RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 CAMTA2O94983 1202 aa20.88■□□□□ 0.93
SCAMP1-203ENST00000510030 TRAPPC3LQ5T215 181 aa20.88■□□□□ 0.93
SCAMP1-203ENST00000510030 CEP85Q6P2H3 762 aa20.88■□□□□ 0.93
SCAMP1-203ENST00000510030 LRRC4BQ9NT99 713 aa20.88■□□□□ 0.93
SCAMP1-203ENST00000510030 ATF5Q9Y2D1 282 aaPredicted RBP20.88■□□□□ 0.93
SCAMP1-203ENST00000510030 C4AP0C0L4 1744 aa20.87■□□□□ 0.93
SCAMP1-203ENST00000510030 LRRFIP2Q9Y608 721 aaKnown RBP20.87■□□□□ 0.93
SCAMP1-203ENST00000510030 ATP5J2-PTCD1G3V325 749 aa20.86■□□□□ 0.93
SCAMP1-203ENST00000510030 NBPF7P0C2Y1 421 aaPredicted RBP20.86■□□□□ 0.93
SCAMP1-203ENST00000510030 RFC4P35249 363 aa20.86■□□□□ 0.93
SCAMP1-203ENST00000510030 KCNQ4P56696 695 aa20.86■□□□□ 0.93
SCAMP1-203ENST00000510030 MTX1Q13505 466 aa20.86■□□□□ 0.93
SCAMP1-203ENST00000510030 C1orf115Q9H7X2 142 aa20.86■□□□□ 0.93
SCAMP1-203ENST00000510030 PCCAP05165 728 aaPredicted RBP20.85■□□□□ 0.93
SCAMP1-203ENST00000510030 ZNF34Q8IZ26 560 aa20.85■□□□□ 0.93
SCAMP1-203ENST00000510030 H7C1W4 665 aa20.84■□□□□ 0.93
SCAMP1-203ENST00000510030 ATP8B2P98198 1209 aa20.84■□□□□ 0.93
SCAMP1-203ENST00000510030 UBE3BQ7Z3V4 1068 aa20.84■□□□□ 0.93
SCAMP1-203ENST00000510030 PPP1R42Q7Z4L9 355 aa20.84■□□□□ 0.93
SCAMP1-203ENST00000510030 ZBTB38Q8NAP3 1195 aaPredicted RBP20.84■□□□□ 0.93
SCAMP1-203ENST00000510030 CDHR2Q9BYE9 1310 aa20.83■□□□□ 0.93
SCAMP1-203ENST00000510030 USP42Q9H9J4 1324 aaKnown RBP20.83■□□□□ 0.93
SCAMP1-203ENST00000510030 PTGER2P43116 358 aa20.83■□□□□ 0.93
SCAMP1-203ENST00000510030 SLC15A2Q16348 729 aa20.83■□□□□ 0.93
SCAMP1-203ENST00000510030 HLFQ16534 295 aa20.83■□□□□ 0.93
SCAMP1-203ENST00000510030 ZNF827Q17R98 1081 aa20.83■□□□□ 0.93
SCAMP1-203ENST00000510030 NLRP10Q86W26 655 aa20.83■□□□□ 0.93
SCAMP1-203ENST00000510030 SMC5Q8IY18 1101 aa20.83■□□□□ 0.93
SCAMP1-203ENST00000510030 STK32BQ9NY57 414 aa20.83■□□□□ 0.93
SCAMP1-203ENST00000510030 ZBTB47Q9UFB7 747 aaPredicted RBP20.83■□□□□ 0.93
SCAMP1-203ENST00000510030 HSP90AB4PQ58FF6 505 aa20.82■□□□□ 0.92
SCAMP1-203ENST00000510030 QSER1Q2KHR3 1735 aa20.81■□□□□ 0.92
SCAMP1-203ENST00000510030 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.81■□□□□ 0.92
SCAMP1-203ENST00000510030 IGHDP01880 384 aa20.81■□□□□ 0.92
SCAMP1-203ENST00000510030 ARHGEF1Q92888 912 aaKnown RBP20.81■□□□□ 0.92
SCAMP1-203ENST00000510030 NYXQ9GZU5 481 aa20.81■□□□□ 0.92
SCAMP1-203ENST00000510030 NIP7Q9Y221 180 aaKnown RBP eCLIP20.81■□□□□ 0.92
SCAMP1-203ENST00000510030 SSH3Q8TE77 659 aa20.8■□□□□ 0.92
SCAMP1-203ENST00000510030 TFCP2L1Q9NZI6 479 aa20.8■□□□□ 0.92
SCAMP1-203ENST00000510030 TRMT112Q9UI30 125 aaKnown RBP20.8■□□□□ 0.92
SCAMP1-203ENST00000510030 COL24A1Q17RW2 1714 aa20.8■□□□□ 0.92
SCAMP1-203ENST00000510030 LAMB2P55268 1798 aa20.8■□□□□ 0.92
SCAMP1-203ENST00000510030 SRGAP3O43295 1099 aa20.79■□□□□ 0.92
SCAMP1-203ENST00000510030 GPTP24298 496 aa20.79■□□□□ 0.92
SCAMP1-203ENST00000510030 RABL6Q3YEC7 729 aaPredicted RBP20.79■□□□□ 0.92
SCAMP1-203ENST00000510030 SIRT2Q8IXJ6 389 aa20.79■□□□□ 0.92
SCAMP1-203ENST00000510030 AKT1S1Q96B36 256 aa20.79■□□□□ 0.92
SCAMP1-203ENST00000510030 UTP14AQ9BVJ6 771 aaKnown RBP20.79■□□□□ 0.92
SCAMP1-203ENST00000510030 PLA2G12BQ9BX93 195 aa20.79■□□□□ 0.92
SCAMP1-203ENST00000510030 DCTPP1Q9H773 170 aa20.79■□□□□ 0.92
SCAMP1-203ENST00000510030 SH3TC1Q8TE82 1336 aa20.78■□□□□ 0.92
SCAMP1-203ENST00000510030 MYH3P11055 1940 aa20.78■□□□□ 0.92
SCAMP1-203ENST00000510030 PHF14O94880 888 aa20.78■□□□□ 0.92
SCAMP1-203ENST00000510030 CASP7P55210 303 aa20.78■□□□□ 0.92
SCAMP1-203ENST00000510030 USPL1Q5W0Q7 1092 aa20.78■□□□□ 0.92
SCAMP1-203ENST00000510030 SUCLG2Q96I99 432 aa20.78■□□□□ 0.92
SCAMP1-203ENST00000510030 SETDB2Q96T68 719 aa20.78■□□□□ 0.92
SCAMP1-203ENST00000510030 BICC1Q9H694 974 aaKnown RBP20.78■□□□□ 0.92
SCAMP1-203ENST00000510030 CARMIL3Q8ND23 1372 aa20.77■□□□□ 0.92
SCAMP1-203ENST00000510030 POLA2Q14181 598 aa20.77■□□□□ 0.92
SCAMP1-203ENST00000510030 UBN2Q6ZU65 1347 aa20.77■□□□□ 0.91
SCAMP1-203ENST00000510030 YY1P25490 414 aa20.76■□□□□ 0.91
SCAMP1-203ENST00000510030 RAB11FIP3O75154 756 aa20.75■□□□□ 0.91
SCAMP1-203ENST00000510030 ERC1Q8IUD2 1116 aa20.75■□□□□ 0.91
SCAMP1-203ENST00000510030 TUBGCP6Q96RT7 1819 aa20.74■□□□□ 0.91
SCAMP1-203ENST00000510030 PDE8AO60658 829 aa20.74■□□□□ 0.91
SCAMP1-203ENST00000510030 FHDC1Q9C0D6 1143 aaPredicted RBP20.74■□□□□ 0.91
SCAMP1-203ENST00000510030 PNMA6EA0A0J9YXQ4 647 aa20.73■□□□□ 0.91
SCAMP1-203ENST00000510030 IRS4O14654 1257 aaPredicted RBP20.73■□□□□ 0.91
SCAMP1-203ENST00000510030 NUCB1Q02818 461 aa20.73■□□□□ 0.91
SCAMP1-203ENST00000510030 TPTE2Q6XPS3 522 aa20.73■□□□□ 0.91
SCAMP1-203ENST00000510030 NLGN1Q8N2Q7 840 aa20.73■□□□□ 0.91
SCAMP1-203ENST00000510030 FAM89AQ96GI7 184 aa20.73■□□□□ 0.91
SCAMP1-203ENST00000510030 KAZALD1Q96I82 304 aa20.73■□□□□ 0.91
SCAMP1-203ENST00000510030 SGIP1Q9BQI5 828 aa20.73■□□□□ 0.91
SCAMP1-203ENST00000510030 UTRNP46939 3433 aa20.72■□□□□ 0.91
SCAMP1-203ENST00000510030 NTSR2O95665 410 aa20.72■□□□□ 0.91
SCAMP1-203ENST00000510030 GTF2E1P29083 439 aaPredicted RBP20.72■□□□□ 0.91
SCAMP1-203ENST00000510030 SUSD4Q5VX71 490 aa20.72■□□□□ 0.91
SCAMP1-203ENST00000510030 BCL2L12Q9HB09 334 aa20.72■□□□□ 0.91
SCAMP1-203ENST00000510030 SRP68Q9UHB9 627 aaKnown RBP20.72■□□□□ 0.91
SCAMP1-203ENST00000510030 FBXO3Q9UK99 471 aa20.72■□□□□ 0.91
SCAMP1-203ENST00000510030 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
SCAMP1-203ENST00000510030 FOXO4P98177 505 aa20.71■□□□□ 0.91
SCAMP1-203ENST00000510030 TBC1D9BQ66K14 1250 aa20.71■□□□□ 0.91
SCAMP1-203ENST00000510030 LMBR1LQ6UX01 489 aa20.71■□□□□ 0.91
SCAMP1-203ENST00000510030 CHD1LQ86WJ1 897 aa20.71■□□□□ 0.91
SCAMP1-203ENST00000510030 NBPF5PQ86XG9 351 aaPredicted RBP20.71■□□□□ 0.91
SCAMP1-203ENST00000510030 RIC1Q4ADV7 1423 aa20.7■□□□□ 0.9
SCAMP1-203ENST00000510030 NPHP1O15259 732 aa20.7■□□□□ 0.9
SCAMP1-203ENST00000510030 SURF6O75683 361 aaKnown RBP20.7■□□□□ 0.9
SCAMP1-203ENST00000510030 GYS1P13807 737 aa20.7■□□□□ 0.9
SCAMP1-203ENST00000510030 CTSWP56202 376 aa20.7■□□□□ 0.9
SCAMP1-203ENST00000510030 CCDC57Q2TAC2 916 aa20.7■□□□□ 0.9
SCAMP1-203ENST00000510030 LRRCC1Q9C099 1032 aa20.7■□□□□ 0.9
SCAMP1-203ENST00000510030 MTFR1LQ9H019 292 aa20.7■□□□□ 0.9
SCAMP1-203ENST00000510030 COPRSQ9NQ92 184 aa20.7■□□□□ 0.9
SCAMP1-203ENST00000510030 CSF1RP07333 972 aa20.69■□□□□ 0.9
SCAMP1-203ENST00000510030 OS9Q13438 667 aaPredicted RBP20.69■□□□□ 0.9
SCAMP1-203ENST00000510030 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms