RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 TGFBR3LH3BV60 316 aa6.17□□□□□ -1.42
CHD1-207ENST00000511628 C11orf91Q3C1V1 193 aa6.17□□□□□ -1.42
CHD1-207ENST00000511628 C1orf229Q6ZS94 237 aaPredicted RBP6.17□□□□□ -1.42
CHD1-207ENST00000511628 C7orf43Q8WVR3 580 aa6.17□□□□□ -1.42
CHD1-207ENST00000511628 MKNK1Q9BUB5 465 aa6.17□□□□□ -1.42
CHD1-207ENST00000511628 ZMIZ1Q9ULJ6 1067 aa6.17□□□□□ -1.42
CHD1-207ENST00000511628 TMEM164Q5U3C3 297 aa6.16□□□□□ -1.42
CHD1-207ENST00000511628 IER5Q5VY09 327 aa6.16□□□□□ -1.42
CHD1-207ENST00000511628 CHSY3Q70JA7 882 aa6.16□□□□□ -1.42
CHD1-207ENST00000511628 SLC30A3Q99726 388 aa6.16□□□□□ -1.42
CHD1-207ENST00000511628 ELOA3CA0A087WX78 387 aaPredicted RBP6.15□□□□□ -1.42
CHD1-207ENST00000511628 ELOA3DA6NLF2 546 aaPredicted RBP6.15□□□□□ -1.42
CHD1-207ENST00000511628 SIN3BO75182 1162 aa6.15□□□□□ -1.42
CHD1-207ENST00000511628 IDH3AP50213 366 aa6.15□□□□□ -1.42
CHD1-207ENST00000511628 ARSDP51689 593 aa6.15□□□□□ -1.42
CHD1-207ENST00000511628 SNRPNP63162 240 aaKnown RBP6.15□□□□□ -1.42
CHD1-207ENST00000511628 FKBP5Q13451 457 aaPredicted RBP6.15□□□□□ -1.42
CHD1-207ENST00000511628 GRIN2CQ14957 1233 aa6.15□□□□□ -1.42
CHD1-207ENST00000511628 ELOA3BQ3SY89 546 aa6.15□□□□□ -1.42
CHD1-207ENST00000511628 FCHSD1Q86WN1 690 aa6.15□□□□□ -1.42
CHD1-207ENST00000511628 KCTD17Q8N5Z5 321 aa6.15□□□□□ -1.42
CHD1-207ENST00000511628 ELOA3Q8NG57 546 aa6.15□□□□□ -1.42
CHD1-207ENST00000511628 IFT43Q96FT9 208 aa6.15□□□□□ -1.42
CHD1-207ENST00000511628 UBE2OQ9C0C9 1292 aaKnown RBP6.15□□□□□ -1.42
CHD1-207ENST00000511628 GNB5O14775 395 aa6.14□□□□□ -1.43
CHD1-207ENST00000511628 MICAL2O94851 1124 aa6.14□□□□□ -1.43
CHD1-207ENST00000511628 KCNQ4P56696 695 aa6.14□□□□□ -1.43
CHD1-207ENST00000511628 CCINQ13939 588 aa6.14□□□□□ -1.43
CHD1-207ENST00000511628 ARID3AQ99856 593 aa6.14□□□□□ -1.43
CHD1-207ENST00000511628 QTRT2Q9H974 415 aaKnown RBP6.14□□□□□ -1.43
CHD1-207ENST00000511628 NOP53Q9NZM5 478 aaKnown RBP6.14□□□□□ -1.43
CHD1-207ENST00000511628 PTCD1O75127 700 aaKnown RBP6.13□□□□□ -1.43
CHD1-207ENST00000511628 PPP1R15AO75807 674 aaPredicted RBP6.13□□□□□ -1.43
CHD1-207ENST00000511628 ATP2B4P23634 1241 aa6.13□□□□□ -1.43
CHD1-207ENST00000511628 ARID4AP29374 1257 aaPredicted RBP6.13□□□□□ -1.43
CHD1-207ENST00000511628 ADH7P40394 386 aa6.13□□□□□ -1.43
CHD1-207ENST00000511628 SRPK2P78362 688 aaKnown RBP6.13□□□□□ -1.43
CHD1-207ENST00000511628 NAA30Q147X3 362 aaPredicted RBP6.13□□□□□ -1.43
CHD1-207ENST00000511628 C16orf46Q6P387 395 aa6.13□□□□□ -1.43
CHD1-207ENST00000511628 KRT25Q7Z3Z0 450 aa6.13□□□□□ -1.43
CHD1-207ENST00000511628 CMTR1Q8N1G2 835 aaKnown RBP6.13□□□□□ -1.43
CHD1-207ENST00000511628 MYO19Q96H55 970 aa6.13□□□□□ -1.43
CHD1-207ENST00000511628 CXXC1Q9P0U4 656 aaPredicted RBP6.13□□□□□ -1.43
CHD1-207ENST00000511628 KLF15Q9UIH9 416 aa6.13□□□□□ -1.43
CHD1-207ENST00000511628 HCN2Q9UL51 889 aa6.13□□□□□ -1.43
CHD1-207ENST00000511628 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.13□□□□□ -1.43
CHD1-207ENST00000511628 SPDYE3A6NKU9 549 aa6.12□□□□□ -1.43
CHD1-207ENST00000511628 NFKB1P19838 968 aa6.12□□□□□ -1.43
CHD1-207ENST00000511628 BRD2P25440 801 aaKnown RBP6.12□□□□□ -1.43
CHD1-207ENST00000511628 GPAT2Q6NUI2 795 aa6.12□□□□□ -1.43
CHD1-207ENST00000511628 TREML1Q86YW5 311 aa6.12□□□□□ -1.43
CHD1-207ENST00000511628 RGL4Q8IZJ4 473 aa6.12□□□□□ -1.43
CHD1-207ENST00000511628 CLP1Q92989 425 aaKnown RBP6.12□□□□□ -1.43
CHD1-207ENST00000511628 EFCC1Q9HA90 598 aa6.12□□□□□ -1.43
CHD1-207ENST00000511628 FAM69CQ0P6D2 419 aa6.11□□□□□ -1.43
CHD1-207ENST00000511628 PCSK7Q16549 785 aa6.11□□□□□ -1.43
CHD1-207ENST00000511628 OCLNQ16625 522 aa6.11□□□□□ -1.43
CHD1-207ENST00000511628 COX20Q5RI15 118 aa6.11□□□□□ -1.43
CHD1-207ENST00000511628 FAM13BQ9NYF5 915 aa6.11□□□□□ -1.43
CHD1-207ENST00000511628 BCS1LQ9Y276 419 aa6.11□□□□□ -1.43
CHD1-207ENST00000511628 ADARB2-AS1A8MUL3 147 aa6.1□□□□□ -1.43
CHD1-207ENST00000511628 M0R082 166 aa6.1□□□□□ -1.43
CHD1-207ENST00000511628 RARAP10276 462 aa6.1□□□□□ -1.43
CHD1-207ENST00000511628 INPP5BP32019 993 aa6.1□□□□□ -1.43
CHD1-207ENST00000511628 ALYREFQ86V81 257 aaKnown RBP6.1□□□□□ -1.43
CHD1-207ENST00000511628 HOMEZQ8IX15 550 aa6.1□□□□□ -1.43
CHD1-207ENST00000511628 ZNF417Q8TAU3 575 aa6.1□□□□□ -1.43
CHD1-207ENST00000511628 TNFRSF25Q93038 417 aa6.1□□□□□ -1.43
CHD1-207ENST00000511628 COL26A1Q96A83 441 aa6.1□□□□□ -1.43
CHD1-207ENST00000511628 DCAF5Q96JK2 942 aa6.1□□□□□ -1.43
CHD1-207ENST00000511628 ZNF587Q96SQ5 575 aaPredicted RBP6.1□□□□□ -1.43
CHD1-207ENST00000511628 GSX2Q9BZM3 304 aa6.1□□□□□ -1.43
CHD1-207ENST00000511628 LRFN2Q9ULH4 789 aa6.1□□□□□ -1.43
CHD1-207ENST00000511628 RTCBQ9Y3I0 505 aaKnown RBP6.1□□□□□ -1.43
CHD1-207ENST00000511628 SASH3O75995 380 aa6.09□□□□□ -1.43
CHD1-207ENST00000511628 DGKGP49619 791 aa6.09□□□□□ -1.43
CHD1-207ENST00000511628 PRRT3Q5FWE3 981 aa6.09□□□□□ -1.43
CHD1-207ENST00000511628 TTC16Q8NEE8 873 aa6.09□□□□□ -1.43
CHD1-207ENST00000511628 PIK3R5Q8WYR1 880 aa6.09□□□□□ -1.43
CHD1-207ENST00000511628 DNAJB12Q9NXW2 375 aaKnown RBP6.09□□□□□ -1.43
CHD1-207ENST00000511628 DMGDHQ9UI17 866 aaKnown RBP6.09□□□□□ -1.43
CHD1-207ENST00000511628 MTMR7Q9Y216 660 aa6.09□□□□□ -1.43
CHD1-207ENST00000511628 USP20Q9Y2K6 914 aa6.09□□□□□ -1.43
CHD1-207ENST00000511628 LILRB5O75023 590 aa6.08□□□□□ -1.44
CHD1-207ENST00000511628 XYLBO75191 536 aa6.08□□□□□ -1.44
CHD1-207ENST00000511628 LINC00114Q6XXX2 140 aa6.08□□□□□ -1.44
CHD1-207ENST00000511628 ABTB2Q8N961 1025 aa6.08□□□□□ -1.44
CHD1-207ENST00000511628 PLVAPQ9BX97 442 aa6.08□□□□□ -1.44
CHD1-207ENST00000511628 SAP130Q9H0E3 1048 aa6.08□□□□□ -1.44
CHD1-207ENST00000511628 JPH1Q9HDC5 661 aaPredicted RBP6.08□□□□□ -1.44
CHD1-207ENST00000511628 SLC6A14Q9UN76 642 aa6.08□□□□□ -1.44
CHD1-207ENST00000511628 RGS9O75916 674 aaPredicted RBP6.07□□□□□ -1.44
CHD1-207ENST00000511628 IGHA1P01876 353 aa6.07□□□□□ -1.44
CHD1-207ENST00000511628 PSAPP07602 524 aa6.07□□□□□ -1.44
CHD1-207ENST00000511628 TARSP26639 723 aaKnown RBP6.07□□□□□ -1.44
CHD1-207ENST00000511628 GSK3AP49840 483 aa6.07□□□□□ -1.44
CHD1-207ENST00000511628 AAMPQ13685 434 aa6.07□□□□□ -1.44
CHD1-207ENST00000511628 TRAPPC3LQ5T215 181 aa6.07□□□□□ -1.44
CHD1-207ENST00000511628 CAPN12Q6ZSI9 719 aa6.07□□□□□ -1.44
CHD1-207ENST00000511628 FAM35AQ86V20 835 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms