RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 LMOD1P29536 600 aaPredicted RBP9□□□□□ -0.97
CLCN3-209ENST00000513761 PIP4K2AP48426 406 aaPredicted RBP9□□□□□ -0.97
CLCN3-209ENST00000513761 MTHFSDQ2M296 383 aaKnown RBP9□□□□□ -0.97
CLCN3-209ENST00000513761 SYT10Q6XYQ8 523 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 GTF3C6Q969F1 213 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 DEF6Q9H4E7 631 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 NPHP3Q7Z494 1330 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 KIAA0754O94854 1291 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 CREB3L3Q68CJ9 461 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 FEZ1Q99689 392 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 ORC3Q9UBD5 711 aaPredicted RBP9□□□□□ -0.97
CLCN3-209ENST00000513761 USP16Q9Y5T5 823 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 BCORL1Q5H9F3 1711 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 PLCH2O75038 1416 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 ZMYM3Q14202 1370 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 UBASH3AP57075 661 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 CCDC12Q8WUD4 166 aaPredicted RBP9□□□□□ -0.97
CLCN3-209ENST00000513761 PALD1Q9ULE6 856 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 ACEP12821 1306 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 NCKAP5LQ9HCH0 1330 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 KIAA1328Q86T90 577 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 AMOTL1Q8IY63 956 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 HMG20BQ9P0W2 317 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 SNX14Q9Y5W7 946 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 PTPRTO14522 1441 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 CRACR2AQ9BSW2 395 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 RAI14Q9P0K7 980 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 DISP1Q96F81 1524 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 TTC21BQ7Z4L5 1316 aa9□□□□□ -0.97
CLCN3-209ENST00000513761 SNRKQ9NRH2 765 aa8.99□□□□□ -0.97
CLCN3-209ENST00000513761 PNMA6EA0A0J9YXQ4 647 aa8.99□□□□□ -0.97
CLCN3-209ENST00000513761 EPS15P42566 896 aa8.99□□□□□ -0.97
CLCN3-209ENST00000513761 RUFY3Q7L099 469 aa8.99□□□□□ -0.97
CLCN3-209ENST00000513761 SOS1Q07889 1333 aaPredicted RBP8.99□□□□□ -0.97
CLCN3-209ENST00000513761 CDR1P51861 262 aa8.99□□□□□ -0.97
CLCN3-209ENST00000513761 TDO2P48775 406 aa8.99□□□□□ -0.97
CLCN3-209ENST00000513761 MCM6Q14566 821 aa8.99□□□□□ -0.97
CLCN3-209ENST00000513761 MRPS27Q92552 414 aaKnown RBP8.99□□□□□ -0.97
CLCN3-209ENST00000513761 CBX8Q9HC52 389 aa8.99□□□□□ -0.97
CLCN3-209ENST00000513761 RNF216Q9NWF9 866 aaPredicted RBP8.99□□□□□ -0.97
CLCN3-209ENST00000513761 ATP5J2-PTCD1G3V325 749 aa8.99□□□□□ -0.97
CLCN3-209ENST00000513761 PTCD1O75127 700 aaKnown RBP8.99□□□□□ -0.97
CLCN3-209ENST00000513761 MARCKSP29966 332 aaPredicted RBP8.99□□□□□ -0.97
CLCN3-209ENST00000513761 CHST3Q7LGC8 479 aa8.99□□□□□ -0.97
CLCN3-209ENST00000513761 GBP3Q9H0R5 595 aa8.99□□□□□ -0.97
CLCN3-209ENST00000513761 ADAMTS12P58397 1594 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 LIG1P18858 919 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 PHAXQ9H814 394 aaKnown RBP8.98□□□□□ -0.97
CLCN3-209ENST00000513761 IFNKQ9P0W0 207 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 A0A087WZG4 1122 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 EIF5P55010 431 aaKnown RBP8.98□□□□□ -0.97
CLCN3-209ENST00000513761 ZC3H6P61129 1189 aaKnown RBP8.98□□□□□ -0.97
CLCN3-209ENST00000513761 KIF6Q6ZMV9 814 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 CCDC148Q8NFR7 591 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 PPIP5K1Q6PFW1 1433 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 ABCC2Q92887 1545 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 IBSPP21815 317 aaPredicted RBP8.98□□□□□ -0.97
CLCN3-209ENST00000513761 HSP90AB3PQ58FF7 597 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 NACAP1Q9BZK3 213 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 CD109Q6YHK3 1445 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 ZNF213O14771 459 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 UBE3BQ7Z3V4 1068 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 UBAC1Q9BSL1 405 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 SYKP43405 635 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 STIM1Q13586 685 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 ARFGAP3Q9NP61 516 aa8.98□□□□□ -0.97
CLCN3-209ENST00000513761 ELF2Q15723 593 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 ZSCAN25Q6NSZ9 544 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 AIDAQ96BJ3 306 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 HYPKQ9NX55 129 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 DENND4BO75064 1496 aaPredicted RBP8.97□□□□□ -0.97
CLCN3-209ENST00000513761 LRMPQ12912 555 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 MICU3Q86XE3 530 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 PUS7Q96PZ0 661 aaKnown RBP8.97□□□□□ -0.97
CLCN3-209ENST00000513761 TANGO6Q9C0B7 1094 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 NSFL1CQ9UNZ2 370 aaKnown RBP8.97□□□□□ -0.97
CLCN3-209ENST00000513761 RIMS2Q9UQ26 1411 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 KIF20AO95235 890 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 IL13P35225 146 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 ZNF75DP51815 510 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 NCBP3Q53F19 620 aaKnown RBP8.97□□□□□ -0.97
CLCN3-209ENST00000513761 NUP88Q99567 741 aaPredicted RBP8.97□□□□□ -0.97
CLCN3-209ENST00000513761 WDR7Q9Y4E6 1490 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 RBM33Q96EV2 1170 aaKnown RBP8.97□□□□□ -0.97
CLCN3-209ENST00000513761 ABCC4O15439 1325 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 MBD5Q9P267 1494 aa8.97□□□□□ -0.97
CLCN3-209ENST00000513761 SGSM2O43147 1006 aa8.96□□□□□ -0.97
CLCN3-209ENST00000513761 APOBRQ0VD83 1088 aa8.96□□□□□ -0.97
CLCN3-209ENST00000513761 CWF19L2Q2TBE0 894 aaKnown RBP8.96□□□□□ -0.97
CLCN3-209ENST00000513761 CDC37L1Q7L3B6 337 aa8.96□□□□□ -0.97
CLCN3-209ENST00000513761 WASF1Q92558 559 aa8.96□□□□□ -0.97
CLCN3-209ENST00000513761 KLF18A0A0U1RQI7 1052 aa8.96□□□□□ -0.97
CLCN3-209ENST00000513761 GOLGA6L10A6NI86 522 aa8.96□□□□□ -0.97
CLCN3-209ENST00000513761 CCDC102BQ68D86 513 aa8.96□□□□□ -0.97
CLCN3-209ENST00000513761 RTL1A6NKG5 1358 aa8.96□□□□□ -0.98
CLCN3-209ENST00000513761 METTL24Q5JXM2 366 aa8.96□□□□□ -0.98
CLCN3-209ENST00000513761 TXLNBQ8N3L3 684 aa8.96□□□□□ -0.98
CLCN3-209ENST00000513761 CDK5RAP3Q96JB5 506 aa8.96□□□□□ -0.98
CLCN3-209ENST00000513761 A0A1B0GVL5 298 aa8.96□□□□□ -0.98
CLCN3-209ENST00000513761 G3V3G9 751 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms