RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 DRC1Q96MC2 740 aa16.57■□□□□ 0.24
TRIO-218ENST00000512070 RBM27Q9P2N5 1060 aaKnown RBP16.56■□□□□ 0.24
TRIO-218ENST00000512070 TMCO5BA8MYB1 307 aa16.56■□□□□ 0.24
TRIO-218ENST00000512070 SEPT6Q14141 434 aa16.56■□□□□ 0.24
TRIO-218ENST00000512070 CCDC40Q4G0X9 1142 aa16.56■□□□□ 0.24
TRIO-218ENST00000512070 LMAN1P49257 510 aa16.56■□□□□ 0.24
TRIO-218ENST00000512070 CBX1P83916 185 aa16.56■□□□□ 0.24
TRIO-218ENST00000512070 RALGAPBQ86X10 1494 aa16.56■□□□□ 0.24
TRIO-218ENST00000512070 ZNF644Q9H582 1327 aaPredicted RBP16.56■□□□□ 0.24
TRIO-218ENST00000512070 MSL1Q68DK7 614 aa16.56■□□□□ 0.24
TRIO-218ENST00000512070 ABCF2Q9UG63 623 aa16.56■□□□□ 0.24
TRIO-218ENST00000512070 ARFGAP2Q8N6H7 521 aa16.56■□□□□ 0.24
TRIO-218ENST00000512070 NOP2P46087 812 aaKnown RBP16.56■□□□□ 0.24
TRIO-218ENST00000512070 CCDC14Q49A88 953 aa16.56■□□□□ 0.24
TRIO-218ENST00000512070 BAG3O95817 575 aa16.55■□□□□ 0.24
TRIO-218ENST00000512070 TMC6Q7Z403 805 aa16.55■□□□□ 0.24
TRIO-218ENST00000512070 PROSER2Q86WR7 435 aaPredicted RBP16.55■□□□□ 0.24
TRIO-218ENST00000512070 EXOC1Q9NV70 894 aa16.55■□□□□ 0.24
TRIO-218ENST00000512070 FAM177BA6PVY3 158 aa16.55■□□□□ 0.24
TRIO-218ENST00000512070 MAP4K4O95819 1239 aaPredicted RBP16.55■□□□□ 0.24
TRIO-218ENST00000512070 CCDC6Q16204 474 aa16.55■□□□□ 0.24
TRIO-218ENST00000512070 TTC21BQ7Z4L5 1316 aa16.55■□□□□ 0.24
TRIO-218ENST00000512070 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
TRIO-218ENST00000512070 UBA5Q9GZZ9 404 aa16.54■□□□□ 0.24
TRIO-218ENST00000512070 NOL3O60936 208 aaKnown RBP16.54■□□□□ 0.24
TRIO-218ENST00000512070 NLRP5P59047 1200 aa16.54■□□□□ 0.24
TRIO-218ENST00000512070 TAF7Q15545 349 aaPredicted RBP16.54■□□□□ 0.24
TRIO-218ENST00000512070 ANAPC4Q9UJX5 808 aa16.54■□□□□ 0.24
TRIO-218ENST00000512070 EIF2AK4Q9P2K8 1649 aaKnown RBP16.54■□□□□ 0.24
TRIO-218ENST00000512070 KRT83P78385 493 aa16.54■□□□□ 0.24
TRIO-218ENST00000512070 ZPR1O75312 459 aa16.54■□□□□ 0.24
TRIO-218ENST00000512070 PRDM11Q9NQV5 511 aa16.54■□□□□ 0.24
TRIO-218ENST00000512070 CABP1Q9NZU7 370 aa16.54■□□□□ 0.24
TRIO-218ENST00000512070 CCDC61Q9Y6R9 512 aa16.54■□□□□ 0.24
TRIO-218ENST00000512070 ALDH3A1P30838 453 aa16.54■□□□□ 0.24
TRIO-218ENST00000512070 ATP2A2P16615 1042 aaKnown RBP16.53■□□□□ 0.24
TRIO-218ENST00000512070 TSGA10Q9BZW7 698 aa16.53■□□□□ 0.24
TRIO-218ENST00000512070 SYCP3Q8IZU3 236 aa16.53■□□□□ 0.24
TRIO-218ENST00000512070 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
TRIO-218ENST00000512070 STIM2Q9P246 746 aa16.53■□□□□ 0.24
TRIO-218ENST00000512070 LDHCP07864 332 aa16.53■□□□□ 0.24
TRIO-218ENST00000512070 ZWINTO95229 277 aa16.53■□□□□ 0.24
TRIO-218ENST00000512070 GTF2F1P35269 517 aaKnown RBP eCLIP16.53■□□□□ 0.241e-6■■■■■ 29.8
TRIO-218ENST00000512070 MKRN1Q9UHC7 482 aaKnown RBP16.53■□□□□ 0.24
TRIO-218ENST00000512070 CTAGE15A4D2H0 777 aa16.53■□□□□ 0.24
TRIO-218ENST00000512070 CTAGE8P0CG41 777 aa16.53■□□□□ 0.24
TRIO-218ENST00000512070 CTAGE6Q86UF2 777 aa16.53■□□□□ 0.24
TRIO-218ENST00000512070 CTAGE4Q8IX94 777 aa16.53■□□□□ 0.24
TRIO-218ENST00000512070 IFT140Q96RY7 1462 aa16.53■□□□□ 0.24
TRIO-218ENST00000512070 IFIT3O14879 490 aaKnown RBP16.52■□□□□ 0.24
TRIO-218ENST00000512070 KRT86O43790 486 aa16.52■□□□□ 0.24
TRIO-218ENST00000512070 IARSP41252 1262 aaKnown RBP16.52■□□□□ 0.24
TRIO-218ENST00000512070 GNG11P61952 73 aa16.52■□□□□ 0.24
TRIO-218ENST00000512070 TNPO1Q92973 898 aaKnown RBP16.52■□□□□ 0.24
TRIO-218ENST00000512070 SLC12A5Q9H2X9 1139 aa16.52■□□□□ 0.24
TRIO-218ENST00000512070 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
TRIO-218ENST00000512070 TBCAO75347 108 aaKnown RBP16.52■□□□□ 0.24
TRIO-218ENST00000512070 DUSP27Q5VZP5 1158 aa16.52■□□□□ 0.24
TRIO-218ENST00000512070 CNNM2Q9H8M5 875 aa16.52■□□□□ 0.24
TRIO-218ENST00000512070 USH1CQ9Y6N9 552 aa16.52■□□□□ 0.24
TRIO-218ENST00000512070 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.24
TRIO-218ENST00000512070 ZFYP08048 801 aaPredicted RBP16.52■□□□□ 0.24
TRIO-218ENST00000512070 MAP3K9P80192 1104 aa16.52■□□□□ 0.24
TRIO-218ENST00000512070 MSANTD4Q8NCY6 345 aa16.52■□□□□ 0.24
TRIO-218ENST00000512070 PRPF4BQ13523 1007 aaKnown RBP16.52■□□□□ 0.23
TRIO-218ENST00000512070 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.23
TRIO-218ENST00000512070 IL16Q14005 1332 aa16.52■□□□□ 0.23
TRIO-218ENST00000512070 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 EBAG9O00559 213 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 AKR1B10O60218 316 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 EXOC6BQ9Y2D4 811 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 ATP5DP30049 168 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 GNAQP50148 359 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 GOLGA8AA7E2F4 631 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 ANKIB1Q9P2G1 1089 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 TACC1O75410 805 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 CCDC96Q2M329 555 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 ZGPATQ8N5A5 531 aaKnown RBP16.51■□□□□ 0.23
TRIO-218ENST00000512070 GOLGA1Q92805 767 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 IL1RAPL2Q9NP60 686 aa16.51■□□□□ 0.23
TRIO-218ENST00000512070 BIVM-ERCC5R4GMW8 1640 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 SLU7O95391 586 aaKnown RBP16.5■□□□□ 0.23
TRIO-218ENST00000512070 RBM25P49756 843 aaKnown RBP16.5■□□□□ 0.23
TRIO-218ENST00000512070 ARID4AP29374 1257 aaPredicted RBP16.5■□□□□ 0.23
TRIO-218ENST00000512070 LRSAM1Q6UWE0 723 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 NCOA7Q8NI08 942 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 WDR66Q8TBY9 1149 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 KRT23Q9C075 422 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 N4BP3O15049 544 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 GSTO1P78417 241 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 FERMT3Q86UX7 667 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 TUBB2AQ13885 445 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 TUBB2BQ9BVA1 445 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 UBASH3AP57075 661 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 TCERG1LQ5VWI1 586 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 UTP14AQ9BVJ6 771 aaKnown RBP16.5■□□□□ 0.23
TRIO-218ENST00000512070 SYKP43405 635 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 GTF2A1P52655 376 aaPredicted RBP16.5■□□□□ 0.23
TRIO-218ENST00000512070 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 BICDL2A1A5D9 508 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms