RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 RFX1P22670 979 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 NLRP5P59047 1200 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 ZNHIT6Q9NWK9 470 aaKnown RBP8.73□□□□□ -1.01
CCDC30-214ENST00000514642 IVNS1ABPQ9Y6Y0 642 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 NLRP1Q9C000 1473 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 COL17A1Q9UMD9 1497 aaPredicted RBP8.73□□□□□ -1.01
CCDC30-214ENST00000514642 LPXNO60711 386 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 EIF4A2Q14240 407 aaKnown RBP8.73□□□□□ -1.01
CCDC30-214ENST00000514642 STXBP4Q6ZWJ1 553 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 CFAP43Q8NDM7 1665 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 ATP2B3Q16720 1220 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 MSL1Q68DK7 614 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 SLC5A4Q9NY91 659 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 CKAP2LQ8IYA6 745 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 EFCAB6Q5THR3 1501 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 MAGEB6P1A0A0J9YX57 407 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 CCDC194A0A1B0GVG4 234 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 ALDH1L1O75891 902 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 C2CD5Q86YS7 1000 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 PLEKHG1Q9ULL1 1385 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 LIG1P18858 919 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 FERMT2Q96AC1 680 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 ZCCHC11Q5TAX3 1644 aaKnown RBP8.72□□□□□ -1.01
CCDC30-214ENST00000514642 CDR1P51861 262 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 HSP90AA2PQ14568 343 aaPredicted RBP8.72□□□□□ -1.01
CCDC30-214ENST00000514642 APBB1IPQ7Z5R6 666 aaPredicted RBP8.72□□□□□ -1.01
CCDC30-214ENST00000514642 IPO9Q96P70 1041 aaKnown RBP8.72□□□□□ -1.01
CCDC30-214ENST00000514642 PI4KAP2A4QPH2 592 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 GOLGA8AA7E2F4 631 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 GOLGA8BA8MQT2 603 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 PI4KAP1Q8N8J0 262 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 DDX17Q92841 729 aaKnown RBP8.72□□□□□ -1.01
CCDC30-214ENST00000514642 EVI5LQ96CN4 794 aa8.72□□□□□ -1.01
CCDC30-214ENST00000514642 KIF20AO95235 890 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 SLC4A8Q2Y0W8 1093 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 SEPT11Q9NVA2 429 aaKnown RBP8.71□□□□□ -1.01
CCDC30-214ENST00000514642 DENND2AQ9ULE3 1009 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 NOD1Q9Y239 953 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 TCOF1Q13428 1488 aaKnown RBP8.71□□□□□ -1.01
CCDC30-214ENST00000514642 SBNO1A3KN83 1393 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 IL16Q14005 1332 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 F6X3S4 739 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 TRIM37O94972 964 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 KSR2Q6VAB6 950 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 CDCA7LQ96GN5 454 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 KRT23Q9C075 422 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 GOLIM4O00461 696 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 PPIP5K2O43314 1243 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 PDIA4P13667 645 aaKnown RBP8.71□□□□□ -1.01
CCDC30-214ENST00000514642 VAT1LQ9HCJ6 419 aa8.71□□□□□ -1.01
CCDC30-214ENST00000514642 ZFYP08048 801 aaPredicted RBP8.71□□□□□ -1.02
CCDC30-214ENST00000514642 IL15P40933 162 aaPredicted RBP8.71□□□□□ -1.02
CCDC30-214ENST00000514642 UNC5CLQ8IV45 518 aa8.71□□□□□ -1.02
CCDC30-214ENST00000514642 TMEM57Q8N5G2 664 aa8.71□□□□□ -1.02
CCDC30-214ENST00000514642 GPHNQ9NQX3 736 aaPredicted RBP8.71□□□□□ -1.02
CCDC30-214ENST00000514642 SLC4A4Q9Y6R1 1079 aa8.71□□□□□ -1.02
CCDC30-214ENST00000514642 HECW2Q9P2P5 1572 aa8.71□□□□□ -1.02
CCDC30-214ENST00000514642 GPS2Q13227 327 aa8.71□□□□□ -1.02
CCDC30-214ENST00000514642 EXOC6BQ9Y2D4 811 aa8.71□□□□□ -1.02
CCDC30-214ENST00000514642 CERS3Q8IU89 383 aa8.71□□□□□ -1.02
CCDC30-214ENST00000514642 CNKSR1Q969H4 720 aa8.71□□□□□ -1.02
CCDC30-214ENST00000514642 FANCIQ9NVI1 1328 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 ECM2O94769 699 aaPredicted RBP8.7□□□□□ -1.02
CCDC30-214ENST00000514642 GNAT2P19087 354 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 HOMER1Q86YM7 354 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 CSADQ9Y600 493 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 EDC4Q6P2E9 1401 aaKnown RBP8.7□□□□□ -1.02
CCDC30-214ENST00000514642 ASXL1Q8IXJ9 1541 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 CEBPZQ03701 1054 aaKnown RBP8.7□□□□□ -1.02
CCDC30-214ENST00000514642 NLGN1Q8N2Q7 840 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 ABCA8O94911 1581 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 ARHGEF10LQ9HCE6 1279 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 MBIPQ9NS73 344 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 MPNDQ8N594 471 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 SMARCC2Q8TAQ2 1214 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 TARBP1Q13395 1621 aaKnown RBP8.7□□□□□ -1.02
CCDC30-214ENST00000514642 AS3MTQ9HBK9 375 aa8.7□□□□□ -1.02
CCDC30-214ENST00000514642 ERVV-2B6SEH9 535 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 ME1P48163 572 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 SLFN5Q08AF3 891 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 TTC6Q86TZ1 520 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 ERMNQ8TAM6 284 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 CAGE1Q8TC20 777 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 CNNM2Q9H8M5 875 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 SOS1Q07889 1333 aaPredicted RBP8.69□□□□□ -1.02
CCDC30-214ENST00000514642 TNFAIP1Q13829 316 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 TMEM67Q5HYA8 995 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 DNMT1P26358 1616 aaKnown RBP8.69□□□□□ -1.02
CCDC30-214ENST00000514642 BICD1Q96G01 975 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 DEF6Q9H4E7 631 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 GNAQP50148 359 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 BRPF1P55201 1214 aaPredicted RBP8.69□□□□□ -1.02
CCDC30-214ENST00000514642 PABPC4Q13310 644 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCDC30-214ENST00000514642 PLCD3Q8N3E9 789 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 TNPO1Q92973 898 aaKnown RBP8.69□□□□□ -1.02
CCDC30-214ENST00000514642 CALML4Q96GE6 196 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 LRRC27Q9C0I9 530 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 THRAP3Q9Y2W1 955 aaKnown RBP8.69□□□□□ -1.02
CCDC30-214ENST00000514642 FGFR1OPO95684 399 aaKnown RBP8.69□□□□□ -1.02
CCDC30-214ENST00000514642 MTHFSDQ2M296 383 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms