RNA–Protein interactions for RNA: ENST00000513719.1

SNCAIP-218, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,303 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-218ENST00000513719 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.17
SNCAIP-218ENST00000513719 TTC41PQ6P2S7 1318 aa16.08■□□□□ 0.17
SNCAIP-218ENST00000513719 NWD2Q9ULI1 1742 aa16.08■□□□□ 0.17
SNCAIP-218ENST00000513719 BCL9LQ86UU0 1499 aa16.08■□□□□ 0.16
SNCAIP-218ENST00000513719 HLFQ16534 295 aa16.08■□□□□ 0.16
SNCAIP-218ENST00000513719 C8orf37Q96NL8 207 aa16.07■□□□□ 0.16
SNCAIP-218ENST00000513719 ECHDC1Q9NTX5 307 aa16.07■□□□□ 0.16
SNCAIP-218ENST00000513719 REC8O95072 547 aa16.07■□□□□ 0.16
SNCAIP-218ENST00000513719 IFIT2P09913 472 aaKnown RBP16.07■□□□□ 0.16
SNCAIP-218ENST00000513719 NFKBIBQ15653 356 aa16.06■□□□□ 0.16
SNCAIP-218ENST00000513719 MAP3K15Q6ZN16 1313 aa16.06■□□□□ 0.16
SNCAIP-218ENST00000513719 EIF5BO60841 1220 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-218ENST00000513719 GLRX3O76003 335 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-218ENST00000513719 FAM98CQ17RN3 349 aaKnown RBP16.06■□□□□ 0.16
SNCAIP-218ENST00000513719 KCNQ2O43526 872 aa16.05■□□□□ 0.16
SNCAIP-218ENST00000513719 TFCP2Q12800 502 aa16.05■□□□□ 0.16
SNCAIP-218ENST00000513719 TRIM28Q13263 835 aaKnown RBP16.05■□□□□ 0.16
SNCAIP-218ENST00000513719 HSCBQ8IWL3 235 aa16.05■□□□□ 0.16
SNCAIP-218ENST00000513719 NGLY1Q96IV0 654 aa16.05■□□□□ 0.16
SNCAIP-218ENST00000513719 JCADQ9P266 1359 aa16.05■□□□□ 0.16
SNCAIP-218ENST00000513719 ARXQ96QS3 562 aa16.05■□□□□ 0.16
SNCAIP-218ENST00000513719 A0A0G2JS52 829 aa16.04■□□□□ 0.16
SNCAIP-218ENST00000513719 GIGYF2Q6Y7W6 1299 aaKnown RBP16.04■□□□□ 0.16
SNCAIP-218ENST00000513719 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
SNCAIP-218ENST00000513719 SYNE4Q8N205 404 aa16.04■□□□□ 0.16
SNCAIP-218ENST00000513719 INTS5Q6P9B9 1019 aaKnown RBP16.03■□□□□ 0.16
SNCAIP-218ENST00000513719 ATG9AQ7Z3C6 839 aa16.03■□□□□ 0.16
SNCAIP-218ENST00000513719 CNTROBQ8N137 903 aa16.03■□□□□ 0.16
SNCAIP-218ENST00000513719 VPS72Q15906 364 aa16.03■□□□□ 0.16
SNCAIP-218ENST00000513719 FNBP4Q8N3X1 1017 aaPredicted RBP16.03■□□□□ 0.16
SNCAIP-218ENST00000513719 FAM89AQ96GI7 184 aa16.03■□□□□ 0.16
SNCAIP-218ENST00000513719 CHMP3Q9Y3E7 222 aa16.03■□□□□ 0.16
SNCAIP-218ENST00000513719 ITPK1Q13572 414 aa16.02■□□□□ 0.16
SNCAIP-218ENST00000513719 ZNF594Q96JF6 807 aaPredicted RBP16.02■□□□□ 0.16
SNCAIP-218ENST00000513719 DBNLQ9UJU6 430 aaKnown RBP16.02■□□□□ 0.16
SNCAIP-218ENST00000513719 PALD1Q9ULE6 856 aa16.02■□□□□ 0.16
SNCAIP-218ENST00000513719 GPTP24298 496 aa16.02■□□□□ 0.15
SNCAIP-218ENST00000513719 DDIT3P35638 169 aa16.02■□□□□ 0.15
SNCAIP-218ENST00000513719 RABEP1Q15276 862 aa16.02■□□□□ 0.15
SNCAIP-218ENST00000513719 TNNI3KQ59H18 835 aa16.02■□□□□ 0.15
SNCAIP-218ENST00000513719 ANO2Q9NQ90 1003 aa16.02■□□□□ 0.15
SNCAIP-218ENST00000513719 TBC1D2BQ9UPU7 963 aa16.02■□□□□ 0.15
SNCAIP-218ENST00000513719 FPGT-TNNI3KV9GXZ4 949 aa16.02■□□□□ 0.15
SNCAIP-218ENST00000513719 SGSM2O43147 1006 aa16.01■□□□□ 0.15
SNCAIP-218ENST00000513719 IL6STP40189 918 aaPredicted RBP16.01■□□□□ 0.15
SNCAIP-218ENST00000513719 NLRP10Q86W26 655 aa16.01■□□□□ 0.15
SNCAIP-218ENST00000513719 LOC102724428A0A0B4J2F2 783 aa16.01■□□□□ 0.15
SNCAIP-218ENST00000513719 FRAT2O75474 233 aaPredicted RBP16.01■□□□□ 0.15
SNCAIP-218ENST00000513719 PCCAP05165 728 aaPredicted RBP16.01■□□□□ 0.15
SNCAIP-218ENST00000513719 ATP6V1AP38606 617 aa16.01■□□□□ 0.15
SNCAIP-218ENST00000513719 SIK1P57059 783 aa16.01■□□□□ 0.15
SNCAIP-218ENST00000513719 BOLA2Q9H3K6 86 aa16.01■□□□□ 0.15
SNCAIP-218ENST00000513719 EIF5P55010 431 aaKnown RBP16■□□□□ 0.15
SNCAIP-218ENST00000513719 LRRC24Q50LG9 513 aa16■□□□□ 0.15
SNCAIP-218ENST00000513719 PTF1AQ7RTS3 328 aa16■□□□□ 0.15
SNCAIP-218ENST00000513719 GPATCH3Q96I76 525 aa16■□□□□ 0.15
SNCAIP-218ENST00000513719 K7ELQ4 463 aaPredicted RBP16■□□□□ 0.15
SNCAIP-218ENST00000513719 CWC27Q6UX04 472 aaKnown RBP16■□□□□ 0.15
SNCAIP-218ENST00000513719 ZBTB38Q8NAP3 1195 aaPredicted RBP16■□□□□ 0.15
SNCAIP-218ENST00000513719 PUS3Q9BZE2 481 aaKnown RBP16■□□□□ 0.15
SNCAIP-218ENST00000513719 AK9Q5TCS8 1911 aa16■□□□□ 0.15
SNCAIP-218ENST00000513719 CRKLP46109 303 aaKnown RBP15.99■□□□□ 0.15
SNCAIP-218ENST00000513719 DZIP3Q86Y13 1208 aaKnown RBP15.99■□□□□ 0.15
SNCAIP-218ENST00000513719 DBNDD2Q9BQY9 259 aa15.99■□□□□ 0.15
SNCAIP-218ENST00000513719 EVI5LQ96CN4 794 aa15.99■□□□□ 0.15
SNCAIP-218ENST00000513719 CCDC85AQ96PX6 553 aaPredicted RBP15.99■□□□□ 0.15
SNCAIP-218ENST00000513719 PLA2G12BQ9BX93 195 aa15.99■□□□□ 0.15
SNCAIP-218ENST00000513719 LSG1Q9H089 658 aaKnown RBP15.99■□□□□ 0.15
SNCAIP-218ENST00000513719 PALLDQ8WX93 1383 aa15.98■□□□□ 0.15
SNCAIP-218ENST00000513719 CSF1RP07333 972 aa15.98■□□□□ 0.15
SNCAIP-218ENST00000513719 EDC3Q96F86 508 aaKnown RBP15.98■□□□□ 0.15
SNCAIP-218ENST00000513719 CCDC87Q9NVE4 849 aa15.98■□□□□ 0.15
SNCAIP-218ENST00000513719 UBN2Q6ZU65 1347 aa15.98■□□□□ 0.15
SNCAIP-218ENST00000513719 ERVV-1B6SEH8 477 aa15.97■□□□□ 0.15
SNCAIP-218ENST00000513719 CERKQ8TCT0 537 aa15.97■□□□□ 0.15
SNCAIP-218ENST00000513719 NDUFB9Q9Y6M9 179 aa15.97■□□□□ 0.15
SNCAIP-218ENST00000513719 EYA2O00167 538 aa15.97■□□□□ 0.15
SNCAIP-218ENST00000513719 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
SNCAIP-218ENST00000513719 USP21Q9UK80 565 aa15.97■□□□□ 0.15
SNCAIP-218ENST00000513719 TIMM10P62072 90 aa15.96■□□□□ 0.15
SNCAIP-218ENST00000513719 ZNF34Q8IZ26 560 aa15.96■□□□□ 0.15
SNCAIP-218ENST00000513719 IL17RAQ96F46 866 aa15.96■□□□□ 0.15
SNCAIP-218ENST00000513719 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
SNCAIP-218ENST00000513719 ATP5JP18859 108 aa15.96■□□□□ 0.15
SNCAIP-218ENST00000513719 HSPA4P34932 840 aa15.96■□□□□ 0.15
SNCAIP-218ENST00000513719 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
SNCAIP-218ENST00000513719 FAM227BQ96M60 508 aa15.96■□□□□ 0.15
SNCAIP-218ENST00000513719 SPATA31A6Q5VVP1 1343 aa15.96■□□□□ 0.15
SNCAIP-218ENST00000513719 NUP98P52948 1817 aa15.95■□□□□ 0.14
SNCAIP-218ENST00000513719 IL15P40933 162 aaPredicted RBP15.95■□□□□ 0.14
SNCAIP-218ENST00000513719 KCNQ4P56696 695 aa15.95■□□□□ 0.14
SNCAIP-218ENST00000513719 CHMP5Q9NZZ3 219 aa15.95■□□□□ 0.14
SNCAIP-218ENST00000513719 CDHR2Q9BYE9 1310 aa15.95■□□□□ 0.14
SNCAIP-218ENST00000513719 PTH1RQ03431 593 aa15.95■□□□□ 0.14
SNCAIP-218ENST00000513719 TTLL11Q8NHH1 800 aa15.95■□□□□ 0.14
SNCAIP-218ENST00000513719 DIAPH3Q9NSV4 1193 aa15.95■□□□□ 0.14
SNCAIP-218ENST00000513719 RAD50Q92878 1312 aa15.95■□□□□ 0.14
SNCAIP-218ENST00000513719 EPB41L2O43491 1005 aaKnown RBP15.94■□□□□ 0.14
SNCAIP-218ENST00000513719 CIAO1O76071 339 aa15.94■□□□□ 0.14
SNCAIP-218ENST00000513719 HSPA1LP34931 641 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms