RNA–Protein interactions for RNA: ENST00000514478.1

COPG1-209, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-209ENST00000514478 A0A087WZG4 1122 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 GRIN3BO60391 1043 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 NUCB1Q02818 461 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 TCIRG1Q13488 830 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 INTS5Q6P9B9 1019 aaKnown RBP11.04□□□□□ -0.64
COPG1-209ENST00000514478 PPP1R42Q7Z4L9 355 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 CHD1LQ86WJ1 897 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 KLHL34Q8N239 644 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 LINC00116Q8NCU8 138 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 JARID2Q92833 1246 aaPredicted RBP11.04□□□□□ -0.64
COPG1-209ENST00000514478 SUCLG2Q96I99 432 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 DCTPP1Q9H773 170 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 TBC1D2BQ9UPU7 963 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 SCN7AQ01118 1682 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 C4AP0C0L4 1744 aa11.04□□□□□ -0.64
COPG1-209ENST00000514478 SPEF2Q9C093 1822 aa11.03□□□□□ -0.64
COPG1-209ENST00000514478 PNMA6EA0A0J9YXQ4 647 aa11.03□□□□□ -0.64
COPG1-209ENST00000514478 SRGAP3O43295 1099 aa11.03□□□□□ -0.64
COPG1-209ENST00000514478 KCNQ4P56696 695 aa11.03□□□□□ -0.64
COPG1-209ENST00000514478 OS9Q13438 667 aaPredicted RBP11.03□□□□□ -0.64
COPG1-209ENST00000514478 UBE3BQ7Z3V4 1068 aa11.03□□□□□ -0.64
COPG1-209ENST00000514478 CCDC191Q8NCU4 936 aa11.03□□□□□ -0.64
COPG1-209ENST00000514478 ANO8Q9HCE9 1232 aaPredicted RBP11.03□□□□□ -0.64
COPG1-209ENST00000514478 UTYO14607 1347 aa11.03□□□□□ -0.64
COPG1-209ENST00000514478 LAMB2P55268 1798 aa11.03□□□□□ -0.64
COPG1-209ENST00000514478 COL15A1P39059 1388 aa11.03□□□□□ -0.64
COPG1-209ENST00000514478 IBTKQ9P2D0 1353 aaPredicted RBP11.03□□□□□ -0.64
COPG1-209ENST00000514478 UBR3Q6ZT12 1888 aa11.02□□□□□ -0.64
COPG1-209ENST00000514478 GPTP24298 496 aa11.02□□□□□ -0.65
COPG1-209ENST00000514478 EIF5P55010 431 aaKnown RBP11.02□□□□□ -0.65
COPG1-209ENST00000514478 HLFQ16534 295 aa11.02□□□□□ -0.65
COPG1-209ENST00000514478 RTL5Q5HYW3 569 aaPredicted RBP11.02□□□□□ -0.65
COPG1-209ENST00000514478 SLC27A3Q5K4L6 730 aa11.02□□□□□ -0.65
COPG1-209ENST00000514478 IFFO2Q5TF58 517 aa11.02□□□□□ -0.65
COPG1-209ENST00000514478 GIGYF2Q6Y7W6 1299 aaKnown RBP11.02□□□□□ -0.65
COPG1-209ENST00000514478 BICC1Q9H694 974 aaKnown RBP11.02□□□□□ -0.65
COPG1-209ENST00000514478 EXOC6BQ9Y2D4 811 aa11.02□□□□□ -0.65
COPG1-209ENST00000514478 CNTNAP4Q9C0A0 1308 aa11.02□□□□□ -0.65
COPG1-209ENST00000514478 ERVV-1B6SEH8 477 aa11.01□□□□□ -0.65
COPG1-209ENST00000514478 SURF6O75683 361 aaKnown RBP11.01□□□□□ -0.65
COPG1-209ENST00000514478 PDE4AP27815 886 aa11.01□□□□□ -0.65
COPG1-209ENST00000514478 PTGER2P43116 358 aa11.01□□□□□ -0.65
COPG1-209ENST00000514478 SSH3Q8TE77 659 aa11.01□□□□□ -0.65
COPG1-209ENST00000514478 ISCA1Q9BUE6 129 aa11.01□□□□□ -0.65
COPG1-209ENST00000514478 TSHZ2Q9NRE2 1034 aa11.01□□□□□ -0.65
COPG1-209ENST00000514478 CHMP3Q9Y3E7 222 aa11.01□□□□□ -0.65
COPG1-209ENST00000514478 SMARCA5O60264 1052 aaPredicted RBP11□□□□□ -0.65
COPG1-209ENST00000514478 POLA2Q14181 598 aa11□□□□□ -0.65
COPG1-209ENST00000514478 HSP90AB4PQ58FF6 505 aa11□□□□□ -0.65
COPG1-209ENST00000514478 AK7Q96M32 723 aa11□□□□□ -0.65
COPG1-209ENST00000514478 ZNF652Q9Y2D9 606 aa11□□□□□ -0.65
COPG1-209ENST00000514478 DDX60Q8IY21 1712 aaKnown RBP11□□□□□ -0.65
COPG1-209ENST00000514478 H7C1W4 665 aa10.99□□□□□ -0.65
COPG1-209ENST00000514478 GNPATO15228 680 aa10.99□□□□□ -0.65
COPG1-209ENST00000514478 RAB11FIP3O75154 756 aa10.99□□□□□ -0.65
COPG1-209ENST00000514478 RC3H1Q5TC82 1133 aaKnown RBP10.99□□□□□ -0.65
COPG1-209ENST00000514478 LRRCC1Q9C099 1032 aa10.99□□□□□ -0.65
COPG1-209ENST00000514478 TFCP2L1Q9NZI6 479 aa10.99□□□□□ -0.65
COPG1-209ENST00000514478 RTCBQ9Y3I0 505 aaKnown RBP10.99□□□□□ -0.65
COPG1-209ENST00000514478 TUBGCP6Q96RT7 1819 aa10.99□□□□□ -0.65
COPG1-209ENST00000514478 FAM177BA6PVY3 158 aa10.98□□□□□ -0.65
COPG1-209ENST00000514478 RPS6KA4O75676 772 aa10.98□□□□□ -0.65
COPG1-209ENST00000514478 PCCAP05165 728 aaPredicted RBP10.98□□□□□ -0.65
COPG1-209ENST00000514478 TRIM28Q13263 835 aaKnown RBP10.98□□□□□ -0.65
COPG1-209ENST00000514478 G3BP1Q13283 466 aaKnown RBP eCLIP10.98□□□□□ -0.658e-11■■■□□ 16.2
COPG1-209ENST00000514478 MTX1Q13505 466 aa10.98□□□□□ -0.65
COPG1-209ENST00000514478 FAM161AQ3B820 660 aa10.98□□□□□ -0.65
COPG1-209ENST00000514478 EPHA10Q5JZY3 1008 aa10.98□□□□□ -0.65
COPG1-209ENST00000514478 NLRP10Q86W26 655 aa10.98□□□□□ -0.65
COPG1-209ENST00000514478 TRMT112Q9UI30 125 aaKnown RBP10.98□□□□□ -0.65
COPG1-209ENST00000514478 COL24A1Q17RW2 1714 aa10.98□□□□□ -0.65
COPG1-209ENST00000514478 MSH5O43196 834 aa10.97□□□□□ -0.65
COPG1-209ENST00000514478 ZPR1O75312 459 aa10.97□□□□□ -0.65
COPG1-209ENST00000514478 CAMTA2O94983 1202 aa10.97□□□□□ -0.65
COPG1-209ENST00000514478 CASP7P55210 303 aa10.97□□□□□ -0.65
COPG1-209ENST00000514478 LMBR1LQ6UX01 489 aa10.97□□□□□ -0.65
COPG1-209ENST00000514478 ERC1Q8IUD2 1116 aa10.97□□□□□ -0.65
COPG1-209ENST00000514478 ZBTB38Q8NAP3 1195 aaPredicted RBP10.97□□□□□ -0.65
COPG1-209ENST00000514478 KIF1BPQ96EK5 621 aa10.97□□□□□ -0.65
COPG1-209ENST00000514478 KAZALD1Q96I82 304 aa10.97□□□□□ -0.65
COPG1-209ENST00000514478 PA2G4Q9UQ80 394 aaKnown RBP10.97□□□□□ -0.65
COPG1-209ENST00000514478 CDHR2Q9BYE9 1310 aa10.96□□□□□ -0.65
COPG1-209ENST00000514478 PHF14O94880 888 aa10.96□□□□□ -0.65
COPG1-209ENST00000514478 PARP10Q53GL7 1025 aa10.96□□□□□ -0.65
COPG1-209ENST00000514478 ZNF34Q8IZ26 560 aa10.96□□□□□ -0.65
COPG1-209ENST00000514478 PROM2Q8N271 834 aa10.96□□□□□ -0.65
COPG1-209ENST00000514478 FAM89AQ96GI7 184 aa10.96□□□□□ -0.65
COPG1-209ENST00000514478 SIL1Q9H173 461 aa10.96□□□□□ -0.65
COPG1-209ENST00000514478 NIP7Q9Y221 180 aaKnown RBP eCLIP10.96□□□□□ -0.65
COPG1-209ENST00000514478 RFC4P35249 363 aa10.95□□□□□ -0.66
COPG1-209ENST00000514478 FOXO4P98177 505 aa10.95□□□□□ -0.66
COPG1-209ENST00000514478 TAF7LQ5H9L4 462 aa10.95□□□□□ -0.66
COPG1-209ENST00000514478 TRAPPC3LQ5T215 181 aa10.95□□□□□ -0.66
COPG1-209ENST00000514478 USPL1Q5W0Q7 1092 aa10.95□□□□□ -0.66
COPG1-209ENST00000514478 SMIM5Q71RC9 77 aa10.95□□□□□ -0.66
COPG1-209ENST00000514478 C16orf71Q8IYS4 520 aaPredicted RBP10.95□□□□□ -0.66
COPG1-209ENST00000514478 FLAD1Q8NFF5 587 aa10.95□□□□□ -0.66
COPG1-209ENST00000514478 RHPN1Q8TCX5 695 aa10.95□□□□□ -0.66
COPG1-209ENST00000514478 UTP14AQ9BVJ6 771 aaKnown RBP10.95□□□□□ -0.66
COPG1-209ENST00000514478 BACH2Q9BYV9 841 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms