RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-215ENST00000512098 NEUROD1Q13562 356 aa17.54■□□□□ 0.4
SSBP2-215ENST00000512098 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
SSBP2-215ENST00000512098 NBPF5PQ86XG9 351 aaPredicted RBP17.52■□□□□ 0.4
SSBP2-215ENST00000512098 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.4
SSBP2-215ENST00000512098 LGR6Q9HBX8 967 aa17.52■□□□□ 0.4
SSBP2-215ENST00000512098 AEBP1Q8IUX7 1158 aa17.51■□□□□ 0.39
SSBP2-215ENST00000512098 REM2Q8IYK8 340 aaPredicted RBP17.51■□□□□ 0.39
SSBP2-215ENST00000512098 CSRNP1Q96S65 589 aa17.51■□□□□ 0.39
SSBP2-215ENST00000512098 RANBP2P49792 3224 aaKnown RBP17.51■□□□□ 0.39
SSBP2-215ENST00000512098 CDHR2Q9BYE9 1310 aa17.5■□□□□ 0.39
SSBP2-215ENST00000512098 POLR2AP24928 1970 aaKnown RBP17.5■□□□□ 0.39
SSBP2-215ENST00000512098 SLC17A8Q8NDX2 589 aa17.5■□□□□ 0.39
SSBP2-215ENST00000512098 TEX13AQ9BXU3 409 aaPredicted RBP17.5■□□□□ 0.39
SSBP2-215ENST00000512098 RNMTO43148 476 aaKnown RBP17.49■□□□□ 0.39
SSBP2-215ENST00000512098 FBXO46Q6PJ61 603 aaPredicted RBP17.49■□□□□ 0.39
SSBP2-215ENST00000512098 CLEC4GQ6UXB4 293 aa17.49■□□□□ 0.39
SSBP2-215ENST00000512098 HIRAP54198 1017 aaPredicted RBP17.48■□□□□ 0.39
SSBP2-215ENST00000512098 TPTE2Q6XPS3 522 aa17.48■□□□□ 0.39
SSBP2-215ENST00000512098 NIM1KQ8IY84 436 aa17.48■□□□□ 0.39
SSBP2-215ENST00000512098 HDAC9Q9UKV0 1011 aa17.48■□□□□ 0.39
SSBP2-215ENST00000512098 ZNF330Q9Y3S2 320 aaPredicted RBP17.48■□□□□ 0.39
SSBP2-215ENST00000512098 RBBP6Q7Z6E9 1792 aaKnown RBP17.48■□□□□ 0.39
SSBP2-215ENST00000512098 SLC10A3P09131 477 aa17.47■□□□□ 0.39
SSBP2-215ENST00000512098 ZNF157P51786 506 aaPredicted RBP17.47■□□□□ 0.39
SSBP2-215ENST00000512098 CDCA8Q53HL2 280 aa17.47■□□□□ 0.39
SSBP2-215ENST00000512098 NPM2Q86SE8 214 aaKnown RBP17.47■□□□□ 0.39
SSBP2-215ENST00000512098 GBA2Q9HCG7 927 aaPredicted RBP17.47■□□□□ 0.39
SSBP2-215ENST00000512098 NPC1L1Q9UHC9 1359 aa17.46■□□□□ 0.39
SSBP2-215ENST00000512098 VPS33BQ9H267 617 aa17.46■□□□□ 0.39
SSBP2-215ENST00000512098 COLQQ9Y215 455 aaPredicted RBP17.46■□□□□ 0.39
SSBP2-215ENST00000512098 HEG1Q9ULI3 1381 aa17.45■□□□□ 0.38
SSBP2-215ENST00000512098 GMPSP49915 693 aaPredicted RBP17.45■□□□□ 0.38
SSBP2-215ENST00000512098 CRY2Q49AN0 593 aa17.45■□□□□ 0.38
SSBP2-215ENST00000512098 NOM1Q5C9Z4 860 aaKnown RBP17.45■□□□□ 0.38
SSBP2-215ENST00000512098 DZIP3Q86Y13 1208 aaKnown RBP17.45■□□□□ 0.38
SSBP2-215ENST00000512098 C2orf69Q8N8R5 385 aa17.45■□□□□ 0.38
SSBP2-215ENST00000512098 ZNF296Q8WUU4 475 aaPredicted RBP17.45■□□□□ 0.38
SSBP2-215ENST00000512098 CXCL9Q07325 125 aa17.44■□□□□ 0.38
SSBP2-215ENST00000512098 SULT6B1Q6IMI4 303 aa17.44■□□□□ 0.38
SSBP2-215ENST00000512098 USP48Q86UV5 1035 aa17.44■□□□□ 0.38
SSBP2-215ENST00000512098 TTC5Q8N0Z6 440 aa17.44■□□□□ 0.38
SSBP2-215ENST00000512098 RGL2O15211 777 aa17.43■□□□□ 0.38
SSBP2-215ENST00000512098 TRPM4Q8TD43 1214 aa17.43■□□□□ 0.38
SSBP2-215ENST00000512098 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
SSBP2-215ENST00000512098 INTS3Q68E01 1043 aaKnown RBP17.42■□□□□ 0.38
SSBP2-215ENST00000512098 ZNF496Q96IT1 587 aaPredicted RBP17.42■□□□□ 0.38
SSBP2-215ENST00000512098 ZNRF3Q9ULT6 936 aa17.42■□□□□ 0.38
SSBP2-215ENST00000512098 PPIP5K2O43314 1243 aa17.41■□□□□ 0.38
SSBP2-215ENST00000512098 A1BGP04217 495 aa17.41■□□□□ 0.38
SSBP2-215ENST00000512098 TNNT2P45379 298 aaPredicted RBP17.41■□□□□ 0.38
SSBP2-215ENST00000512098 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
SSBP2-215ENST00000512098 POTEFA5A3E0 1075 aa17.4■□□□□ 0.38
SSBP2-215ENST00000512098 HOXA10P31260 410 aaPredicted RBP17.4■□□□□ 0.38
SSBP2-215ENST00000512098 DLK2Q6UY11 383 aa17.4■□□□□ 0.38
SSBP2-215ENST00000512098 KIF7Q2M1P5 1343 aa17.39■□□□□ 0.37
SSBP2-215ENST00000512098 AOC3Q16853 763 aa17.38■□□□□ 0.37
SSBP2-215ENST00000512098 ZNF790Q6PG37 636 aa17.38■□□□□ 0.37
SSBP2-215ENST00000512098 KRT26Q7Z3Y9 468 aa17.38■□□□□ 0.37
SSBP2-215ENST00000512098 BCL2L13Q9BXK5 485 aa17.38■□□□□ 0.37
SSBP2-215ENST00000512098 CNOT7Q9UIV1 285 aaKnown RBP17.38■□□□□ 0.37
SSBP2-215ENST00000512098 NIP7Q9Y221 180 aaKnown RBP eCLIP17.38■□□□□ 0.37
SSBP2-215ENST00000512098 RIC1Q4ADV7 1423 aa17.38■□□□□ 0.37
SSBP2-215ENST00000512098 H7C1D1 291 aa17.37■□□□□ 0.37
SSBP2-215ENST00000512098 GPR25O00155 361 aa17.37■□□□□ 0.37
SSBP2-215ENST00000512098 MNX1P50219 401 aaPredicted RBP17.37■□□□□ 0.37
SSBP2-215ENST00000512098 RASAL3Q86YV0 1011 aa17.37■□□□□ 0.37
SSBP2-215ENST00000512098 TBC1D8O95759 1140 aa17.36■□□□□ 0.37
SSBP2-215ENST00000512098 TNIP1Q15025 636 aa17.36■□□□□ 0.37
SSBP2-215ENST00000512098 OTUD5Q96G74 571 aa17.36■□□□□ 0.37
SSBP2-215ENST00000512098 SIPA1L3O60292 1781 aaPredicted RBP17.35■□□□□ 0.37
SSBP2-215ENST00000512098 CRAMP1Q96RY5 1269 aa17.35■□□□□ 0.37
SSBP2-215ENST00000512098 LAMA3Q16787 3333 aa17.35■□□□□ 0.37
SSBP2-215ENST00000512098 UNC80Q8N2C7 3258 aa17.34■□□□□ 0.37
SSBP2-215ENST00000512098 GTF2E1P29083 439 aaPredicted RBP17.34■□□□□ 0.37
SSBP2-215ENST00000512098 IL13P35225 146 aa17.34■□□□□ 0.37
SSBP2-215ENST00000512098 FMNL2Q96PY5 1086 aa17.34■□□□□ 0.37
SSBP2-215ENST00000512098 CFHR5Q9BXR6 569 aa17.34■□□□□ 0.37
SSBP2-215ENST00000512098 RTFDC1Q9BY42 306 aaPredicted RBP17.34■□□□□ 0.37
SSBP2-215ENST00000512098 PITPNM2Q9BZ72 1349 aa17.34■□□□□ 0.37
SSBP2-215ENST00000512098 ABCC12Q96J65 1359 aa17.33■□□□□ 0.36
SSBP2-215ENST00000512098 SHTN1A0MZ66 631 aa17.33■□□□□ 0.36
SSBP2-215ENST00000512098 PPEF1O14829 653 aaPredicted RBP17.33■□□□□ 0.36
SSBP2-215ENST00000512098 MICALL2Q8IY33 904 aa17.33■□□□□ 0.36
SSBP2-215ENST00000512098 SUPT20HQ8NEM7 779 aa17.33■□□□□ 0.36
SSBP2-215ENST00000512098 DPF2Q92785 391 aa17.33■□□□□ 0.36
SSBP2-215ENST00000512098 RPGRQ92834 1020 aaKnown RBP17.33■□□□□ 0.36
SSBP2-215ENST00000512098 FAM177BA6PVY3 158 aa17.32■□□□□ 0.36
SSBP2-215ENST00000512098 FKTNO75072 461 aa17.32■□□□□ 0.36
SSBP2-215ENST00000512098 SLC51AQ86UW1 340 aa17.32■□□□□ 0.36
SSBP2-215ENST00000512098 DCPSQ96C86 337 aaKnown RBP17.32■□□□□ 0.36
SSBP2-215ENST00000512098 ADM5C9JUS6 153 aa17.31■□□□□ 0.36
SSBP2-215ENST00000512098 RAD17O75943 681 aa17.31■□□□□ 0.36
SSBP2-215ENST00000512098 TM4SF4P48230 202 aa17.31■□□□□ 0.36
SSBP2-215ENST00000512098 MTHFSDQ2M296 383 aaKnown RBP17.31■□□□□ 0.36
SSBP2-215ENST00000512098 NYXQ9GZU5 481 aa17.31■□□□□ 0.36
SSBP2-215ENST00000512098 FKBP1BP68106 108 aa17.3■□□□□ 0.36
SSBP2-215ENST00000512098 KIAA2012Q0VF49 1180 aa17.3■□□□□ 0.36
SSBP2-215ENST00000512098 SAMD7Q7Z3H4 446 aa17.3■□□□□ 0.36
SSBP2-215ENST00000512098 RBM17Q96I25 401 aaKnown RBP17.3■□□□□ 0.36
SSBP2-215ENST00000512098 EN2P19622 333 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms