RNA–Protein interactions for RNA: ENST00000514515.5

NREP-222, Transcript of neuronal regeneration related protein, human

TSL 1 (best)

Gene NREP, Length 3,564 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NREP-222	ENST00000514515	LEO1	Q8WVC0	666 aa	Predicted RBP	7.46	□□□□□ -1.22
NREP-222	ENST00000514515	ANKRD7	Q92527	254 aa		7.46	□□□□□ -1.22
NREP-222	ENST00000514515	NPHP3	Q7Z494	1330 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515		A0A087WWV3	80 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	SKIL	P12757	684 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	NMI	Q13287	307 aa	Predicted RBP	7.45	□□□□□ -1.22
NREP-222	ENST00000514515	ARID5B	Q14865	1188 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	IL17RE	Q8NFR9	667 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	FMNL2	Q96PY5	1086 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	USP16	Q9Y5T5	823 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	CCDC171	Q6TFL3	1326 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	TEF	Q10587	303 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	ANKRD1	Q15327	319 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	EVI5L	Q96CN4	794 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	SLC26A8	Q96RN1	970 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	MAP2	P11137	1827 aa	Known RBP	7.45	□□□□□ -1.22
NREP-222	ENST00000514515	ADAMTSL3	P82987	1691 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	CPS1	P31327	1500 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	CTIF	O43310	598 aa	Known RBP	7.45	□□□□□ -1.22
NREP-222	ENST00000514515	JAK2	O60674	1132 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	CCDC73	Q6ZRK6	1079 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	SYTL4	Q96C24	671 aa	Predicted RBP	7.45	□□□□□ -1.22
NREP-222	ENST00000514515	LRRC2	Q9BYS8	371 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	FRMPD1	Q5SYB0	1578 aa		7.45	□□□□□ -1.22
NREP-222	ENST00000514515	ALK	Q9UM73	1620 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	CCDC144B	Q3MJ40	725 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	GORAB	Q5T7V8	394 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	CCDC144CP	Q8IYA2	1237 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	ERCC4	Q92889	916 aa	Predicted RBP	7.44	□□□□□ -1.22
NREP-222	ENST00000514515	SDF4	Q9BRK5	362 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	CLSTN2	Q9H4D0	955 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	ZNF215	Q9UL58	517 aa	Predicted RBP	7.44	□□□□□ -1.22
NREP-222	ENST00000514515	CDC42BPG	Q6DT37	1551 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	PIK3C2B	O00750	1634 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	TTC41P	Q6P2S7	1318 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	SLC27A2	O14975	620 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	KIN	O60870	393 aa	Known RBP	7.44	□□□□□ -1.22
NREP-222	ENST00000514515	BRF1	Q92994	677 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	CTNNA3	Q9UI47	895 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	HECW2	Q9P2P5	1572 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	ME1	P48163	572 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	GUCY1B3	Q02153	619 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	BBX	Q8WY36	941 aa	Predicted RBP	7.44	□□□□□ -1.22
NREP-222	ENST00000514515	TM6SF1	Q9BZW5	370 aa		7.44	□□□□□ -1.22
NREP-222	ENST00000514515	CCDC69	A6NI79	296 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	COL9A3	Q14050	684 aa	Predicted RBP	7.43	□□□□□ -1.22
NREP-222	ENST00000514515	POLA2	Q14181	598 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	NECTIN1	Q15223	517 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	CWF19L2	Q2TBE0	894 aa	Known RBP	7.43	□□□□□ -1.22
NREP-222	ENST00000514515	HOMER1	Q86YM7	354 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	ERC1	Q8IUD2	1116 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	KRT222	Q8N1A0	295 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	KIF18A	Q8NI77	898 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	CFAP45	Q9UL16	551 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	USP27X	A6NNY8	438 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	HIP1	O00291	1037 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	SMC2	O95347	1197 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	ST3GAL1	Q11201	340 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	SF3A1	Q15459	793 aa	Known RBP	7.43	□□□□□ -1.22
NREP-222	ENST00000514515	ELF2	Q15723	593 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	CCAR1	Q8IX12	1150 aa	Known RBP	7.43	□□□□□ -1.22
NREP-222	ENST00000514515	TRERF1	Q96PN7	1200 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	MAP3K2	Q9Y2U5	619 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	NRDC	O43847	1150 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	LRRC8A	Q8IWT6	810 aa		7.43	□□□□□ -1.22
NREP-222	ENST00000514515	EDC3	Q96F86	508 aa	Known RBP	7.43	□□□□□ -1.22
NREP-222	ENST00000514515	DNAJC2	Q99543	621 aa	Known RBP	7.43	□□□□□ -1.22
NREP-222	ENST00000514515		A0A0D9SFI3	127 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	KCNQ3	O43525	872 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	RPS6KB1	P23443	525 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	BEND3	Q5T5X7	828 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	7.42	□□□□□ -1.22
NREP-222	ENST00000514515	PLA2G4D	Q86XP0	818 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	ABTB2	Q8N961	1025 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	ZNF397	Q8NF99	534 aa	Predicted RBP	7.42	□□□□□ -1.22
NREP-222	ENST00000514515	TDRD7	Q8NHU6	1098 aa	Known RBP	7.42	□□□□□ -1.22
NREP-222	ENST00000514515	PGBD1	Q96JS3	809 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	TAF6L	Q9Y6J9	622 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	BTBD11	A6QL63	1104 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	PDIA4	P13667	645 aa	Known RBP	7.42	□□□□□ -1.22
NREP-222	ENST00000514515	C11orf57	Q6ZUT1	292 aa	Predicted RBP	7.42	□□□□□ -1.22
NREP-222	ENST00000514515	KLHDC4	Q8TBB5	520 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	FTO	Q9C0B1	505 aa	Known RBP eCLIP	7.42	□□□□□ -1.22
NREP-222	ENST00000514515	LGR6	Q9HBX8	967 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	DDX41	Q9UJV9	622 aa	Known RBP	7.42	□□□□□ -1.22
NREP-222	ENST00000514515	NDUFB9	Q9Y6M9	179 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	FLT4	P35916	1363 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	ELP1	O95163	1332 aa		7.42	□□□□□ -1.22
NREP-222	ENST00000514515	TCHH	Q07283	1943 aa		7.41	□□□□□ -1.22
NREP-222	ENST00000514515	CCDC66	A2RUB6	948 aa		7.41	□□□□□ -1.22
NREP-222	ENST00000514515	CCT2	P78371	535 aa	Known RBP	7.41	□□□□□ -1.22
NREP-222	ENST00000514515	STX1A	Q16623	288 aa		7.41	□□□□□ -1.22
NREP-222	ENST00000514515	MPRIP	Q6WCQ1	1025 aa		7.41	□□□□□ -1.22
NREP-222	ENST00000514515	AOPEP	Q8N6M6	819 aa		7.41	□□□□□ -1.22
NREP-222	ENST00000514515	MAP4K1	Q92918	833 aa		7.41	□□□□□ -1.22
NREP-222	ENST00000514515	IL17RA	Q96F46	866 aa		7.41	□□□□□ -1.22
NREP-222	ENST00000514515	HDAC5	Q9UQL6	1122 aa		7.41	□□□□□ -1.22
NREP-222	ENST00000514515	ZBTB22	O15209	634 aa		7.41	□□□□□ -1.22
NREP-222	ENST00000514515	GABPB1	Q06547	395 aa	Predicted RBP	7.41	□□□□□ -1.22
NREP-222	ENST00000514515	TAF3	Q5VWG9	929 aa		7.41	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms