RNA–Protein interactions for RNA: ENST00000515006.5

COPB2-213, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-213ENST00000515006 NARFQ9UHQ1 456 aa7.39□□□□□ -1.23
COPB2-213ENST00000515006 SHANK3Q9BYB0 1731 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 SSFA2P28290 1259 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 RFC4P35249 363 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 G3BP1Q13283 466 aaKnown RBP eCLIP7.38□□□□□ -1.233e-7■■■□□ 14.8
COPB2-213ENST00000515006 POLA2Q14181 598 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 SIRT2Q8IXJ6 389 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 ZNF34Q8IZ26 560 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 PROM2Q8N271 834 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 LINC00116Q8NCU8 138 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 KIF1BPQ96EK5 621 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 PLA2G12BQ9BX93 195 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 LRRCC1Q9C099 1032 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 NYXQ9GZU5 481 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 RGS17Q9UGC6 210 aaPredicted RBP7.38□□□□□ -1.23
COPB2-213ENST00000515006 TRMT112Q9UI30 125 aaKnown RBP7.38□□□□□ -1.23
COPB2-213ENST00000515006 PDZRN3Q9UPQ7 1066 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 TBC1D2BQ9UPU7 963 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 PAPPAQ13219 1627 aa7.38□□□□□ -1.23
COPB2-213ENST00000515006 CACNA1FO60840 1977 aa7.37□□□□□ -1.23
COPB2-213ENST00000515006 CDHR2Q9BYE9 1310 aa7.37□□□□□ -1.23
COPB2-213ENST00000515006 WNK3Q9BYP7 1800 aa7.37□□□□□ -1.23
COPB2-213ENST00000515006 GNPATO15228 680 aa7.37□□□□□ -1.23
COPB2-213ENST00000515006 SURF6O75683 361 aaKnown RBP7.37□□□□□ -1.23
COPB2-213ENST00000515006 GTF2E1P29083 439 aaPredicted RBP7.37□□□□□ -1.23
COPB2-213ENST00000515006 OS9Q13438 667 aaPredicted RBP7.37□□□□□ -1.23
COPB2-213ENST00000515006 TXNRD1Q16881 649 aa7.37□□□□□ -1.23
COPB2-213ENST00000515006 RABL6Q3YEC7 729 aaPredicted RBP7.37□□□□□ -1.23
COPB2-213ENST00000515006 POTEAQ6S8J7 498 aa7.37□□□□□ -1.23
COPB2-213ENST00000515006 TPTE2Q6XPS3 522 aa7.37□□□□□ -1.23
COPB2-213ENST00000515006 UBE3BQ7Z3V4 1068 aa7.37□□□□□ -1.23
COPB2-213ENST00000515006 NLRP10Q86W26 655 aa7.37□□□□□ -1.23
COPB2-213ENST00000515006 SETDB2Q96T68 719 aa7.37□□□□□ -1.23
COPB2-213ENST00000515006 UTP14AQ9BVJ6 771 aaKnown RBP7.37□□□□□ -1.23
COPB2-213ENST00000515006 NOP58Q9Y2X3 529 aaKnown RBP7.37□□□□□ -1.23
COPB2-213ENST00000515006 UBR2Q8IWV8 1755 aa7.36□□□□□ -1.23
COPB2-213ENST00000515006 SH3TC1Q8TE82 1336 aa7.36□□□□□ -1.23
COPB2-213ENST00000515006 PDE8AO60658 829 aa7.36□□□□□ -1.23
COPB2-213ENST00000515006 CAMTA2O94983 1202 aa7.36□□□□□ -1.23
COPB2-213ENST00000515006 BAG6P46379 1132 aa7.36□□□□□ -1.23
COPB2-213ENST00000515006 HLFQ16534 295 aa7.36□□□□□ -1.23
COPB2-213ENST00000515006 CCDC57Q2TAC2 916 aa7.36□□□□□ -1.23
COPB2-213ENST00000515006 CLASRPQ8N2M8 674 aaKnown RBP7.36□□□□□ -1.23
COPB2-213ENST00000515006 SUCLG2Q96I99 432 aa7.36□□□□□ -1.23
COPB2-213ENST00000515006 BICC1Q9H694 974 aaKnown RBP7.36□□□□□ -1.23
COPB2-213ENST00000515006 COPRSQ9NQ92 184 aa7.36□□□□□ -1.23
COPB2-213ENST00000515006 NIP7Q9Y221 180 aaKnown RBP eCLIP7.36□□□□□ -1.23
COPB2-213ENST00000515006 TOGARAM1Q9Y4F4 1720 aa7.35□□□□□ -1.23
COPB2-213ENST00000515006 PNMA6EA0A0J9YXQ4 647 aa7.35□□□□□ -1.23
COPB2-213ENST00000515006 IRS4O14654 1257 aaPredicted RBP7.35□□□□□ -1.23
COPB2-213ENST00000515006 RGS3P49796 1198 aa7.35□□□□□ -1.23
COPB2-213ENST00000515006 CASP7P55210 303 aa7.35□□□□□ -1.23
COPB2-213ENST00000515006 IFIT5Q13325 482 aaKnown RBP7.35□□□□□ -1.23
COPB2-213ENST00000515006 TAF7LQ5H9L4 462 aa7.35□□□□□ -1.23
COPB2-213ENST00000515006 LMBR1LQ6UX01 489 aa7.35□□□□□ -1.23
COPB2-213ENST00000515006 PTF1AQ7RTS3 328 aa7.35□□□□□ -1.23
COPB2-213ENST00000515006 NLGN1Q8N2Q7 840 aa7.35□□□□□ -1.23
COPB2-213ENST00000515006 ARHGEF1Q92888 912 aaKnown RBP7.35□□□□□ -1.23
COPB2-213ENST00000515006 GPATCH3Q96I76 525 aa7.35□□□□□ -1.23
COPB2-213ENST00000515006 LNPKQ9C0E8 428 aa7.35□□□□□ -1.23
COPB2-213ENST00000515006 ZNF831Q5JPB2 1677 aa7.35□□□□□ -1.23
COPB2-213ENST00000515006 ANKRD18BA2A2Z9 1011 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 NPHP1O15259 732 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 CSF1RP07333 972 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 GPTP24298 496 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 IL15P40933 162 aaPredicted RBP7.34□□□□□ -1.23
COPB2-213ENST00000515006 FOXO4P98177 505 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 FAM161AQ3B820 660 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 CCDC152Q4G0S7 254 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 SLC10A5Q5PT55 438 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 PLCD3Q8N3E9 789 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 RHPN1Q8TCX5 695 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 FAM89AQ96GI7 184 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 LRRC4BQ9NT99 713 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 TFCP2L1Q9NZI6 479 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 CHMP3Q9Y3E7 222 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 DOT1LQ8TEK3 1739 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 NHSQ6T4R5 1651 aa7.34□□□□□ -1.23
COPB2-213ENST00000515006 LAMB4A4D0S4 1761 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.33□□□□□ -1.24
COPB2-213ENST00000515006 ERC2O15083 957 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 CIAO1O76071 339 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 IFIT2P09913 472 aaKnown RBP7.33□□□□□ -1.24
COPB2-213ENST00000515006 USPL1Q5W0Q7 1092 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 CASC1Q6TDU7 716 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 NBPF5PQ86XG9 351 aaPredicted RBP7.33□□□□□ -1.24
COPB2-213ENST00000515006 KAZALD1Q96I82 304 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 NLRP3Q96P20 1036 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 OSBPL3Q9H4L5 887 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 UPF2Q9HAU5 1272 aaKnown RBP7.33□□□□□ -1.24
COPB2-213ENST00000515006 GPR108Q9NPR9 543 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 CIZ1Q9ULV3 898 aaPredicted RBP7.33□□□□□ -1.24
COPB2-213ENST00000515006 EXOC6BQ9Y2D4 811 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 AKAP2Q9Y2D5 859 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 ITGB4P16144 1822 aa7.33□□□□□ -1.24
COPB2-213ENST00000515006 CICQ96RK0 1608 aaPredicted RBP7.33□□□□□ -1.24
COPB2-213ENST00000515006 AOX1Q06278 1338 aa7.32□□□□□ -1.24
COPB2-213ENST00000515006 USP42Q9H9J4 1324 aaKnown RBP7.32□□□□□ -1.24
COPB2-213ENST00000515006 CTSWP56202 376 aa7.32□□□□□ -1.24
COPB2-213ENST00000515006 KCNQ4P56696 695 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms