RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 PPEF1O14829 653 aaPredicted RBP11.92□□□□□ -0.5
YIPF3-216ENST00000512713 DDNO94850 711 aaPredicted RBP11.92□□□□□ -0.5
YIPF3-216ENST00000512713 SLC10A5Q5PT55 438 aa11.92□□□□□ -0.5
YIPF3-216ENST00000512713 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
YIPF3-216ENST00000512713 OLFM4Q6UX06 510 aa11.92□□□□□ -0.5
YIPF3-216ENST00000512713 ANKRD13DQ6ZTN6 518 aa11.92□□□□□ -0.5
YIPF3-216ENST00000512713 SYNE4Q8N205 404 aa11.92□□□□□ -0.5
YIPF3-216ENST00000512713 PLBD2Q8NHP8 589 aa11.92□□□□□ -0.5
YIPF3-216ENST00000512713 JDP2Q8WYK2 163 aa11.92□□□□□ -0.5
YIPF3-216ENST00000512713 PSMD1Q99460 953 aa11.92□□□□□ -0.5
YIPF3-216ENST00000512713 MBIPQ9NS73 344 aa11.92□□□□□ -0.5
YIPF3-216ENST00000512713 IFT57Q9NWB7 429 aa11.92□□□□□ -0.5
YIPF3-216ENST00000512713 TRMT112Q9UI30 125 aaKnown RBP11.92□□□□□ -0.5
YIPF3-216ENST00000512713 SH3TC1Q8TE82 1336 aa11.91□□□□□ -0.5
YIPF3-216ENST00000512713 TCERG1O14776 1098 aaKnown RBP11.91□□□□□ -0.5
YIPF3-216ENST00000512713 IARSP41252 1262 aaKnown RBP11.91□□□□□ -0.5
YIPF3-216ENST00000512713 NLRP10Q86W26 655 aa11.91□□□□□ -0.5
YIPF3-216ENST00000512713 RIC1Q4ADV7 1423 aa11.91□□□□□ -0.5
YIPF3-216ENST00000512713 POTECB2RU33 542 aa11.9□□□□□ -0.5
YIPF3-216ENST00000512713 BBOX1O75936 387 aa11.9□□□□□ -0.5
YIPF3-216ENST00000512713 ZNF853P0CG23 659 aa11.9□□□□□ -0.5
YIPF3-216ENST00000512713 DNAJC5GQ8N7S2 189 aa11.9□□□□□ -0.5
YIPF3-216ENST00000512713 ARFGEF1Q9Y6D6 1849 aa11.9□□□□□ -0.5
YIPF3-216ENST00000512713 BRCA1P38398 1863 aaKnown RBP11.89□□□□□ -0.51
YIPF3-216ENST00000512713 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
YIPF3-216ENST00000512713 ELL2O00472 640 aaPredicted RBP11.89□□□□□ -0.51
YIPF3-216ENST00000512713 ANP32CO43423 234 aa11.89□□□□□ -0.51
YIPF3-216ENST00000512713 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
YIPF3-216ENST00000512713 GOLGA2Q08379 1002 aa11.89□□□□□ -0.51
YIPF3-216ENST00000512713 C3orf67Q6ZVT6 689 aa11.89□□□□□ -0.51
YIPF3-216ENST00000512713 DDX46Q7L014 1031 aaKnown RBP11.89□□□□□ -0.51
YIPF3-216ENST00000512713 LARGE2Q8N3Y3 721 aa11.89□□□□□ -0.51
YIPF3-216ENST00000512713 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
YIPF3-216ENST00000512713 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
YIPF3-216ENST00000512713 FZD9O00144 591 aa11.88□□□□□ -0.51
YIPF3-216ENST00000512713 EIF6P56537 245 aaKnown RBP11.88□□□□□ -0.51
YIPF3-216ENST00000512713 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
YIPF3-216ENST00000512713 RIC3Q7Z5B4 369 aa11.88□□□□□ -0.51
YIPF3-216ENST00000512713 GPC2Q8N158 579 aa11.88□□□□□ -0.51
YIPF3-216ENST00000512713 ATP6V0A2Q9Y487 856 aa11.88□□□□□ -0.51
YIPF3-216ENST00000512713 ATP5J2-PTCD1G3V325 749 aa11.87□□□□□ -0.51
YIPF3-216ENST00000512713 HSP90B1P14625 803 aaKnown RBP11.87□□□□□ -0.51
YIPF3-216ENST00000512713 HTRA3P83110 453 aa11.87□□□□□ -0.51
YIPF3-216ENST00000512713 CCDC30Q5VVM6 783 aa11.87□□□□□ -0.51
YIPF3-216ENST00000512713 PNMA8AQ86V59 439 aaPredicted RBP11.87□□□□□ -0.51
YIPF3-216ENST00000512713 SUPT20HQ8NEM7 779 aa11.87□□□□□ -0.51
YIPF3-216ENST00000512713 VPS33BQ9H267 617 aa11.87□□□□□ -0.51
YIPF3-216ENST00000512713 TAF1DQ9H5J8 278 aaPredicted RBP11.87□□□□□ -0.51
YIPF3-216ENST00000512713 MRS2Q9HD23 443 aa11.87□□□□□ -0.51
YIPF3-216ENST00000512713 HACL1Q9UJ83 578 aa11.87□□□□□ -0.51
YIPF3-216ENST00000512713 VIRMAQ69YN4 1812 aaKnown RBP11.87□□□□□ -0.51
YIPF3-216ENST00000512713 KDM3BQ7LBC6 1761 aa11.87□□□□□ -0.51
YIPF3-216ENST00000512713 ZNF541Q9H0D2 1346 aa11.86□□□□□ -0.51
YIPF3-216ENST00000512713 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
YIPF3-216ENST00000512713 TRIM28Q13263 835 aaKnown RBP11.86□□□□□ -0.51
YIPF3-216ENST00000512713 EAPPQ56P03 285 aaPredicted RBP11.86□□□□□ -0.51
YIPF3-216ENST00000512713 DPP8Q6V1X1 898 aaPredicted RBP11.86□□□□□ -0.51
YIPF3-216ENST00000512713 TMC4Q7Z404 712 aa11.86□□□□□ -0.51
YIPF3-216ENST00000512713 LDHDQ86WU2 507 aa11.86□□□□□ -0.51
YIPF3-216ENST00000512713 SP8Q8IXZ3 490 aa11.86□□□□□ -0.51
YIPF3-216ENST00000512713 NIM1KQ8IY84 436 aa11.86□□□□□ -0.51
YIPF3-216ENST00000512713 KLRG1Q96E93 195 aa11.86□□□□□ -0.51
YIPF3-216ENST00000512713 FAM89AQ96GI7 184 aa11.86□□□□□ -0.51
YIPF3-216ENST00000512713 GJA3Q9Y6H8 435 aa11.86□□□□□ -0.51
YIPF3-216ENST00000512713 BCORQ6W2J9 1755 aa11.86□□□□□ -0.51
YIPF3-216ENST00000512713 ABCC4O15439 1325 aa11.86□□□□□ -0.51
YIPF3-216ENST00000512713 PPIP5K2O43314 1243 aa11.85□□□□□ -0.51
YIPF3-216ENST00000512713 LMOD1P29536 600 aaPredicted RBP11.85□□□□□ -0.51
YIPF3-216ENST00000512713 EPHX2P34913 555 aa11.85□□□□□ -0.51
YIPF3-216ENST00000512713 GRAPQ13588 217 aa11.85□□□□□ -0.51
YIPF3-216ENST00000512713 CCDC27Q2M243 656 aa11.85□□□□□ -0.51
YIPF3-216ENST00000512713 CCDC184Q52MB2 194 aa11.85□□□□□ -0.51
YIPF3-216ENST00000512713 MPNDQ8N594 471 aa11.85□□□□□ -0.51
YIPF3-216ENST00000512713 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
YIPF3-216ENST00000512713 GRAPLQ8TC17 118 aaPredicted RBP11.85□□□□□ -0.51
YIPF3-216ENST00000512713 ZNF428Q96B54 188 aa11.85□□□□□ -0.51
YIPF3-216ENST00000512713 ISCA1Q9BUE6 129 aa11.85□□□□□ -0.51
YIPF3-216ENST00000512713 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
YIPF3-216ENST00000512713 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
YIPF3-216ENST00000512713 WWC1Q8IX03 1113 aa11.84□□□□□ -0.51
YIPF3-216ENST00000512713 STK31Q9BXU1 1019 aa11.84□□□□□ -0.51
YIPF3-216ENST00000512713 PHAXQ9H814 394 aaKnown RBP11.84□□□□□ -0.51
YIPF3-216ENST00000512713 ANKRD31Q8N7Z5 1873 aa11.84□□□□□ -0.51
YIPF3-216ENST00000512713 COL11A2P13942 1736 aaPredicted RBP11.83□□□□□ -0.52
YIPF3-216ENST00000512713 LAMB4A4D0S4 1761 aa11.83□□□□□ -0.52
YIPF3-216ENST00000512713 IRS4O14654 1257 aaPredicted RBP11.83□□□□□ -0.52
YIPF3-216ENST00000512713 POTEIP0CG38 1075 aa11.83□□□□□ -0.52
YIPF3-216ENST00000512713 POTEJP0CG39 1038 aa11.83□□□□□ -0.52
YIPF3-216ENST00000512713 SF3B3Q15393 1217 aaKnown RBP11.83□□□□□ -0.52
YIPF3-216ENST00000512713 AOC3Q16853 763 aa11.83□□□□□ -0.52
YIPF3-216ENST00000512713 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
YIPF3-216ENST00000512713 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
YIPF3-216ENST00000512713 ZBTB38Q8NAP3 1195 aaPredicted RBP11.83□□□□□ -0.52
YIPF3-216ENST00000512713 RTFDC1Q9BY42 306 aaPredicted RBP11.83□□□□□ -0.52
YIPF3-216ENST00000512713 ZNRF3Q9ULT6 936 aa11.83□□□□□ -0.52
YIPF3-216ENST00000512713 SLX4Q8IY92 1834 aa11.83□□□□□ -0.52
YIPF3-216ENST00000512713 JMYQ8N9B5 988 aa11.82□□□□□ -0.52
YIPF3-216ENST00000512713 CCDC191Q8NCU4 936 aa11.82□□□□□ -0.52
YIPF3-216ENST00000512713 TSR2Q969E8 191 aaKnown RBP11.82□□□□□ -0.52
YIPF3-216ENST00000512713 MYD88Q99836 296 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms