ 0.59
THUMPD3-210ENST00000515662 PALD1Q9ULE6 856 aa18.74■□□□□ 0.59
THUMPD3-210ENST00000515662 UBN2Q6ZU65 1347 aa18.73■□□□□ 0.59
THUMPD3-210ENST00000515662 HSPA1LP34931 641 aa18.73■□□□□ 0.59
THUMPD3-210ENST00000515662 RAD50Q92878 1312 aa18.73■□□□□ 0.59
THUMPD3-210ENST00000515662 DDIT3P35638 169 aa18.73■□□□□ 0.59
THUMPD3-210ENST00000515662 PUS3Q9BZE2 481 aaKnown RBP18.73■□□□□ 0.59
THUMPD3-210ENST00000515662 LSG1Q9H089 658 aaKnown RBP18.73■□□□□ 0.59
THUMPD3-210ENST00000515662 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
THUMPD3-210ENST00000515662 CHMP5Q9NZZ3 219 aa18.72■□□□□ 0.59
THUMPD3-210ENST00000515662 FBXO3Q9UK99 471 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms