RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 USP50Q70EL3 339 aaPredicted RBP14.17□□□□□ -0.14
CLDND1-231ENST00000515620 GAS2L2Q8NHY3 880 aa14.17□□□□□ -0.14
CLDND1-231ENST00000515620 BTBD11A6QL63 1104 aa14.16□□□□□ -0.14
CLDND1-231ENST00000515620 GTF2E1P29083 439 aaPredicted RBP14.16□□□□□ -0.14
CLDND1-231ENST00000515620 LARGE2Q8N3Y3 721 aa14.16□□□□□ -0.14
CLDND1-231ENST00000515620 CEMIPQ8WUJ3 1361 aa14.16□□□□□ -0.14
CLDND1-231ENST00000515620 ABCC12Q96J65 1359 aa14.16□□□□□ -0.14
CLDND1-231ENST00000515620 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
CLDND1-231ENST00000515620 CELF2O95319 508 aaKnown RBP14.15□□□□□ -0.14
CLDND1-231ENST00000515620 KCNA4P22459 653 aa14.15□□□□□ -0.14
CLDND1-231ENST00000515620 BRPF1P55201 1214 aaPredicted RBP14.15□□□□□ -0.14
CLDND1-231ENST00000515620 SAPCD2Q86UD0 394 aa14.15□□□□□ -0.14
CLDND1-231ENST00000515620 PDE4DIPQ5VU43 2346 aa14.14□□□□□ -0.15
CLDND1-231ENST00000515620 HOXD11P31277 338 aaPredicted RBP14.14□□□□□ -0.15
CLDND1-231ENST00000515620 SLC51AQ86UW1 340 aa14.14□□□□□ -0.15
CLDND1-231ENST00000515620 CASP8AP2Q9UKL3 1982 aa14.14□□□□□ -0.15
CLDND1-231ENST00000515620 COL3A1P02461 1466 aaPredicted RBP14.13□□□□□ -0.15
CLDND1-231ENST00000515620 NBPF26B4DH59 902 aa14.13□□□□□ -0.15
CLDND1-231ENST00000515620 CRY2Q49AN0 593 aa14.13□□□□□ -0.15
CLDND1-231ENST00000515620 CC2D2BQ6DHV5 1058 aa14.13□□□□□ -0.15
CLDND1-231ENST00000515620 CIAPIN1Q6FI81 312 aa14.13□□□□□ -0.15
CLDND1-231ENST00000515620 NBPF10Q6P3W6 841 aaKnown RBP14.13□□□□□ -0.15
CLDND1-231ENST00000515620 NUTM1Q86Y26 1132 aa14.13□□□□□ -0.15
CLDND1-231ENST00000515620 NIM1KQ8IY84 436 aa14.13□□□□□ -0.15
CLDND1-231ENST00000515620 NBPF15Q8N660 670 aa14.13□□□□□ -0.15
CLDND1-231ENST00000515620 GLIS2Q9BZE0 524 aaPredicted RBP14.13□□□□□ -0.15
CLDND1-231ENST00000515620 ZNF408Q9H9D4 720 aa14.13□□□□□ -0.15
CLDND1-231ENST00000515620 TIMELESSQ9UNS1 1208 aa14.13□□□□□ -0.15
CLDND1-231ENST00000515620 TNRC18O15417 2968 aaPredicted RBP14.13□□□□□ -0.15
CLDND1-231ENST00000515620 RGL2O15211 777 aa14.12□□□□□ -0.15
CLDND1-231ENST00000515620 SNRPA1P09661 255 aaKnown RBP14.12□□□□□ -0.15
CLDND1-231ENST00000515620 HLFQ16534 295 aa14.12□□□□□ -0.15
CLDND1-231ENST00000515620 RPGRQ92834 1020 aaKnown RBP14.12□□□□□ -0.15
CLDND1-231ENST00000515620 ADARB2Q9NS39 739 aaKnown RBP14.12□□□□□ -0.15
CLDND1-231ENST00000515620 GPRC5DQ9NZD1 345 aa14.12□□□□□ -0.15
CLDND1-231ENST00000515620 TCERG1O14776 1098 aaKnown RBP14.11□□□□□ -0.15
CLDND1-231ENST00000515620 PPIP5K2O43314 1243 aa14.11□□□□□ -0.15
CLDND1-231ENST00000515620 SOX10P56693 466 aa14.11□□□□□ -0.15
CLDND1-231ENST00000515620 HHIPL1Q96JK4 782 aa14.11□□□□□ -0.15
CLDND1-231ENST00000515620 RIC1Q4ADV7 1423 aa14.1□□□□□ -0.15
CLDND1-231ENST00000515620 PPEF1O14829 653 aaPredicted RBP14.1□□□□□ -0.15
CLDND1-231ENST00000515620 AOC3Q16853 763 aa14.1□□□□□ -0.15
CLDND1-231ENST00000515620 CC2D1BQ5T0F9 858 aaKnown RBP14.1□□□□□ -0.15
CLDND1-231ENST00000515620 NYXQ9GZU5 481 aa14.1□□□□□ -0.15
CLDND1-231ENST00000515620 NPC1L1Q9UHC9 1359 aa14.09□□□□□ -0.15
CLDND1-231ENST00000515620 GMPSP49915 693 aaPredicted RBP14.09□□□□□ -0.15
CLDND1-231ENST00000515620 GRIPAP1Q4V328 841 aa14.09□□□□□ -0.15
CLDND1-231ENST00000515620 ZIC5Q96T25 663 aa14.09□□□□□ -0.15
CLDND1-231ENST00000515620 HOXA10P31260 410 aaPredicted RBP14.08□□□□□ -0.16
CLDND1-231ENST00000515620 NOGQ13253 232 aa14.08□□□□□ -0.16
CLDND1-231ENST00000515620 RBM17Q96I25 401 aaKnown RBP14.08□□□□□ -0.16
CLDND1-231ENST00000515620 PHACTR3Q96KR7 559 aa14.08□□□□□ -0.16
CLDND1-231ENST00000515620 NPM3O75607 178 aaKnown RBP14.07□□□□□ -0.16
CLDND1-231ENST00000515620 PRKAR2BP31323 418 aa14.07□□□□□ -0.16
CLDND1-231ENST00000515620 CXCL9Q07325 125 aa14.07□□□□□ -0.16
CLDND1-231ENST00000515620 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
CLDND1-231ENST00000515620 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
CLDND1-231ENST00000515620 GPTP24298 496 aa14.06□□□□□ -0.16
CLDND1-231ENST00000515620 HUNKP57058 714 aa14.06□□□□□ -0.16
CLDND1-231ENST00000515620 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
CLDND1-231ENST00000515620 MCM10Q7L590 875 aa14.06□□□□□ -0.16
CLDND1-231ENST00000515620 TRPM4Q8TD43 1214 aa14.06□□□□□ -0.16
CLDND1-231ENST00000515620 CRAMP1Q96RY5 1269 aa14.06□□□□□ -0.16
CLDND1-231ENST00000515620 ZNRF3Q9ULT6 936 aa14.06□□□□□ -0.16
CLDND1-231ENST00000515620 IBTKQ9P2D0 1353 aaPredicted RBP14.06□□□□□ -0.16
CLDND1-231ENST00000515620 LAMB4A4D0S4 1761 aa14.06□□□□□ -0.16
CLDND1-231ENST00000515620 PRPF38BQ5VTL8 546 aaKnown RBP14.05□□□□□ -0.16
CLDND1-231ENST00000515620 C3orf67Q6ZVT6 689 aa14.05□□□□□ -0.16
CLDND1-231ENST00000515620 RTF1Q92541 710 aaKnown RBP14.05□□□□□ -0.16
CLDND1-231ENST00000515620 BCL2L13Q9BXK5 485 aa14.05□□□□□ -0.16
CLDND1-231ENST00000515620 PGAP2Q9UHJ9 254 aa14.05□□□□□ -0.16
CLDND1-231ENST00000515620 UBN2Q6ZU65 1347 aa14.05□□□□□ -0.16
CLDND1-231ENST00000515620 CDHR2Q9BYE9 1310 aa14.05□□□□□ -0.16
CLDND1-231ENST00000515620 HIRAP54198 1017 aaPredicted RBP14.04□□□□□ -0.16
CLDND1-231ENST00000515620 KIF6Q6ZMV9 814 aa14.04□□□□□ -0.16
CLDND1-231ENST00000515620 CDC37L1Q7L3B6 337 aa14.04□□□□□ -0.16
CLDND1-231ENST00000515620 ZC3H15Q8WU90 426 aaKnown RBP14.04□□□□□ -0.16
CLDND1-231ENST00000515620 RSPH6AQ9H0K4 717 aa14.04□□□□□ -0.16
CLDND1-231ENST00000515620 TMX4Q9H1E5 349 aaPredicted RBP14.04□□□□□ -0.16
CLDND1-231ENST00000515620 MAP3K15Q6ZN16 1313 aa14.04□□□□□ -0.16
CLDND1-231ENST00000515620 SHTN1A0MZ66 631 aa14.03□□□□□ -0.16
CLDND1-231ENST00000515620 ERVV-1B6SEH8 477 aa14.03□□□□□ -0.16
CLDND1-231ENST00000515620 RAD17O75943 681 aa14.03□□□□□ -0.16
CLDND1-231ENST00000515620 DCTN1Q14203 1278 aa14.03□□□□□ -0.16
CLDND1-231ENST00000515620 SUSD4Q5VX71 490 aa14.03□□□□□ -0.16
CLDND1-231ENST00000515620 DLK2Q6UY11 383 aa14.03□□□□□ -0.16
CLDND1-231ENST00000515620 USP48Q86UV5 1035 aa14.03□□□□□ -0.16
CLDND1-231ENST00000515620 VPS33BQ9H267 617 aa14.03□□□□□ -0.16
CLDND1-231ENST00000515620 SAGE1Q9NXZ1 904 aa14.03□□□□□ -0.16
CLDND1-231ENST00000515620 ATP6V0A2Q9Y487 856 aa14.03□□□□□ -0.16
CLDND1-231ENST00000515620 NUP98P52948 1817 aa14.02□□□□□ -0.16
CLDND1-231ENST00000515620 NTSR2O95665 410 aa14.02□□□□□ -0.17
CLDND1-231ENST00000515620 TTLL7Q6ZT98 887 aa14.02□□□□□ -0.17
CLDND1-231ENST00000515620 SUPT20HQ8NEM7 779 aa14.02□□□□□ -0.17
CLDND1-231ENST00000515620 ZBTB3Q9H5J0 574 aa14.02□□□□□ -0.17
CLDND1-231ENST00000515620 FAM155AB1AL88 458 aaPredicted RBP14.01□□□□□ -0.17
CLDND1-231ENST00000515620 PER1O15534 1290 aaPredicted RBP14.01□□□□□ -0.17
CLDND1-231ENST00000515620 TRPA1O75762 1119 aa14.01□□□□□ -0.17
CLDND1-231ENST00000515620 TNIP1Q15025 636 aa14.01□□□□□ -0.17
CLDND1-231ENST00000515620 RGMBQ6NW40 437 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms