RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 PAPPAQ13219 1627 aa17.86■□□□□ 0.45
NUP54-217ENST00000514987 ATP5JP18859 108 aa17.86■□□□□ 0.45
NUP54-217ENST00000514987 RFX5P48382 616 aaPredicted RBP17.86■□□□□ 0.45
NUP54-217ENST00000514987 RNF20Q5VTR2 975 aa17.86■□□□□ 0.45
NUP54-217ENST00000514987 RASEFQ8IZ41 740 aa17.86■□□□□ 0.45
NUP54-217ENST00000514987 CCDC8Q9H0W5 538 aaPredicted RBP17.86■□□□□ 0.45
NUP54-217ENST00000514987 ZSWIM6Q9HCJ5 1215 aa17.86■□□□□ 0.45
NUP54-217ENST00000514987 RTN4Q9NQC3 1192 aaKnown RBP17.86■□□□□ 0.45
NUP54-217ENST00000514987 SLAIN2Q9P270 581 aa17.86■□□□□ 0.45
NUP54-217ENST00000514987 A0A087WZG4 1122 aa17.85■□□□□ 0.45
NUP54-217ENST00000514987 IL2RBP14784 551 aa17.85■□□□□ 0.45
NUP54-217ENST00000514987 NCLP19338 710 aaKnown RBP17.85■□□□□ 0.45
NUP54-217ENST00000514987 PSMA5P28066 241 aa17.85■□□□□ 0.45
NUP54-217ENST00000514987 AK2P54819 239 aa17.85■□□□□ 0.45
NUP54-217ENST00000514987 NECTIN1Q15223 517 aa17.85■□□□□ 0.45
NUP54-217ENST00000514987 EPHA10Q5JZY3 1008 aa17.85■□□□□ 0.45
NUP54-217ENST00000514987 GAS2L3Q86XJ1 694 aa17.85■□□□□ 0.45
NUP54-217ENST00000514987 ANP32BQ92688 251 aaKnown RBP17.85■□□□□ 0.45
NUP54-217ENST00000514987 MAP4K1Q92918 833 aa17.85■□□□□ 0.45
NUP54-217ENST00000514987 PANK2Q9BZ23 570 aa17.85■□□□□ 0.45
NUP54-217ENST00000514987 SIL1Q9H173 461 aa17.85■□□□□ 0.45
NUP54-217ENST00000514987 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
NUP54-217ENST00000514987 CASTP20810 708 aaKnown RBP17.84■□□□□ 0.45
NUP54-217ENST00000514987 PTPN12Q05209 780 aaKnown RBP17.84■□□□□ 0.45
NUP54-217ENST00000514987 NOL8Q76FK4 1167 aaKnown RBP17.84■□□□□ 0.45
NUP54-217ENST00000514987 UBE3BQ7Z3V4 1068 aa17.84■□□□□ 0.45
NUP54-217ENST00000514987 FSD1Q9BTV5 496 aa17.84■□□□□ 0.45
NUP54-217ENST00000514987 H7C1W4 665 aa17.83■□□□□ 0.45
NUP54-217ENST00000514987 HSPA2P54652 639 aa17.83■□□□□ 0.45
NUP54-217ENST00000514987 CASP7P55210 303 aa17.83■□□□□ 0.45
NUP54-217ENST00000514987 PTH1RQ03431 593 aa17.83■□□□□ 0.45
NUP54-217ENST00000514987 NMIQ13287 307 aaPredicted RBP17.83■□□□□ 0.45
NUP54-217ENST00000514987 ZSCAN23Q3MJ62 389 aa17.83■□□□□ 0.45
NUP54-217ENST00000514987 TNNI3KQ59H18 835 aa17.83■□□□□ 0.45
NUP54-217ENST00000514987 CAVIN1Q6NZI2 390 aaKnown RBP17.83■□□□□ 0.45
NUP54-217ENST00000514987 PDRG1Q9NUG6 133 aa17.83■□□□□ 0.45
NUP54-217ENST00000514987 FPGT-TNNI3KV9GXZ4 949 aa17.83■□□□□ 0.45
NUP54-217ENST00000514987 ABCA3Q99758 1704 aa17.83■□□□□ 0.44
NUP54-217ENST00000514987 KCNJ4P48050 445 aa17.83■□□□□ 0.44
NUP54-217ENST00000514987 PRPF40BQ6NWY9 871 aaKnown RBP17.83■□□□□ 0.44
NUP54-217ENST00000514987 RUFY3Q7L099 469 aa17.83■□□□□ 0.44
NUP54-217ENST00000514987 SYAP1Q96A49 352 aaPredicted RBP17.83■□□□□ 0.44
NUP54-217ENST00000514987 JAKMIP1Q96N16 626 aaKnown RBP17.83■□□□□ 0.44
NUP54-217ENST00000514987 CWC25Q9NXE8 425 aaPredicted RBP17.83■□□□□ 0.44
NUP54-217ENST00000514987 HMG20BQ9P0W2 317 aa17.83■□□□□ 0.44
NUP54-217ENST00000514987 ATP6V1DQ9Y5K8 247 aa17.83■□□□□ 0.44
NUP54-217ENST00000514987 RBM8AQ9Y5S9 174 aaKnown RBP17.83■□□□□ 0.44
NUP54-217ENST00000514987 NUP188Q5SRE5 1749 aa17.82■□□□□ 0.44
NUP54-217ENST00000514987 KCPQ6ZWJ8 1503 aa17.82■□□□□ 0.44
NUP54-217ENST00000514987 ANKRD1Q15327 319 aa17.82■□□□□ 0.44
NUP54-217ENST00000514987 ALDH8A1Q9H2A2 487 aaPredicted RBP17.82■□□□□ 0.44
NUP54-217ENST00000514987 BOLA2Q9H3K6 86 aa17.82■□□□□ 0.44
NUP54-217ENST00000514987 GPR108Q9NPR9 543 aa17.82■□□□□ 0.44
NUP54-217ENST00000514987 SMC3Q9UQE7 1217 aa17.82■□□□□ 0.44
NUP54-217ENST00000514987 JCADQ9P266 1359 aa17.81■□□□□ 0.44
NUP54-217ENST00000514987 MED23Q9ULK4 1368 aa17.81■□□□□ 0.44
NUP54-217ENST00000514987 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
NUP54-217ENST00000514987 TNS2Q63HR2 1409 aa17.81■□□□□ 0.44
NUP54-217ENST00000514987 CCDC173Q0VFZ6 552 aa17.81■□□□□ 0.44
NUP54-217ENST00000514987 CREB3L3Q68CJ9 461 aa17.81■□□□□ 0.44
NUP54-217ENST00000514987 CCDC191Q8NCU4 936 aa17.81■□□□□ 0.44
NUP54-217ENST00000514987 GPT2Q8TD30 523 aa17.81■□□□□ 0.44
NUP54-217ENST00000514987 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
NUP54-217ENST00000514987 NBPF26B4DH59 902 aa17.8■□□□□ 0.44
NUP54-217ENST00000514987 NASPP49321 788 aaPredicted RBP17.8■□□□□ 0.44
NUP54-217ENST00000514987 TFCP2Q12800 502 aa17.8■□□□□ 0.44
NUP54-217ENST00000514987 TSGA10IPQ3SY00 556 aa17.8■□□□□ 0.44
NUP54-217ENST00000514987 NBPF14Q5TI25 921 aa17.8■□□□□ 0.44
NUP54-217ENST00000514987 NBPF10Q6P3W6 841 aaKnown RBP17.8■□□□□ 0.44
NUP54-217ENST00000514987 NBPF15Q8N660 670 aa17.8■□□□□ 0.44
NUP54-217ENST00000514987 KLHDC4Q8TBB5 520 aa17.8■□□□□ 0.44
NUP54-217ENST00000514987 FAM227BQ96M60 508 aa17.8■□□□□ 0.44
NUP54-217ENST00000514987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.8■□□□□ 0.44
NUP54-217ENST00000514987 ATP5J2-PTCD1G3V325 749 aa17.79■□□□□ 0.44
NUP54-217ENST00000514987 PTCD1O75127 700 aaKnown RBP17.79■□□□□ 0.44
NUP54-217ENST00000514987 EVA1CP58658 441 aa17.79■□□□□ 0.44
NUP54-217ENST00000514987 KRT32Q14532 448 aa17.79■□□□□ 0.44
NUP54-217ENST00000514987 KLHL34Q8N239 644 aa17.79■□□□□ 0.44
NUP54-217ENST00000514987 TMEM87AQ8NBN3 555 aa17.79■□□□□ 0.44
NUP54-217ENST00000514987 TEX13AQ9BXU3 409 aaPredicted RBP17.79■□□□□ 0.44
NUP54-217ENST00000514987 ATG3Q9NT62 314 aa17.79■□□□□ 0.44
NUP54-217ENST00000514987 RPAP1Q9BWH6 1393 aaPredicted RBP17.79■□□□□ 0.44
NUP54-217ENST00000514987 ZSCAN22P10073 491 aaPredicted RBP17.79■□□□□ 0.44
NUP54-217ENST00000514987 FOXO4P98177 505 aa17.79■□□□□ 0.44
NUP54-217ENST00000514987 CSPP1Q1MSJ5 1256 aa17.79■□□□□ 0.44
NUP54-217ENST00000514987 LMBR1LQ6UX01 489 aa17.79■□□□□ 0.44
NUP54-217ENST00000514987 TRIM44Q96DX7 344 aaPredicted RBP17.79■□□□□ 0.44
NUP54-217ENST00000514987 PPP1R9BQ96SB3 815 aa17.79■□□□□ 0.44
NUP54-217ENST00000514987 DBNLQ9UJU6 430 aaKnown RBP17.79■□□□□ 0.44
NUP54-217ENST00000514987 SHANK3Q9BYB0 1731 aa17.78■□□□□ 0.44
NUP54-217ENST00000514987 SLC27A2O14975 620 aa17.78■□□□□ 0.44
NUP54-217ENST00000514987 STX6O43752 255 aa17.78■□□□□ 0.44
NUP54-217ENST00000514987 PHF14O94880 888 aa17.78■□□□□ 0.44
NUP54-217ENST00000514987 PIP4K2AP48426 406 aaPredicted RBP17.78■□□□□ 0.44
NUP54-217ENST00000514987 HAUS7Q99871 368 aa17.78■□□□□ 0.44
NUP54-217ENST00000514987 NHSL1Q5SYE7 1610 aa17.77■□□□□ 0.44
NUP54-217ENST00000514987 A0A0D9SFI3 127 aa17.77■□□□□ 0.44
NUP54-217ENST00000514987 IL15P40933 162 aaPredicted RBP17.77■□□□□ 0.44
NUP54-217ENST00000514987 FOXD4L5Q5VV16 416 aaPredicted RBP17.77■□□□□ 0.44
NUP54-217ENST00000514987 USPL1Q5W0Q7 1092 aa17.77■□□□□ 0.44
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