RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	AAMP	Q13685	434 aa		10.44	□□□□□ -0.74
LINC01088-208	ENST00000511895	TXNDC2	Q86VQ3	553 aa		10.44	□□□□□ -0.74
LINC01088-208	ENST00000511895	AEBP1	Q8IUX7	1158 aa		10.44	□□□□□ -0.74
LINC01088-208	ENST00000511895	RGL4	Q8IZJ4	473 aa		10.44	□□□□□ -0.74
LINC01088-208	ENST00000511895	C2CD2L	O14523	706 aa		10.43	□□□□□ -0.74
LINC01088-208	ENST00000511895	ZBTB39	O15060	712 aa		10.43	□□□□□ -0.74
LINC01088-208	ENST00000511895	MPST	P25325	297 aa		10.43	□□□□□ -0.74
LINC01088-208	ENST00000511895	ZAP70	P43403	619 aa		10.43	□□□□□ -0.74
LINC01088-208	ENST00000511895	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
LINC01088-208	ENST00000511895	SF3B2	Q13435	895 aa	Known RBP	10.43	□□□□□ -0.74
LINC01088-208	ENST00000511895	GRIN2C	Q14957	1233 aa		10.43	□□□□□ -0.74
LINC01088-208	ENST00000511895	HCN2	Q9UL51	889 aa		10.43	□□□□□ -0.74
LINC01088-208	ENST00000511895	USP20	Q9Y2K6	914 aa		10.43	□□□□□ -0.74
LINC01088-208	ENST00000511895		H3BRB1	525 aa		10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	OPLAH	O14841	1288 aa		10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	WIPF1	O43516	503 aa		10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	KCNA1	Q09470	495 aa		10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	SPEM2	Q0P670	501 aa		10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	NOM1	Q5C9Z4	860 aa	Known RBP	10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	FAM182B	Q5T319	152 aa		10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	GLYCTK	Q8IVS8	523 aa		10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	CMTR1	Q8N1G2	835 aa	Known RBP	10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	TUT1	Q9H6E5	874 aa	Known RBP	10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	FAM13B	Q9NYF5	915 aa		10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	EGFL7	Q9UHF1	273 aa		10.42	□□□□□ -0.74
LINC01088-208	ENST00000511895	FAM13A	O94988	1023 aa		10.41	□□□□□ -0.74
LINC01088-208	ENST00000511895	KCNQ4	P56696	695 aa		10.41	□□□□□ -0.74
LINC01088-208	ENST00000511895	RTCB	Q9Y3I0	505 aa	Known RBP	10.41	□□□□□ -0.74
LINC01088-208	ENST00000511895	NEUROD1	Q13562	356 aa		10.4	□□□□□ -0.74
LINC01088-208	ENST00000511895	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.4	□□□□□ -0.74
LINC01088-208	ENST00000511895	ATCAY	Q86WG3	371 aa		10.4	□□□□□ -0.74
LINC01088-208	ENST00000511895	GPR152	Q8TDT2	470 aa		10.4	□□□□□ -0.74
LINC01088-208	ENST00000511895	PIK3R5	Q8WYR1	880 aa		10.4	□□□□□ -0.74
LINC01088-208	ENST00000511895	PNMA5	Q96PV4	448 aa		10.4	□□□□□ -0.74
LINC01088-208	ENST00000511895	SLC30A3	Q99726	388 aa		10.4	□□□□□ -0.74
LINC01088-208	ENST00000511895	IVNS1ABP	Q9Y6Y0	642 aa		10.4	□□□□□ -0.74
LINC01088-208	ENST00000511895	ICMT	O60725	284 aa		10.39	□□□□□ -0.75
LINC01088-208	ENST00000511895	EIF1AX	P47813	144 aa	Known RBP	10.39	□□□□□ -0.75
LINC01088-208	ENST00000511895	ALKBH2	Q6NS38	261 aa		10.39	□□□□□ -0.75
LINC01088-208	ENST00000511895	PATL2	C9JE40	543 aa	Known RBP	10.38	□□□□□ -0.75
LINC01088-208	ENST00000511895	PCBP4	P57723	403 aa	Known RBP	10.38	□□□□□ -0.75
LINC01088-208	ENST00000511895	CCIN	Q13939	588 aa		10.38	□□□□□ -0.75
LINC01088-208	ENST00000511895	BHMT	Q93088	406 aa		10.38	□□□□□ -0.75
LINC01088-208	ENST00000511895	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.38	□□□□□ -0.75
LINC01088-208	ENST00000511895	GNE	Q9Y223	722 aa	Known RBP	10.38	□□□□□ -0.75
LINC01088-208	ENST00000511895	SLURP2	P0DP57	97 aa		10.37	□□□□□ -0.75
LINC01088-208	ENST00000511895	GRN	P28799	593 aa	Known RBP	10.37	□□□□□ -0.75
LINC01088-208	ENST00000511895	INSM1	Q01101	510 aa	Predicted RBP	10.37	□□□□□ -0.75
LINC01088-208	ENST00000511895	DNM1	Q05193	864 aa	Known RBP	10.37	□□□□□ -0.75
LINC01088-208	ENST00000511895	KRT25	Q7Z3Z0	450 aa		10.37	□□□□□ -0.75
LINC01088-208	ENST00000511895	KCTD17	Q8N5Z5	321 aa		10.37	□□□□□ -0.75
LINC01088-208	ENST00000511895	NEURL1B	A8MQ27	555 aa		10.36	□□□□□ -0.75
LINC01088-208	ENST00000511895	ARAF	P10398	606 aa		10.36	□□□□□ -0.75
LINC01088-208	ENST00000511895	ZNF468	Q5VIY5	522 aa	Predicted RBP	10.36	□□□□□ -0.75
LINC01088-208	ENST00000511895	SYT9	Q86SS6	491 aa		10.36	□□□□□ -0.75
LINC01088-208	ENST00000511895	TTC16	Q8NEE8	873 aa		10.36	□□□□□ -0.75
LINC01088-208	ENST00000511895	EDEM1	Q92611	657 aa		10.36	□□□□□ -0.75
LINC01088-208	ENST00000511895	ACD	Q96AP0	544 aa		10.36	□□□□□ -0.75
LINC01088-208	ENST00000511895	GGA1	Q9UJY5	639 aa		10.36	□□□□□ -0.75
LINC01088-208	ENST00000511895	GDF2	Q9UK05	429 aa	Predicted RBP	10.36	□□□□□ -0.75
LINC01088-208	ENST00000511895	XYLB	O75191	536 aa		10.35	□□□□□ -0.75
LINC01088-208	ENST00000511895	PCSK2	P16519	638 aa		10.35	□□□□□ -0.75
LINC01088-208	ENST00000511895	NPR3	P17342	541 aa		10.35	□□□□□ -0.75
LINC01088-208	ENST00000511895	ADH6	P28332	368 aa		10.35	□□□□□ -0.75
LINC01088-208	ENST00000511895	MAP3K10	Q02779	954 aa		10.35	□□□□□ -0.75
LINC01088-208	ENST00000511895	SVOP	Q8N4V2	548 aa		10.35	□□□□□ -0.75
LINC01088-208	ENST00000511895	GOLGA6L1	Q8N7Z2	621 aa		10.35	□□□□□ -0.75
LINC01088-208	ENST00000511895	ZSCAN1	Q8NBB4	408 aa		10.35	□□□□□ -0.75
LINC01088-208	ENST00000511895	GSX2	Q9BZM3	304 aa		10.35	□□□□□ -0.75
LINC01088-208	ENST00000511895	BIN2	Q9UBW5	565 aa	Predicted RBP	10.35	□□□□□ -0.75
LINC01088-208	ENST00000511895	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.35	□□□□□ -0.75
LINC01088-208	ENST00000511895	UBAP1L	F5GYI3	381 aa		10.34	□□□□□ -0.75
LINC01088-208	ENST00000511895	SASH3	O75995	380 aa		10.34	□□□□□ -0.75
LINC01088-208	ENST00000511895	NFKB1	P19838	968 aa		10.34	□□□□□ -0.75
LINC01088-208	ENST00000511895	TBC1D8B	Q0IIM8	1120 aa		10.34	□□□□□ -0.75
LINC01088-208	ENST00000511895	LYPD4	Q6UWN0	246 aa		10.34	□□□□□ -0.75
LINC01088-208	ENST00000511895	NUDT16	Q96DE0	195 aa	Known RBP	10.34	□□□□□ -0.75
LINC01088-208	ENST00000511895	IGFLR1	Q9H665	355 aa		10.34	□□□□□ -0.75
LINC01088-208	ENST00000511895	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.34	□□□□□ -0.75
LINC01088-208	ENST00000511895	KCNMB2	Q9Y691	235 aa		10.34	□□□□□ -0.75
LINC01088-208	ENST00000511895	SOWAHD	A6NJG2	315 aa		10.33	□□□□□ -0.76
LINC01088-208	ENST00000511895	WHAMM	Q8TF30	809 aa		10.33	□□□□□ -0.76
LINC01088-208	ENST00000511895	AVEN	Q9NQS1	362 aa	Predicted RBP	10.33	□□□□□ -0.76
LINC01088-208	ENST00000511895	CELA2B	P08218	269 aa	Predicted RBP	10.32	□□□□□ -0.76
LINC01088-208	ENST00000511895	RARA	P10276	462 aa		10.32	□□□□□ -0.76
LINC01088-208	ENST00000511895	BCR	P11274	1271 aa		10.32	□□□□□ -0.76
LINC01088-208	ENST00000511895	TARS	P26639	723 aa	Known RBP	10.32	□□□□□ -0.76
LINC01088-208	ENST00000511895	MZF1	P28698	734 aa	Predicted RBP	10.32	□□□□□ -0.76
LINC01088-208	ENST00000511895	C8orf34	Q49A92	452 aa		10.32	□□□□□ -0.76
LINC01088-208	ENST00000511895	C11orf16	Q9NQ32	467 aa		10.32	□□□□□ -0.76
LINC01088-208	ENST00000511895	POLI	Q9UNA4	740 aa		10.32	□□□□□ -0.76
LINC01088-208	ENST00000511895	PDGFA	P04085	211 aa		10.31	□□□□□ -0.76
LINC01088-208	ENST00000511895	TRIP4	Q15650	581 aa	Predicted RBP	10.31	□□□□□ -0.76
LINC01088-208	ENST00000511895	ZNF385C	Q66K41	422 aa	Predicted RBP	10.31	□□□□□ -0.76
LINC01088-208	ENST00000511895	SLCO4C1	Q6ZQN7	724 aa		10.31	□□□□□ -0.76
LINC01088-208	ENST00000511895	GALNT6	Q8NCL4	622 aa		10.31	□□□□□ -0.76
LINC01088-208	ENST00000511895	EFCC1	Q9HA90	598 aa		10.31	□□□□□ -0.76
LINC01088-208	ENST00000511895	BRPF3	Q9ULD4	1205 aa		10.31	□□□□□ -0.76
LINC01088-208	ENST00000511895	SIN3B	O75182	1162 aa		10.3	□□□□□ -0.76
LINC01088-208	ENST00000511895	RPLP1	P05386	114 aa	Known RBP	10.3	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms