RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 GLIS2Q9BZE0 524 aaPredicted RBP16■□□□□ 0.15
CSF1R-208ENST00000515239 PGAP2Q9UHJ9 254 aa16■□□□□ 0.15
CSF1R-208ENST00000515239 RGL2O15211 777 aa15.99■□□□□ 0.15
CSF1R-208ENST00000515239 SOX10P56693 466 aa15.99■□□□□ 0.15
CSF1R-208ENST00000515239 ADARB2Q9NS39 739 aaKnown RBP15.99■□□□□ 0.15
CSF1R-208ENST00000515239 GPRC5DQ9NZD1 345 aa15.99■□□□□ 0.15
CSF1R-208ENST00000515239 KNSTRNQ9Y448 316 aa15.99■□□□□ 0.15
CSF1R-208ENST00000515239 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
CSF1R-208ENST00000515239 NBPF26B4DH59 902 aa15.98■□□□□ 0.15
CSF1R-208ENST00000515239 DIAPH1O60610 1272 aaKnown RBP15.98■□□□□ 0.15
CSF1R-208ENST00000515239 HLFQ16534 295 aa15.98■□□□□ 0.15
CSF1R-208ENST00000515239 PRPF38BQ5VTL8 546 aaKnown RBP15.98■□□□□ 0.15
CSF1R-208ENST00000515239 NBPF10Q6P3W6 841 aaKnown RBP15.98■□□□□ 0.15
CSF1R-208ENST00000515239 SLC51AQ86UW1 340 aa15.98■□□□□ 0.15
CSF1R-208ENST00000515239 NBPF15Q8N660 670 aa15.98■□□□□ 0.15
CSF1R-208ENST00000515239 BTBD11A6QL63 1104 aa15.97■□□□□ 0.15
CSF1R-208ENST00000515239 HOXA10P31260 410 aaPredicted RBP15.97■□□□□ 0.15
CSF1R-208ENST00000515239 NOGQ13253 232 aa15.97■□□□□ 0.15
CSF1R-208ENST00000515239 GRIPAP1Q4V328 841 aa15.97■□□□□ 0.15
CSF1R-208ENST00000515239 CEMIPQ8WUJ3 1361 aa15.97■□□□□ 0.15
CSF1R-208ENST00000515239 GTF2E1P29083 439 aaPredicted RBP15.96■□□□□ 0.15
CSF1R-208ENST00000515239 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.15
CSF1R-208ENST00000515239 HIRAP54198 1017 aaPredicted RBP15.95■□□□□ 0.14
CSF1R-208ENST00000515239 CXCL9Q07325 125 aa15.95■□□□□ 0.14
CSF1R-208ENST00000515239 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
CSF1R-208ENST00000515239 GAS2L2Q8NHY3 880 aa15.95■□□□□ 0.14
CSF1R-208ENST00000515239 SNRPA1P09661 255 aaKnown RBP15.94■□□□□ 0.14
CSF1R-208ENST00000515239 NUTM1Q86Y26 1132 aa15.94■□□□□ 0.14
CSF1R-208ENST00000515239 ZC3H15Q8WU90 426 aaKnown RBP15.94■□□□□ 0.14
CSF1R-208ENST00000515239 ZNF408Q9H9D4 720 aa15.94■□□□□ 0.14
CSF1R-208ENST00000515239 ABCC12Q96J65 1359 aa15.93■□□□□ 0.14
CSF1R-208ENST00000515239 NPC1L1Q9UHC9 1359 aa15.93■□□□□ 0.14
CSF1R-208ENST00000515239 FAM155AB1AL88 458 aaPredicted RBP15.93■□□□□ 0.14
CSF1R-208ENST00000515239 GMPSP49915 693 aaPredicted RBP15.93■□□□□ 0.14
CSF1R-208ENST00000515239 CDC37L1Q7L3B6 337 aa15.93■□□□□ 0.14
CSF1R-208ENST00000515239 CRAMP1Q96RY5 1269 aa15.93■□□□□ 0.14
CSF1R-208ENST00000515239 KIF7Q2M1P5 1343 aa15.93■□□□□ 0.14
CSF1R-208ENST00000515239 TCERG1O14776 1098 aaKnown RBP15.92■□□□□ 0.14
CSF1R-208ENST00000515239 PPIP5K2O43314 1243 aa15.92■□□□□ 0.14
CSF1R-208ENST00000515239 AOC3Q16853 763 aa15.92■□□□□ 0.14
CSF1R-208ENST00000515239 DLK2Q6UY11 383 aa15.92■□□□□ 0.14
CSF1R-208ENST00000515239 RPGRQ92834 1020 aaKnown RBP15.92■□□□□ 0.14
CSF1R-208ENST00000515239 VPS33BQ9H267 617 aa15.92■□□□□ 0.14
CSF1R-208ENST00000515239 ZNRF3Q9ULT6 936 aa15.92■□□□□ 0.14
CSF1R-208ENST00000515239 TIMELESSQ9UNS1 1208 aa15.92■□□□□ 0.14
CSF1R-208ENST00000515239 HSPA5P11021 654 aaKnown RBP15.91■□□□□ 0.14
CSF1R-208ENST00000515239 HUNKP57058 714 aa15.91■□□□□ 0.14
CSF1R-208ENST00000515239 PHACTR3Q96KR7 559 aa15.91■□□□□ 0.14
CSF1R-208ENST00000515239 NYXQ9GZU5 481 aa15.91■□□□□ 0.14
CSF1R-208ENST00000515239 RNF186Q9NXI6 227 aa15.91■□□□□ 0.14
CSF1R-208ENST00000515239 SAGE1Q9NXZ1 904 aa15.91■□□□□ 0.14
CSF1R-208ENST00000515239 EIF4G2P78344 907 aaKnown RBP eCLIP15.9■□□□□ 0.14
CSF1R-208ENST00000515239 USP48Q86UV5 1035 aa15.9■□□□□ 0.14
CSF1R-208ENST00000515239 TRPM4Q8TD43 1214 aa15.9■□□□□ 0.14
CSF1R-208ENST00000515239 PPEF1O14829 653 aaPredicted RBP15.89■□□□□ 0.13
CSF1R-208ENST00000515239 TRPA1O75762 1119 aa15.89■□□□□ 0.13
CSF1R-208ENST00000515239 KIF23Q02241 960 aaPredicted RBP15.89■□□□□ 0.13
CSF1R-208ENST00000515239 RBM17Q96I25 401 aaKnown RBP15.89■□□□□ 0.13
CSF1R-208ENST00000515239 RIC1Q4ADV7 1423 aa15.88■□□□□ 0.13
CSF1R-208ENST00000515239 U2SURPO15042 1029 aaKnown RBP15.88■□□□□ 0.13
CSF1R-208ENST00000515239 RGMBQ6NW40 437 aa15.88■□□□□ 0.13
CSF1R-208ENST00000515239 C3orf67Q6ZVT6 689 aa15.88■□□□□ 0.13
CSF1R-208ENST00000515239 RTFDC1Q9BY42 306 aaPredicted RBP15.88■□□□□ 0.13
CSF1R-208ENST00000515239 SHTN1A0MZ66 631 aa15.87■□□□□ 0.13
CSF1R-208ENST00000515239 ERVV-1B6SEH8 477 aa15.87■□□□□ 0.13
CSF1R-208ENST00000515239 CNOT7Q9UIV1 285 aaKnown RBP15.87■□□□□ 0.13
CSF1R-208ENST00000515239 ATP6V0A2Q9Y487 856 aa15.87■□□□□ 0.13
CSF1R-208ENST00000515239 CDHR2Q9BYE9 1310 aa15.87■□□□□ 0.13
CSF1R-208ENST00000515239 RAD17O75943 681 aa15.86■□□□□ 0.13
CSF1R-208ENST00000515239 SUSD4Q5VX71 490 aa15.86■□□□□ 0.13
CSF1R-208ENST00000515239 CTU1Q7Z7A3 348 aaKnown RBP15.86■□□□□ 0.13
CSF1R-208ENST00000515239 CCDC102AQ96A19 550 aa15.86■□□□□ 0.13
CSF1R-208ENST00000515239 CSRNP1Q96S65 589 aa15.86■□□□□ 0.13
CSF1R-208ENST00000515239 BCL2L13Q9BXK5 485 aa15.86■□□□□ 0.13
CSF1R-208ENST00000515239 UBN2Q6ZU65 1347 aa15.86■□□□□ 0.13
CSF1R-208ENST00000515239 PER1O15534 1290 aaPredicted RBP15.85■□□□□ 0.13
CSF1R-208ENST00000515239 TNIP1Q15025 636 aa15.85■□□□□ 0.13
CSF1R-208ENST00000515239 NGEFQ8N5V2 710 aa15.85■□□□□ 0.13
CSF1R-208ENST00000515239 GBA2Q9HCG7 927 aaPredicted RBP15.85■□□□□ 0.13
CSF1R-208ENST00000515239 HPS5Q9UPZ3 1129 aa15.85■□□□□ 0.13
CSF1R-208ENST00000515239 COL3A1P02461 1466 aaPredicted RBP15.84■□□□□ 0.13
CSF1R-208ENST00000515239 GPTP24298 496 aa15.84■□□□□ 0.13
CSF1R-208ENST00000515239 KIAA2012Q0VF49 1180 aa15.84■□□□□ 0.13
CSF1R-208ENST00000515239 TTLL7Q6ZT98 887 aa15.84■□□□□ 0.13
CSF1R-208ENST00000515239 MCM10Q7L590 875 aa15.84■□□□□ 0.13
CSF1R-208ENST00000515239 SUPT20HQ8NEM7 779 aa15.84■□□□□ 0.13
CSF1R-208ENST00000515239 MAP3K15Q6ZN16 1313 aa15.84■□□□□ 0.13
CSF1R-208ENST00000515239 IBTKQ9P2D0 1353 aaPredicted RBP15.84■□□□□ 0.13
CSF1R-208ENST00000515239 NUP98P52948 1817 aa15.83■□□□□ 0.12
CSF1R-208ENST00000515239 H7C1D1 291 aa15.83■□□□□ 0.12
CSF1R-208ENST00000515239 ZNF157P51786 506 aaPredicted RBP15.83■□□□□ 0.12
CSF1R-208ENST00000515239 CC2D1BQ5T0F9 858 aaKnown RBP15.83■□□□□ 0.12
CSF1R-208ENST00000515239 ZNF34Q8IZ26 560 aa15.83■□□□□ 0.12
CSF1R-208ENST00000515239 C2orf69Q8N8R5 385 aa15.83■□□□□ 0.12
CSF1R-208ENST00000515239 TMX4Q9H1E5 349 aaPredicted RBP15.83■□□□□ 0.12
CSF1R-208ENST00000515239 YDJCA8MPS7 323 aa15.82■□□□□ 0.12
CSF1R-208ENST00000515239 NTSR2O95665 410 aa15.82■□□□□ 0.12
CSF1R-208ENST00000515239 PRKAR2BP31323 418 aa15.82■□□□□ 0.12
CSF1R-208ENST00000515239 SAMD7Q7Z3H4 446 aa15.82■□□□□ 0.12
CSF1R-208ENST00000515239 KRT26Q7Z3Y9 468 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms