RNA–Protein interactions for RNA: ENST00000511298.1

CDS1-202, Transcript of CDP-diacylglycerol synthase 1, humanhuman

TSL 5

Gene CDS1, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-202ENST00000511298 RIC1Q4ADV7 1423 aa28.1■■■□□ 2.09
CDS1-202ENST00000511298 TCERG1O14776 1098 aaKnown RBP28.1■■■□□ 2.09
CDS1-202ENST00000511298 RIC3Q7Z5B4 369 aa28.1■■■□□ 2.09
CDS1-202ENST00000511298 SLC4A2P04920 1241 aa28.09■■■□□ 2.09
CDS1-202ENST00000511298 ATP5J2-PTCD1G3V325 749 aa28.07■■■□□ 2.08
CDS1-202ENST00000511298 PRPF40BQ6NWY9 871 aaKnown RBP28.07■■■□□ 2.08
CDS1-202ENST00000511298 C7orf43Q8WVR3 580 aa28.07■■■□□ 2.08
CDS1-202ENST00000511298 TRMT112Q9UI30 125 aaKnown RBP28.07■■■□□ 2.08
CDS1-202ENST00000511298 C21orf2O43822 256 aa28.06■■■□□ 2.08
CDS1-202ENST00000511298 DDX58O95786 925 aaKnown RBP28.06■■■□□ 2.08
CDS1-202ENST00000511298 HOXA10P31260 410 aaPredicted RBP28.06■■■□□ 2.08
CDS1-202ENST00000511298 G2E3Q7L622 706 aa28.06■■■□□ 2.08
CDS1-202ENST00000511298 SYNE4Q8N205 404 aa28.06■■■□□ 2.08
CDS1-202ENST00000511298 ADCY9O60503 1353 aa28.06■■■□□ 2.08
CDS1-202ENST00000511298 CHD4Q14839 1912 aa28.05■■■□□ 2.08
CDS1-202ENST00000511298 KSR2Q6VAB6 950 aa28.05■■■□□ 2.08
CDS1-202ENST00000511298 C3orf67Q6ZVT6 689 aa28.05■■■□□ 2.08
CDS1-202ENST00000511298 DLEC1Q9Y238 1755 aa28.05■■■□□ 2.08
CDS1-202ENST00000511298 SH3TC1Q8TE82 1336 aa28.04■■■□□ 2.08
CDS1-202ENST00000511298 E9PSI1 815 aa28.04■■■□□ 2.08
CDS1-202ENST00000511298 ALDH1B1P30837 517 aa28.04■■■□□ 2.08
CDS1-202ENST00000511298 SLFN5Q08AF3 891 aa28.04■■■□□ 2.08
CDS1-202ENST00000511298 NLRP3Q96P20 1036 aa28.04■■■□□ 2.08
CDS1-202ENST00000511298 METTL22Q9BUU2 404 aaPredicted RBP28.04■■■□□ 2.08
CDS1-202ENST00000511298 ZNF219Q9P2Y4 722 aaPredicted RBP28.03■■■□□ 2.08
CDS1-202ENST00000511298 ARFGEF1Q9Y6D6 1849 aa28.03■■■□□ 2.08
CDS1-202ENST00000511298 COL11A2P13942 1736 aaPredicted RBP28.03■■■□□ 2.08
CDS1-202ENST00000511298 PI4KAP2A4QPH2 592 aa28.02■■■□□ 2.08
CDS1-202ENST00000511298 NFKBIEO00221 500 aa28.02■■■□□ 2.08
CDS1-202ENST00000511298 C9orf131Q5VYM1 1079 aa28.02■■■□□ 2.08
CDS1-202ENST00000511298 PI4KAP1Q8N8J0 262 aa28.02■■■□□ 2.08
CDS1-202ENST00000511298 MYD88Q99836 296 aa28.02■■■□□ 2.08
CDS1-202ENST00000511298 MAP3K2Q9Y2U5 619 aa28.02■■■□□ 2.08
CDS1-202ENST00000511298 HCLS1P14317 486 aaPredicted RBP28.01■■■□□ 2.07
CDS1-202ENST00000511298 CRAMP1Q96RY5 1269 aa28.01■■■□□ 2.07
CDS1-202ENST00000511298 PRELPP51888 382 aa28■■■□□ 2.07
CDS1-202ENST00000511298 RASSF7Q02833 373 aa28■■■□□ 2.07
CDS1-202ENST00000511298 FLIIQ13045 1269 aa28■■■□□ 2.07
CDS1-202ENST00000511298 SOGA3Q5TF21 947 aa28■■■□□ 2.07
CDS1-202ENST00000511298 TRMT2AQ8IZ69 625 aaKnown RBP28■■■□□ 2.07
CDS1-202ENST00000511298 CCDC191Q8NCU4 936 aa28■■■□□ 2.07
CDS1-202ENST00000511298 RPGRQ92834 1020 aaKnown RBP28■■■□□ 2.07
CDS1-202ENST00000511298 ZNF428Q96B54 188 aa28■■■□□ 2.07
CDS1-202ENST00000511298 FAM89AQ96GI7 184 aa28■■■□□ 2.07
CDS1-202ENST00000511298 CDCA7LQ96GN5 454 aa27.99■■■□□ 2.07
CDS1-202ENST00000511298 RBM17Q96I25 401 aaKnown RBP27.99■■■□□ 2.07
CDS1-202ENST00000511298 TNRC6CQ9HCJ0 1690 aaKnown RBP27.97■■■□□ 2.07
CDS1-202ENST00000511298 ZBTB38Q8NAP3 1195 aaPredicted RBP27.97■■■□□ 2.07
CDS1-202ENST00000511298 RNF181Q9P0P0 153 aa27.97■■■□□ 2.07
CDS1-202ENST00000511298 LTBP3Q9NS15 1303 aa27.96■■■□□ 2.07
CDS1-202ENST00000511298 IGKV5-2P06315 115 aa27.96■■■□□ 2.07
CDS1-202ENST00000511298 LMNB1P20700 586 aa27.96■■■□□ 2.07
CDS1-202ENST00000511298 CWC25Q9NXE8 425 aaPredicted RBP27.95■■■□□ 2.06
CDS1-202ENST00000511298 PCCAP05165 728 aaPredicted RBP27.94■■■□□ 2.06
CDS1-202ENST00000511298 CCDC93Q567U6 631 aa27.94■■■□□ 2.06
CDS1-202ENST00000511298 SLX4Q8IY92 1834 aa27.94■■■□□ 2.06
CDS1-202ENST00000511298 ANKRD36CQ5JPF3 1778 aa27.94■■■□□ 2.06
CDS1-202ENST00000511298 FKBP5Q13451 457 aaPredicted RBP27.93■■■□□ 2.06
CDS1-202ENST00000511298 SF3B3Q15393 1217 aaKnown RBP27.93■■■□□ 2.06
CDS1-202ENST00000511298 OLFM4Q6UX06 510 aa27.93■■■□□ 2.06
CDS1-202ENST00000511298 IRS4O14654 1257 aaPredicted RBP27.92■■■□□ 2.06
CDS1-202ENST00000511298 NEXNQ0ZGT2 675 aa27.92■■■□□ 2.06
CDS1-202ENST00000511298 RTL5Q5HYW3 569 aaPredicted RBP27.92■■■□□ 2.06
CDS1-202ENST00000511298 TAOK3Q9H2K8 898 aa27.92■■■□□ 2.06
CDS1-202ENST00000511298 CC2D2BQ6DHV5 1058 aa27.91■■■□□ 2.06
CDS1-202ENST00000511298 RTKN2Q8IZC4 609 aa27.91■■■□□ 2.06
CDS1-202ENST00000511298 DNAAF4Q8WXU2 420 aa27.91■■■□□ 2.06
CDS1-202ENST00000511298 NEURL1BA8MQ27 555 aa27.9■■■□□ 2.06
CDS1-202ENST00000511298 ARFGEF2Q9Y6D5 1785 aa27.9■■■□□ 2.06
CDS1-202ENST00000511298 ABCC4O15439 1325 aa27.9■■■□□ 2.06
CDS1-202ENST00000511298 BBOX1O75936 387 aa27.89■■■□□ 2.06
CDS1-202ENST00000511298 CWF19L2Q2TBE0 894 aaKnown RBP27.89■■■□□ 2.06
CDS1-202ENST00000511298 PPEF1O14829 653 aaPredicted RBP27.88■■■□□ 2.05
CDS1-202ENST00000511298 HSP90B1P14625 803 aaKnown RBP27.88■■■□□ 2.05
CDS1-202ENST00000511298 FKBP4Q02790 459 aaKnown RBP eCLIP27.88■■■□□ 2.05
CDS1-202ENST00000511298 DDX46Q7L014 1031 aaKnown RBP27.88■■■□□ 2.05
CDS1-202ENST00000511298 SNED1Q8TER0 1413 aa27.88■■■□□ 2.05
CDS1-202ENST00000511298 JARID2Q92833 1246 aaPredicted RBP27.88■■■□□ 2.05
CDS1-202ENST00000511298 GPBP1L1Q9HC44 474 aaPredicted RBP27.88■■■□□ 2.05
CDS1-202ENST00000511298 ZC3H4Q9UPT8 1303 aaKnown RBP27.88■■■□□ 2.05
CDS1-202ENST00000511298 GRIPAP1Q4V328 841 aa27.87■■■□□ 2.05
CDS1-202ENST00000511298 MRPL50Q8N5N7 158 aaKnown RBP27.87■■■□□ 2.05
CDS1-202ENST00000511298 LINS1Q8NG48 757 aa27.87■■■□□ 2.05
CDS1-202ENST00000511298 ZNF526Q8TF50 670 aaPredicted RBP27.87■■■□□ 2.05
CDS1-202ENST00000511298 ATP6V0A2Q9Y487 856 aa27.87■■■□□ 2.05
CDS1-202ENST00000511298 H7C1W4 665 aa27.86■■■□□ 2.05
CDS1-202ENST00000511298 GRAPQ13588 217 aa27.86■■■□□ 2.05
CDS1-202ENST00000511298 GRAPLQ8TC17 118 aaPredicted RBP27.86■■■□□ 2.05
CDS1-202ENST00000511298 CDHR2Q9BYE9 1310 aa27.86■■■□□ 2.05
CDS1-202ENST00000511298 F6X3S4 739 aa27.85■■■□□ 2.05
CDS1-202ENST00000511298 PDE8AO60658 829 aa27.85■■■□□ 2.05
CDS1-202ENST00000511298 GCKRQ14397 625 aa27.85■■■□□ 2.05
CDS1-202ENST00000511298 SLC51AQ86UW1 340 aa27.85■■■□□ 2.05
CDS1-202ENST00000511298 PSMD1Q99460 953 aa27.85■■■□□ 2.05
CDS1-202ENST00000511298 BEND3Q5T5X7 828 aa27.84■■■□□ 2.05
CDS1-202ENST00000511298 SP8Q8IXZ3 490 aa27.84■■■□□ 2.05
CDS1-202ENST00000511298 SSH1Q8WYL5 1049 aa27.84■■■□□ 2.05
CDS1-202ENST00000511298 CT47B1P0C2W7 299 aaPredicted RBP27.83■■■□□ 2.05
CDS1-202ENST00000511298 ZNF277Q9NRM2 450 aaPredicted RBP27.82■■■□□ 2.04
CDS1-202ENST00000511298 ALDH1L2Q3SY69 923 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms