RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 AMER1Q5JTC6 1135 aaPredicted RBP9.7□□□□□ -0.86
HMGCR-211ENST00000512053 STYK1Q6J9G0 422 aa9.7□□□□□ -0.86
HMGCR-211ENST00000512053 MKRN1Q9UHC7 482 aaKnown RBP9.7□□□□□ -0.86
HMGCR-211ENST00000512053 HEG1Q9ULI3 1381 aa9.7□□□□□ -0.86
HMGCR-211ENST00000512053 TJP1Q07157 1748 aa9.7□□□□□ -0.86
HMGCR-211ENST00000512053 BTBD11A6QL63 1104 aa9.69□□□□□ -0.86
HMGCR-211ENST00000512053 POTECB2RU33 542 aa9.69□□□□□ -0.86
HMGCR-211ENST00000512053 BRCA1P38398 1863 aaKnown RBP9.69□□□□□ -0.86
HMGCR-211ENST00000512053 CNGB1Q14028 1251 aaPredicted RBP9.69□□□□□ -0.86
HMGCR-211ENST00000512053 PRPF40BQ6NWY9 871 aaKnown RBP9.69□□□□□ -0.86
HMGCR-211ENST00000512053 NBPF5PQ86XG9 351 aaPredicted RBP9.69□□□□□ -0.86
HMGCR-211ENST00000512053 DZIP3Q86Y13 1208 aaKnown RBP9.69□□□□□ -0.86
HMGCR-211ENST00000512053 CCER1Q8TC90 406 aaPredicted RBP9.69□□□□□ -0.86
HMGCR-211ENST00000512053 LTBP3Q9NS15 1303 aa9.69□□□□□ -0.86
HMGCR-211ENST00000512053 ZNF652Q9Y2D9 606 aa9.69□□□□□ -0.86
HMGCR-211ENST00000512053 MYH14Q7Z406 1995 aaKnown RBP9.68□□□□□ -0.86
HMGCR-211ENST00000512053 MRC1P22897 1456 aa9.68□□□□□ -0.86
HMGCR-211ENST00000512053 A1BGP04217 495 aa9.68□□□□□ -0.86
HMGCR-211ENST00000512053 SRGNP10124 158 aa9.68□□□□□ -0.86
HMGCR-211ENST00000512053 GTF2E1P29083 439 aaPredicted RBP9.68□□□□□ -0.86
HMGCR-211ENST00000512053 CCDC93Q567U6 631 aa9.68□□□□□ -0.86
HMGCR-211ENST00000512053 EAPPQ56P03 285 aaPredicted RBP9.68□□□□□ -0.86
HMGCR-211ENST00000512053 TPTE2Q6XPS3 522 aa9.68□□□□□ -0.86
HMGCR-211ENST00000512053 LDHDQ86WU2 507 aa9.68□□□□□ -0.86
HMGCR-211ENST00000512053 CAMTA2O94983 1202 aa9.67□□□□□ -0.86
HMGCR-211ENST00000512053 CLEC4GQ6UXB4 293 aa9.67□□□□□ -0.86
HMGCR-211ENST00000512053 RTKN2Q8IZC4 609 aa9.67□□□□□ -0.86
HMGCR-211ENST00000512053 IL17REQ8NFR9 667 aa9.67□□□□□ -0.86
HMGCR-211ENST00000512053 RTF1Q92541 710 aaKnown RBP9.67□□□□□ -0.86
HMGCR-211ENST00000512053 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
HMGCR-211ENST00000512053 NUDCQ9Y266 331 aa9.67□□□□□ -0.86
HMGCR-211ENST00000512053 TMEM88BA6NKF7 163 aa9.66□□□□□ -0.86
HMGCR-211ENST00000512053 NPR1P16066 1061 aa9.66□□□□□ -0.86
HMGCR-211ENST00000512053 ALDH1B1P30837 517 aa9.66□□□□□ -0.86
HMGCR-211ENST00000512053 DOK7Q18PE1 504 aa9.66□□□□□ -0.86
HMGCR-211ENST00000512053 PNMA8AQ86V59 439 aaPredicted RBP9.66□□□□□ -0.86
HMGCR-211ENST00000512053 RNF166Q96A37 237 aaPredicted RBP9.66□□□□□ -0.86
HMGCR-211ENST00000512053 HACL1Q9UJ83 578 aa9.66□□□□□ -0.86
HMGCR-211ENST00000512053 ADAMTS7Q9UKP4 1686 aa9.66□□□□□ -0.86
HMGCR-211ENST00000512053 SCN11AQ9UI33 1791 aa9.65□□□□□ -0.86
HMGCR-211ENST00000512053 KIF7Q2M1P5 1343 aa9.65□□□□□ -0.86
HMGCR-211ENST00000512053 GOLGB1Q14789 3259 aaKnown RBP9.65□□□□□ -0.86
HMGCR-211ENST00000512053 SNRPA1P09661 255 aaKnown RBP9.65□□□□□ -0.86
HMGCR-211ENST00000512053 CTCFP49711 727 aaPredicted RBP9.65□□□□□ -0.86
HMGCR-211ENST00000512053 FKBP4Q02790 459 aaKnown RBP eCLIP9.65□□□□□ -0.86
HMGCR-211ENST00000512053 ZNF710Q8N1W2 664 aa9.65□□□□□ -0.86
HMGCR-211ENST00000512053 JDP2Q8WYK2 163 aa9.65□□□□□ -0.86
HMGCR-211ENST00000512053 TAF1DQ9H5J8 278 aaPredicted RBP9.65□□□□□ -0.86
HMGCR-211ENST00000512053 PRDM10Q9NQV6 1147 aa9.65□□□□□ -0.86
HMGCR-211ENST00000512053 USP16Q9Y5T5 823 aa9.65□□□□□ -0.86
HMGCR-211ENST00000512053 CNTNAP1P78357 1384 aa9.64□□□□□ -0.87
HMGCR-211ENST00000512053 FAM177BA6PVY3 158 aa9.64□□□□□ -0.87
HMGCR-211ENST00000512053 FOXN1O15353 648 aa9.64□□□□□ -0.87
HMGCR-211ENST00000512053 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
HMGCR-211ENST00000512053 PRKAR2BP31323 418 aa9.64□□□□□ -0.87
HMGCR-211ENST00000512053 EPHX2P34913 555 aa9.64□□□□□ -0.87
HMGCR-211ENST00000512053 ZNF277Q9NRM2 450 aaPredicted RBP9.64□□□□□ -0.87
HMGCR-211ENST00000512053 NIP7Q9Y221 180 aaKnown RBP eCLIP9.64□□□□□ -0.87
HMGCR-211ENST00000512053 NRXN2Q9P2S2 1712 aa9.64□□□□□ -0.87
HMGCR-211ENST00000512053 KCNQ3O43525 872 aa9.63□□□□□ -0.87
HMGCR-211ENST00000512053 NEFMP07197 916 aa9.63□□□□□ -0.87
HMGCR-211ENST00000512053 LMOD1P29536 600 aaPredicted RBP9.63□□□□□ -0.87
HMGCR-211ENST00000512053 PIP4K2AP48426 406 aaPredicted RBP9.63□□□□□ -0.87
HMGCR-211ENST00000512053 VEGFBP49765 207 aa9.63□□□□□ -0.87
HMGCR-211ENST00000512053 EIF6P56537 245 aaKnown RBP9.63□□□□□ -0.87
HMGCR-211ENST00000512053 DEFB115Q30KQ5 88 aa9.63□□□□□ -0.87
HMGCR-211ENST00000512053 BEGAINQ9BUH8 593 aa9.63□□□□□ -0.87
HMGCR-211ENST00000512053 TMX4Q9H1E5 349 aaPredicted RBP9.63□□□□□ -0.87
HMGCR-211ENST00000512053 PASKQ96RG2 1323 aa9.62□□□□□ -0.87
HMGCR-211ENST00000512053 RGL2O15211 777 aa9.62□□□□□ -0.87
HMGCR-211ENST00000512053 U2AF1L5P0DN76 240 aaPredicted RBP9.62□□□□□ -0.87
HMGCR-211ENST00000512053 IARSP41252 1262 aaKnown RBP9.62□□□□□ -0.87
HMGCR-211ENST00000512053 U2AF1Q01081 240 aaKnown RBP eCLIP9.62□□□□□ -0.87
HMGCR-211ENST00000512053 MAP2K1Q02750 393 aaPredicted RBP9.62□□□□□ -0.87
HMGCR-211ENST00000512053 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
HMGCR-211ENST00000512053 TMEM92Q6UXU6 159 aa9.62□□□□□ -0.87
HMGCR-211ENST00000512053 PAXIP1Q6ZW49 1069 aaPredicted RBP9.62□□□□□ -0.87
HMGCR-211ENST00000512053 CNTROBQ8N137 903 aa9.62□□□□□ -0.87
HMGCR-211ENST00000512053 GPC2Q8N158 579 aa9.62□□□□□ -0.87
HMGCR-211ENST00000512053 SYNE4Q8N205 404 aa9.62□□□□□ -0.87
HMGCR-211ENST00000512053 C7orf43Q8WVR3 580 aa9.62□□□□□ -0.87
HMGCR-211ENST00000512053 NYXQ9GZU5 481 aa9.62□□□□□ -0.87
HMGCR-211ENST00000512053 ABT1Q9ULW3 272 aaKnown RBP9.62□□□□□ -0.87
HMGCR-211ENST00000512053 TIAM2Q8IVF5 1701 aa9.62□□□□□ -0.87
HMGCR-211ENST00000512053 CEMIPQ8WUJ3 1361 aa9.62□□□□□ -0.87
HMGCR-211ENST00000512053 SBF1O95248 1867 aa9.62□□□□□ -0.87
HMGCR-211ENST00000512053 KLRG2A4D1S0 409 aaPredicted RBP9.61□□□□□ -0.87
HMGCR-211ENST00000512053 G3V3G9 751 aa9.61□□□□□ -0.87
HMGCR-211ENST00000512053 ITGBL1O95965 494 aaPredicted RBP9.61□□□□□ -0.87
HMGCR-211ENST00000512053 LBX1P52954 281 aa9.61□□□□□ -0.87
HMGCR-211ENST00000512053 GRIPAP1Q4V328 841 aa9.61□□□□□ -0.87
HMGCR-211ENST00000512053 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
HMGCR-211ENST00000512053 RPGRQ92834 1020 aaKnown RBP9.61□□□□□ -0.87
HMGCR-211ENST00000512053 PHACTR3Q96KR7 559 aa9.61□□□□□ -0.87
HMGCR-211ENST00000512053 AFDNP55196 1824 aaKnown RBP9.61□□□□□ -0.87
HMGCR-211ENST00000512053 DLEC1Q9Y238 1755 aa9.6□□□□□ -0.87
HMGCR-211ENST00000512053 RNF123Q5XPI4 1314 aa9.6□□□□□ -0.87
HMGCR-211ENST00000512053 ZNF541Q9H0D2 1346 aa9.6□□□□□ -0.87
HMGCR-211ENST00000512053 PRAMEF22A3QJZ6 481 aa9.6□□□□□ -0.87
HMGCR-211ENST00000512053 FZD9O00144 591 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms