RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
COPS4-210ENST00000511708 SAGE1Q9NXZ1 904 aa16.3■□□□□ 0.2
COPS4-210ENST00000511708 TEFQ10587 303 aa16.29■□□□□ 0.2
COPS4-210ENST00000511708 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
COPS4-210ENST00000511708 NIP7Q9Y221 180 aaKnown RBP eCLIP16.29■□□□□ 0.2
COPS4-210ENST00000511708 PIP4K2AP48426 406 aaPredicted RBP16.28■□□□□ 0.2
COPS4-210ENST00000511708 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
COPS4-210ENST00000511708 USP16Q9Y5T5 823 aa16.28■□□□□ 0.2
COPS4-210ENST00000511708 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
COPS4-210ENST00000511708 POLR2AP24928 1970 aaKnown RBP16.27■□□□□ 0.2
COPS4-210ENST00000511708 ABCC12Q96J65 1359 aa16.27■□□□□ 0.2
COPS4-210ENST00000511708 FAM155AB1AL88 458 aaPredicted RBP16.27■□□□□ 0.2
COPS4-210ENST00000511708 NIM1KQ8IY84 436 aa16.27■□□□□ 0.2
COPS4-210ENST00000511708 ZC3H15Q8WU90 426 aaKnown RBP16.27■□□□□ 0.2
COPS4-210ENST00000511708 CEMIPQ8WUJ3 1361 aa16.26■□□□□ 0.19
COPS4-210ENST00000511708 NPC1L1Q9UHC9 1359 aa16.26■□□□□ 0.19
COPS4-210ENST00000511708 NUP98P52948 1817 aa16.26■□□□□ 0.19
COPS4-210ENST00000511708 KCNQ3O43525 872 aa16.26■□□□□ 0.19
COPS4-210ENST00000511708 HOXA10P31260 410 aaPredicted RBP16.26■□□□□ 0.19
COPS4-210ENST00000511708 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
COPS4-210ENST00000511708 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
COPS4-210ENST00000511708 ZNF408Q9H9D4 720 aa16.26■□□□□ 0.19
COPS4-210ENST00000511708 CDHR2Q9BYE9 1310 aa16.25■□□□□ 0.19
COPS4-210ENST00000511708 FAM177BA6PVY3 158 aa16.25■□□□□ 0.19
COPS4-210ENST00000511708 HUNKP57058 714 aa16.25■□□□□ 0.19
COPS4-210ENST00000511708 CXCL9Q07325 125 aa16.25■□□□□ 0.19
COPS4-210ENST00000511708 CDC37L1Q7L3B6 337 aa16.25■□□□□ 0.19
COPS4-210ENST00000511708 CTU1Q7Z7A3 348 aaKnown RBP16.25■□□□□ 0.19
COPS4-210ENST00000511708 KIF7Q2M1P5 1343 aa16.24■□□□□ 0.19
COPS4-210ENST00000511708 PRAMEF22A3QJZ6 481 aa16.24■□□□□ 0.19
COPS4-210ENST00000511708 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
COPS4-210ENST00000511708 GMPSP49915 693 aaPredicted RBP16.24■□□□□ 0.19
COPS4-210ENST00000511708 GCC1Q96CN9 775 aa16.24■□□□□ 0.19
COPS4-210ENST00000511708 RNF186Q9NXI6 227 aa16.24■□□□□ 0.19
COPS4-210ENST00000511708 NBPF26B4DH59 902 aa16.23■□□□□ 0.19
COPS4-210ENST00000511708 PPIP5K2O43314 1243 aa16.23■□□□□ 0.19
COPS4-210ENST00000511708 HLFQ16534 295 aa16.23■□□□□ 0.19
COPS4-210ENST00000511708 NBPF10Q6P3W6 841 aaKnown RBP16.23■□□□□ 0.19
COPS4-210ENST00000511708 NBPF15Q8N660 670 aa16.23■□□□□ 0.19
COPS4-210ENST00000511708 VPS33BQ9H267 617 aa16.23■□□□□ 0.19
COPS4-210ENST00000511708 MKI67P46013 3256 aaKnown RBP16.23■□□□□ 0.19
COPS4-210ENST00000511708 TRPA1O75762 1119 aa16.22■□□□□ 0.19
COPS4-210ENST00000511708 KIF23Q02241 960 aaPredicted RBP16.22■□□□□ 0.19
COPS4-210ENST00000511708 AOC3Q16853 763 aa16.22■□□□□ 0.19
COPS4-210ENST00000511708 RGMBQ6NW40 437 aa16.22■□□□□ 0.19
COPS4-210ENST00000511708 TRPM4Q8TD43 1214 aa16.22■□□□□ 0.19
COPS4-210ENST00000511708 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
COPS4-210ENST00000511708 ZNRF3Q9ULT6 936 aa16.22■□□□□ 0.19
COPS4-210ENST00000511708 HPS5Q9UPZ3 1129 aa16.22■□□□□ 0.19
COPS4-210ENST00000511708 GTF2E1P29083 439 aaPredicted RBP16.21■□□□□ 0.19
COPS4-210ENST00000511708 NUTM1Q86Y26 1132 aa16.21■□□□□ 0.19
COPS4-210ENST00000511708 GAS2L2Q8NHY3 880 aa16.21■□□□□ 0.19
COPS4-210ENST00000511708 BTBD11A6QL63 1104 aa16.2■□□□□ 0.18
COPS4-210ENST00000511708 PPEF1O14829 653 aaPredicted RBP16.2■□□□□ 0.18
COPS4-210ENST00000511708 DIAPH1O60610 1272 aaKnown RBP16.2■□□□□ 0.18
COPS4-210ENST00000511708 HABP4Q5JVS0 413 aaKnown RBP16.2■□□□□ 0.18
COPS4-210ENST00000511708 RPGRQ92834 1020 aaKnown RBP16.2■□□□□ 0.18
COPS4-210ENST00000511708 CCDC102AQ96A19 550 aa16.2■□□□□ 0.18
COPS4-210ENST00000511708 NYXQ9GZU5 481 aa16.2■□□□□ 0.18
COPS4-210ENST00000511708 IBTKQ9P2D0 1353 aaPredicted RBP16.19■□□□□ 0.18
COPS4-210ENST00000511708 SNRPA1P09661 255 aaKnown RBP16.19■□□□□ 0.18
COPS4-210ENST00000511708 DLK2Q6UY11 383 aa16.19■□□□□ 0.18
COPS4-210ENST00000511708 USP48Q86UV5 1035 aa16.19■□□□□ 0.18
COPS4-210ENST00000511708 RTFDC1Q9BY42 306 aaPredicted RBP16.19■□□□□ 0.18
COPS4-210ENST00000511708 LAMB4A4D0S4 1761 aa16.18■□□□□ 0.18
COPS4-210ENST00000511708 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
COPS4-210ENST00000511708 CSRNP1Q96S65 589 aa16.18■□□□□ 0.18
COPS4-210ENST00000511708 GBA2Q9HCG7 927 aaPredicted RBP16.18■□□□□ 0.18
COPS4-210ENST00000511708 COL3A1P02461 1466 aaPredicted RBP16.17■□□□□ 0.18
COPS4-210ENST00000511708 SHTN1A0MZ66 631 aa16.17■□□□□ 0.18
COPS4-210ENST00000511708 RBM17Q96I25 401 aaKnown RBP16.17■□□□□ 0.18
COPS4-210ENST00000511708 KNSTRNQ9Y448 316 aa16.17■□□□□ 0.18
COPS4-210ENST00000511708 TCERG1O14776 1098 aaKnown RBP16.16■□□□□ 0.18
COPS4-210ENST00000511708 SLC10A3P09131 477 aa16.16■□□□□ 0.18
COPS4-210ENST00000511708 PKN2Q16513 984 aaKnown RBP16.16■□□□□ 0.18
COPS4-210ENST00000511708 BCL2L13Q9BXK5 485 aa16.16■□□□□ 0.18
COPS4-210ENST00000511708 CNOT7Q9UIV1 285 aaKnown RBP16.16■□□□□ 0.18
COPS4-210ENST00000511708 ATP6V0A2Q9Y487 856 aa16.16■□□□□ 0.18
COPS4-210ENST00000511708 RAD17O75943 681 aa16.15■□□□□ 0.18
COPS4-210ENST00000511708 ZNF157P51786 506 aaPredicted RBP16.15■□□□□ 0.18
COPS4-210ENST00000511708 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
COPS4-210ENST00000511708 TNIP1Q15025 636 aa16.15■□□□□ 0.18
COPS4-210ENST00000511708 C3orf67Q6ZVT6 689 aa16.15■□□□□ 0.18
COPS4-210ENST00000511708 C2orf69Q8N8R5 385 aa16.15■□□□□ 0.18
COPS4-210ENST00000511708 SUPT20HQ8NEM7 779 aa16.15■□□□□ 0.18
COPS4-210ENST00000511708 UBN2Q6ZU65 1347 aa16.15■□□□□ 0.18
COPS4-210ENST00000511708 HTTP42858 3142 aa16.14■□□□□ 0.18
COPS4-210ENST00000511708 ERVV-1B6SEH8 477 aa16.14■□□□□ 0.17
COPS4-210ENST00000511708 LAMB2P55268 1798 aa16.13■□□□□ 0.17
COPS4-210ENST00000511708 YDJCA8MPS7 323 aa16.13■□□□□ 0.17
COPS4-210ENST00000511708 H7C1D1 291 aa16.13■□□□□ 0.17
COPS4-210ENST00000511708 KRT26Q7Z3Y9 468 aa16.13■□□□□ 0.17
COPS4-210ENST00000511708 MICALL2Q8IY33 904 aa16.13■□□□□ 0.17
COPS4-210ENST00000511708 REM2Q8IYK8 340 aaPredicted RBP16.13■□□□□ 0.17
COPS4-210ENST00000511708 ANKRD36CQ5JPF3 1778 aa16.13■□□□□ 0.17
COPS4-210ENST00000511708 NTSR2O95665 410 aa16.12■□□□□ 0.17
COPS4-210ENST00000511708 SUSD4Q5VX71 490 aa16.12■□□□□ 0.17
COPS4-210ENST00000511708 DPF2Q92785 391 aa16.12■□□□□ 0.17
COPS4-210ENST00000511708 MAP3K15Q6ZN16 1313 aa16.12■□□□□ 0.17
COPS4-210ENST00000511708 DUOX1Q9NRD9 1551 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms