RNA–Protein interactions for RNA: ENST00000512304.2

PROM1-213, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-213ENST00000512304 ZNF790Q6PG37 636 aa12.47□□□□□ -0.41
PROM1-213ENST00000512304 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.41
PROM1-213ENST00000512304 SCN7AQ01118 1682 aa12.46□□□□□ -0.41
PROM1-213ENST00000512304 MAP2K2P36507 400 aa12.46□□□□□ -0.41
PROM1-213ENST00000512304 HLFQ16534 295 aa12.46□□□□□ -0.41
PROM1-213ENST00000512304 RTKN2Q8IZC4 609 aa12.46□□□□□ -0.41
PROM1-213ENST00000512304 TTC5Q8N0Z6 440 aa12.46□□□□□ -0.41
PROM1-213ENST00000512304 SCN4AP35499 1836 aa12.46□□□□□ -0.42
PROM1-213ENST00000512304 ABCC12Q96J65 1359 aa12.45□□□□□ -0.42
PROM1-213ENST00000512304 CACNA1SQ13698 1873 aa12.45□□□□□ -0.42
PROM1-213ENST00000512304 HIRAP54198 1017 aaPredicted RBP12.45□□□□□ -0.42
PROM1-213ENST00000512304 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
PROM1-213ENST00000512304 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
PROM1-213ENST00000512304 NBPF26B4DH59 902 aa12.44□□□□□ -0.42
PROM1-213ENST00000512304 LMOD1P29536 600 aaPredicted RBP12.44□□□□□ -0.42
PROM1-213ENST00000512304 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
PROM1-213ENST00000512304 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
PROM1-213ENST00000512304 NBPF10Q6P3W6 841 aaKnown RBP12.44□□□□□ -0.42
PROM1-213ENST00000512304 NBPF15Q8N660 670 aa12.44□□□□□ -0.42
PROM1-213ENST00000512304 NIP7Q9Y221 180 aaKnown RBP eCLIP12.44□□□□□ -0.42
PROM1-213ENST00000512304 LARGE2Q8N3Y3 721 aa12.43□□□□□ -0.42
PROM1-213ENST00000512304 TRPM4Q8TD43 1214 aa12.43□□□□□ -0.42
PROM1-213ENST00000512304 JDP2Q8WYK2 163 aa12.43□□□□□ -0.42
PROM1-213ENST00000512304 GMPSP49915 693 aaPredicted RBP12.42□□□□□ -0.42
PROM1-213ENST00000512304 PRPF38BQ5VTL8 546 aaKnown RBP12.42□□□□□ -0.42
PROM1-213ENST00000512304 USP50Q70EL3 339 aaPredicted RBP12.42□□□□□ -0.42
PROM1-213ENST00000512304 PSMD1Q99460 953 aa12.42□□□□□ -0.42
PROM1-213ENST00000512304 CXCL9Q07325 125 aa12.41□□□□□ -0.42
PROM1-213ENST00000512304 AOC3Q16853 763 aa12.41□□□□□ -0.42
PROM1-213ENST00000512304 USP48Q86UV5 1035 aa12.41□□□□□ -0.42
PROM1-213ENST00000512304 FMNL2Q96PY5 1086 aa12.41□□□□□ -0.42
PROM1-213ENST00000512304 GPRC5DQ9NZD1 345 aa12.41□□□□□ -0.42
PROM1-213ENST00000512304 UBR2Q8IWV8 1755 aa12.41□□□□□ -0.42
PROM1-213ENST00000512304 FAM155AB1AL88 458 aaPredicted RBP12.4□□□□□ -0.42
PROM1-213ENST00000512304 TEFQ10587 303 aa12.4□□□□□ -0.42
PROM1-213ENST00000512304 TPTE2Q6XPS3 522 aa12.4□□□□□ -0.42
PROM1-213ENST00000512304 ADARB2Q9NS39 739 aaKnown RBP12.4□□□□□ -0.42
PROM1-213ENST00000512304 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 PITPNM1O00562 1244 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 CA12O43570 354 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 TRPA1O75762 1119 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 EGFRP00533 1210 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 KIF23Q02241 960 aaPredicted RBP12.39□□□□□ -0.43
PROM1-213ENST00000512304 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 CRY2Q49AN0 593 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 PHACTR3Q96KR7 559 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 TEX13AQ9BXU3 409 aaPredicted RBP12.39□□□□□ -0.43
PROM1-213ENST00000512304 CASP8AP2Q9UKL3 1982 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 PDE4DIPQ5VU43 2346 aa12.39□□□□□ -0.43
PROM1-213ENST00000512304 PPIP5K2O43314 1243 aa12.38□□□□□ -0.43
PROM1-213ENST00000512304 RAD17O75943 681 aa12.38□□□□□ -0.43
PROM1-213ENST00000512304 ALDH1B1P30837 517 aa12.38□□□□□ -0.43
PROM1-213ENST00000512304 HUNKP57058 714 aa12.38□□□□□ -0.43
PROM1-213ENST00000512304 CNGB1Q14028 1251 aaPredicted RBP12.38□□□□□ -0.43
PROM1-213ENST00000512304 CLEC4GQ6UXB4 293 aa12.38□□□□□ -0.43
PROM1-213ENST00000512304 NIM1KQ8IY84 436 aa12.38□□□□□ -0.43
PROM1-213ENST00000512304 RNF186Q9NXI6 227 aa12.38□□□□□ -0.43
PROM1-213ENST00000512304 NPC1L1Q9UHC9 1359 aa12.38□□□□□ -0.43
PROM1-213ENST00000512304 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
PROM1-213ENST00000512304 BTBD11A6QL63 1104 aa12.37□□□□□ -0.43
PROM1-213ENST00000512304 GPTP24298 496 aa12.37□□□□□ -0.43
PROM1-213ENST00000512304 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
PROM1-213ENST00000512304 NPM2Q86SE8 214 aaKnown RBP12.37□□□□□ -0.43
PROM1-213ENST00000512304 PGAP2Q9UHJ9 254 aa12.37□□□□□ -0.43
PROM1-213ENST00000512304 GNAT3A8MTJ3 354 aa12.36□□□□□ -0.43
PROM1-213ENST00000512304 ADM5C9JUS6 153 aa12.36□□□□□ -0.43
PROM1-213ENST00000512304 PPEF1O14829 653 aaPredicted RBP12.36□□□□□ -0.43
PROM1-213ENST00000512304 HSPA5P11021 654 aaKnown RBP12.36□□□□□ -0.43
PROM1-213ENST00000512304 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
PROM1-213ENST00000512304 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
PROM1-213ENST00000512304 HHIPL1Q96JK4 782 aa12.36□□□□□ -0.43
PROM1-213ENST00000512304 HPS5Q9UPZ3 1129 aa12.36□□□□□ -0.43
PROM1-213ENST00000512304 UBN2Q6ZU65 1347 aa12.36□□□□□ -0.43
PROM1-213ENST00000512304 DIAPH1O60610 1272 aaKnown RBP12.35□□□□□ -0.43
PROM1-213ENST00000512304 HOXA10P31260 410 aaPredicted RBP12.35□□□□□ -0.43
PROM1-213ENST00000512304 NOGQ13253 232 aa12.35□□□□□ -0.43
PROM1-213ENST00000512304 DCTN1Q14203 1278 aa12.35□□□□□ -0.43
PROM1-213ENST00000512304 SUSD4Q5VX71 490 aa12.35□□□□□ -0.43
PROM1-213ENST00000512304 TTLL7Q6ZT98 887 aa12.35□□□□□ -0.43
PROM1-213ENST00000512304 MCM10Q7L590 875 aa12.35□□□□□ -0.43
PROM1-213ENST00000512304 SAMD7Q7Z3H4 446 aa12.35□□□□□ -0.43
PROM1-213ENST00000512304 MIS18AQ9NYP9 233 aa12.35□□□□□ -0.43
PROM1-213ENST00000512304 BCORQ6W2J9 1755 aa12.35□□□□□ -0.43
PROM1-213ENST00000512304 ASTN2O75129 1339 aaPredicted RBP12.35□□□□□ -0.43
PROM1-213ENST00000512304 YDJCA8MPS7 323 aa12.34□□□□□ -0.43
PROM1-213ENST00000512304 U2SURPO15042 1029 aaKnown RBP12.34□□□□□ -0.43
PROM1-213ENST00000512304 RPGRQ92834 1020 aaKnown RBP12.34□□□□□ -0.43
PROM1-213ENST00000512304 ZNF428Q96B54 188 aa12.34□□□□□ -0.43
PROM1-213ENST00000512304 CSRNP1Q96S65 589 aa12.34□□□□□ -0.43
PROM1-213ENST00000512304 ZNRF3Q9ULT6 936 aa12.34□□□□□ -0.43
PROM1-213ENST00000512304 ZNF652Q9Y2D9 606 aa12.34□□□□□ -0.43
PROM1-213ENST00000512304 CEMIPQ8WUJ3 1361 aa12.33□□□□□ -0.44
PROM1-213ENST00000512304 RGMBQ6NW40 437 aa12.33□□□□□ -0.44
PROM1-213ENST00000512304 SNRPA1P09661 255 aaKnown RBP12.32□□□□□ -0.44
PROM1-213ENST00000512304 TBC1D10BQ4KMP7 808 aaPredicted RBP12.32□□□□□ -0.44
PROM1-213ENST00000512304 HABP4Q5JVS0 413 aaKnown RBP12.32□□□□□ -0.44
PROM1-213ENST00000512304 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
PROM1-213ENST00000512304 CDC37L1Q7L3B6 337 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms