RNA–Protein interactions for RNA: ENST00000512303.1

TRIO-219, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-219ENST00000512303 SPIRE2Q8WWL2 714 aa9.42□□□□□ -0.9
TRIO-219ENST00000512303 IP6K1Q92551 441 aa9.42□□□□□ -0.9
TRIO-219ENST00000512303 PIK3C2AO00443 1686 aa9.42□□□□□ -0.9
TRIO-219ENST00000512303 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
TRIO-219ENST00000512303 ERICH6Q7L0X2 663 aa9.41□□□□□ -0.9
TRIO-219ENST00000512303 HDGFL2Q7Z4V5 671 aaPredicted RBP9.41□□□□□ -0.9
TRIO-219ENST00000512303 PRR14Q9BWN1 585 aa9.41□□□□□ -0.9
TRIO-219ENST00000512303 TBC1D2Q9BYX2 928 aa9.41□□□□□ -0.9
TRIO-219ENST00000512303 WBP1LQ9NX94 342 aa9.41□□□□□ -0.9
TRIO-219ENST00000512303 KIAA1210Q9ULL0 1709 aa9.41□□□□□ -0.9
TRIO-219ENST00000512303 NSD2O96028 1365 aa9.4□□□□□ -0.9
TRIO-219ENST00000512303 WASHC2AQ641Q2 1341 aa9.4□□□□□ -0.9
TRIO-219ENST00000512303 KCNQ4P56696 695 aa9.4□□□□□ -0.9
TRIO-219ENST00000512303 USP46P62068 366 aa9.4□□□□□ -0.9
TRIO-219ENST00000512303 TMF1P82094 1093 aa9.4□□□□□ -0.9
TRIO-219ENST00000512303 ARHGAP27Q6ZUM4 889 aa9.4□□□□□ -0.9
TRIO-219ENST00000512303 CICQ96RK0 1608 aaPredicted RBP9.4□□□□□ -0.9
TRIO-219ENST00000512303 PALLDQ8WX93 1383 aa9.39□□□□□ -0.91
TRIO-219ENST00000512303 CENPBP07199 599 aaPredicted RBP9.39□□□□□ -0.91
TRIO-219ENST00000512303 HSPA1AP0DMV8 641 aaKnown RBP9.39□□□□□ -0.91
TRIO-219ENST00000512303 HSPA1BP0DMV9 641 aaKnown RBP9.39□□□□□ -0.91
TRIO-219ENST00000512303 PTPN5P54829 565 aa9.39□□□□□ -0.91
TRIO-219ENST00000512303 NBPF1Q3BBV0 1214 aa9.39□□□□□ -0.91
TRIO-219ENST00000512303 NLGN1Q8N2Q7 840 aa9.39□□□□□ -0.91
TRIO-219ENST00000512303 RAPGEF4Q8WZA2 1011 aa9.39□□□□□ -0.91
TRIO-219ENST00000512303 RNF166Q96A37 237 aaPredicted RBP9.39□□□□□ -0.91
TRIO-219ENST00000512303 GOPCQ9HD26 462 aa9.39□□□□□ -0.91
TRIO-219ENST00000512303 NMRK2Q9NPI5 230 aa9.39□□□□□ -0.91
TRIO-219ENST00000512303 TERF2IPQ9NYB0 399 aa9.39□□□□□ -0.91
TRIO-219ENST00000512303 BCS1LQ9Y276 419 aa9.39□□□□□ -0.91
TRIO-219ENST00000512303 PCDH11XQ9BZA7 1347 aa9.38□□□□□ -0.91
TRIO-219ENST00000512303 PCDH11YQ9BZA8 1340 aa9.38□□□□□ -0.91
TRIO-219ENST00000512303 ST20-MTHFSA0A0A6YYL1 179 aa9.38□□□□□ -0.91
TRIO-219ENST00000512303 ACTN4O43707 911 aaKnown RBP9.38□□□□□ -0.91
TRIO-219ENST00000512303 GRIPAP1Q4V328 841 aa9.38□□□□□ -0.91
TRIO-219ENST00000512303 NYAP1Q6ZVC0 841 aa9.38□□□□□ -0.91
TRIO-219ENST00000512303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRIO-219ENST00000512303 PUS7Q96PZ0 661 aaKnown RBP9.38□□□□□ -0.91
TRIO-219ENST00000512303 CCDC87Q9NVE4 849 aa9.38□□□□□ -0.91
TRIO-219ENST00000512303 KIF7Q2M1P5 1343 aa9.37□□□□□ -0.91
TRIO-219ENST00000512303 ATP6V1AP38606 617 aa9.37□□□□□ -0.91
TRIO-219ENST00000512303 FUT2Q10981 343 aa9.37□□□□□ -0.91
TRIO-219ENST00000512303 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
TRIO-219ENST00000512303 SH3D19Q5HYK7 790 aa9.37□□□□□ -0.91
TRIO-219ENST00000512303 MYSM1Q5VVJ2 828 aa9.37□□□□□ -0.91
TRIO-219ENST00000512303 SMG6Q86US8 1419 aaKnown RBP9.37□□□□□ -0.91
TRIO-219ENST00000512303 SBNO2Q9Y2G9 1366 aa9.37□□□□□ -0.91
TRIO-219ENST00000512303 TATP17735 454 aaPredicted RBP9.36□□□□□ -0.91
TRIO-219ENST00000512303 AMPHP49418 695 aa9.36□□□□□ -0.91
TRIO-219ENST00000512303 C9orf131Q5VYM1 1079 aa9.36□□□□□ -0.91
TRIO-219ENST00000512303 PRDM10Q9NQV6 1147 aa9.36□□□□□ -0.91
TRIO-219ENST00000512303 GTF3C3Q9Y5Q9 886 aa9.36□□□□□ -0.91
TRIO-219ENST00000512303 EDC4Q6P2E9 1401 aaKnown RBP9.36□□□□□ -0.91
TRIO-219ENST00000512303 MOXD2PA6NHM9 499 aa9.35□□□□□ -0.91
TRIO-219ENST00000512303 HOXA2O43364 376 aa9.35□□□□□ -0.91
TRIO-219ENST00000512303 MMP10P09238 476 aa9.35□□□□□ -0.91
TRIO-219ENST00000512303 VEGFAP15692 232 aaPredicted RBP9.35□□□□□ -0.91
TRIO-219ENST00000512303 MPRIPQ6WCQ1 1025 aa9.35□□□□□ -0.91
TRIO-219ENST00000512303 RIC3Q7Z5B4 369 aa9.35□□□□□ -0.91
TRIO-219ENST00000512303 NME9Q86XW9 330 aa9.35□□□□□ -0.91
TRIO-219ENST00000512303 LTV1Q96GA3 475 aaPredicted RBP9.35□□□□□ -0.91
TRIO-219ENST00000512303 WDR90Q96KV7 1748 aa9.35□□□□□ -0.91
TRIO-219ENST00000512303 POLR3EQ9NVU0 708 aa9.35□□□□□ -0.91
TRIO-219ENST00000512303 PIM2Q9P1W9 311 aa9.35□□□□□ -0.91
TRIO-219ENST00000512303 RTL1A6NKG5 1358 aa9.35□□□□□ -0.91
TRIO-219ENST00000512303 PXDNLA1KZ92 1463 aa9.34□□□□□ -0.91
TRIO-219ENST00000512303 LY75O60449 1722 aa9.34□□□□□ -0.91
TRIO-219ENST00000512303 GJA5P36382 358 aa9.34□□□□□ -0.91
TRIO-219ENST00000512303 COG3Q96JB2 828 aa9.34□□□□□ -0.91
TRIO-219ENST00000512303 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
TRIO-219ENST00000512303 FAM208AQ9UK61 1670 aaKnown RBP9.33□□□□□ -0.92
TRIO-219ENST00000512303 LOC102724428A0A0B4J2F2 783 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 SPTLC1O15269 473 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 NDUFV2P19404 249 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 HOXC9P31274 260 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 SIK1P57059 783 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 HTRA3P83110 453 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 MMRN1Q13201 1228 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 DALRD3Q5D0E6 543 aaKnown RBP9.33□□□□□ -0.92
TRIO-219ENST00000512303 TRAPPC3LQ5T215 181 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 AIDAQ96BJ3 306 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 PCMTD1Q96MG8 357 aaPredicted RBP9.33□□□□□ -0.92
TRIO-219ENST00000512303 TESK2Q96S53 571 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 RRAGCQ9HB90 399 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
TRIO-219ENST00000512303 PARP3Q9Y6F1 533 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 CD163L1Q9NR16 1453 aa9.33□□□□□ -0.92
TRIO-219ENST00000512303 A0A0G2JLW4 131 aa9.32□□□□□ -0.92
TRIO-219ENST00000512303 CLK2P49760 499 aaKnown RBP9.32□□□□□ -0.92
TRIO-219ENST00000512303 RSBN1LQ6PCB5 846 aaPredicted RBP9.32□□□□□ -0.92
TRIO-219ENST00000512303 TMC1Q8TDI8 760 aa9.32□□□□□ -0.92
TRIO-219ENST00000512303 RNF181Q9P0P0 153 aa9.32□□□□□ -0.92
TRIO-219ENST00000512303 PCDHB3Q9Y5E6 796 aa9.32□□□□□ -0.92
TRIO-219ENST00000512303 MAP3K19Q56UN5 1328 aa9.31□□□□□ -0.92
TRIO-219ENST00000512303 PCNTO95613 3336 aa9.31□□□□□ -0.92
TRIO-219ENST00000512303 FDX1P10109 184 aa9.31□□□□□ -0.92
TRIO-219ENST00000512303 CTCFP49711 727 aaPredicted RBP9.31□□□□□ -0.92
TRIO-219ENST00000512303 RALBP1Q15311 655 aa9.31□□□□□ -0.92
TRIO-219ENST00000512303 TUSC1Q2TAM9 212 aa9.31□□□□□ -0.92
TRIO-219ENST00000512303 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms