RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 ZNF652Q9Y2D9 606 aa18.65■□□□□ 0.58
HMGCR-208ENST00000509431 RGMBQ6NW40 437 aa18.64■□□□□ 0.57
HMGCR-208ENST00000509431 DZIP3Q86Y13 1208 aaKnown RBP18.64■□□□□ 0.57
HMGCR-208ENST00000509431 NIM1KQ8IY84 436 aa18.64■□□□□ 0.57
HMGCR-208ENST00000509431 HEG1Q9ULI3 1381 aa18.64■□□□□ 0.57
HMGCR-208ENST00000509431 FAM155AB1AL88 458 aaPredicted RBP18.63■□□□□ 0.57
HMGCR-208ENST00000509431 FXR1P51114 621 aaKnown RBP eCLIP18.63■□□□□ 0.57
HMGCR-208ENST00000509431 CDHR2Q9BYE9 1310 aa18.63■□□□□ 0.57
HMGCR-208ENST00000509431 KIF23Q02241 960 aaPredicted RBP18.62■□□□□ 0.57
HMGCR-208ENST00000509431 REM2Q8IYK8 340 aaPredicted RBP18.62■□□□□ 0.57
HMGCR-208ENST00000509431 RGL2O15211 777 aa18.61■□□□□ 0.57
HMGCR-208ENST00000509431 ZNF496Q96IT1 587 aaPredicted RBP18.61■□□□□ 0.57
HMGCR-208ENST00000509431 VPS33BQ9H267 617 aa18.6■□□□□ 0.57
HMGCR-208ENST00000509431 A1BGP04217 495 aa18.59■□□□□ 0.57
HMGCR-208ENST00000509431 NPC1L1Q9UHC9 1359 aa18.58■□□□□ 0.57
HMGCR-208ENST00000509431 CRY2Q49AN0 593 aa18.58■□□□□ 0.56
HMGCR-208ENST00000509431 ZNF790Q6PG37 636 aa18.58■□□□□ 0.56
HMGCR-208ENST00000509431 C2orf69Q8N8R5 385 aa18.58■□□□□ 0.56
HMGCR-208ENST00000509431 GMPSP49915 693 aaPredicted RBP18.57■□□□□ 0.56
HMGCR-208ENST00000509431 ZNF157P51786 506 aaPredicted RBP18.57■□□□□ 0.56
HMGCR-208ENST00000509431 GBA2Q9HCG7 927 aaPredicted RBP18.57■□□□□ 0.56
HMGCR-208ENST00000509431 HDAC9Q9UKV0 1011 aa18.57■□□□□ 0.56
HMGCR-208ENST00000509431 NIP7Q9Y221 180 aaKnown RBP eCLIP18.57■□□□□ 0.56
HMGCR-208ENST00000509431 PPIP5K2O43314 1243 aa18.56■□□□□ 0.56
HMGCR-208ENST00000509431 GTF2E1P29083 439 aaPredicted RBP18.56■□□□□ 0.56
HMGCR-208ENST00000509431 IL13P35225 146 aa18.56■□□□□ 0.56
HMGCR-208ENST00000509431 FMNL2Q96PY5 1086 aa18.56■□□□□ 0.56
HMGCR-208ENST00000509431 DLL1O00548 723 aa18.55■□□□□ 0.56
HMGCR-208ENST00000509431 HIRAP54198 1017 aaPredicted RBP18.55■□□□□ 0.56
HMGCR-208ENST00000509431 CXCL9Q07325 125 aa18.55■□□□□ 0.56
HMGCR-208ENST00000509431 FBXO46Q6PJ61 603 aaPredicted RBP18.55■□□□□ 0.56
HMGCR-208ENST00000509431 CSRNP1Q96S65 589 aa18.55■□□□□ 0.56
HMGCR-208ENST00000509431 ZNRF3Q9ULT6 936 aa18.55■□□□□ 0.56
HMGCR-208ENST00000509431 SLC10A3P09131 477 aa18.54■□□□□ 0.56
HMGCR-208ENST00000509431 USP48Q86UV5 1035 aa18.54■□□□□ 0.56
HMGCR-208ENST00000509431 BCL2L13Q9BXK5 485 aa18.54■□□□□ 0.56
HMGCR-208ENST00000509431 KIF7Q2M1P5 1343 aa18.53■□□□□ 0.56
HMGCR-208ENST00000509431 HOXA10P31260 410 aaPredicted RBP18.53■□□□□ 0.56
HMGCR-208ENST00000509431 RPGRQ92834 1020 aaKnown RBP18.53■□□□□ 0.56
HMGCR-208ENST00000509431 TEFQ10587 303 aa18.52■□□□□ 0.56
HMGCR-208ENST00000509431 TNIP1Q15025 636 aa18.52■□□□□ 0.56
HMGCR-208ENST00000509431 AOC3Q16853 763 aa18.52■□□□□ 0.56
HMGCR-208ENST00000509431 TRPM4Q8TD43 1214 aa18.52■□□□□ 0.56
HMGCR-208ENST00000509431 RIC1Q4ADV7 1423 aa18.51■□□□□ 0.55
HMGCR-208ENST00000509431 H7C1D1 291 aa18.51■□□□□ 0.55
HMGCR-208ENST00000509431 MTHFSDQ2M296 383 aaKnown RBP18.51■□□□□ 0.55
HMGCR-208ENST00000509431 SUPT20HQ8NEM7 779 aa18.51■□□□□ 0.55
HMGCR-208ENST00000509431 NYXQ9GZU5 481 aa18.51■□□□□ 0.55
HMGCR-208ENST00000509431 TMX4Q9H1E5 349 aaPredicted RBP18.51■□□□□ 0.55
HMGCR-208ENST00000509431 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
HMGCR-208ENST00000509431 FAM177BA6PVY3 158 aa18.5■□□□□ 0.55
HMGCR-208ENST00000509431 NOM1Q5C9Z4 860 aaKnown RBP18.5■□□□□ 0.55
HMGCR-208ENST00000509431 CRAMP1Q96RY5 1269 aa18.5■□□□□ 0.55
HMGCR-208ENST00000509431 POLR2AP24928 1970 aaKnown RBP18.5■□□□□ 0.55
HMGCR-208ENST00000509431 PPEF1O14829 653 aaPredicted RBP18.49■□□□□ 0.55
HMGCR-208ENST00000509431 KRT26Q7Z3Y9 468 aa18.49■□□□□ 0.55
HMGCR-208ENST00000509431 ZNF296Q8WUU4 475 aaPredicted RBP18.49■□□□□ 0.55
HMGCR-208ENST00000509431 CNOT7Q9UIV1 285 aaKnown RBP18.49■□□□□ 0.55
HMGCR-208ENST00000509431 RBM17Q96I25 401 aaKnown RBP18.48■□□□□ 0.55
HMGCR-208ENST00000509431 ABCC12Q96J65 1359 aa18.47■□□□□ 0.55
HMGCR-208ENST00000509431 INTS3Q68E01 1043 aaKnown RBP18.47■□□□□ 0.55
HMGCR-208ENST00000509431 MORC1Q86VD1 984 aa18.46■□□□□ 0.55
HMGCR-208ENST00000509431 RTFDC1Q9BY42 306 aaPredicted RBP18.46■□□□□ 0.55
HMGCR-208ENST00000509431 HMOX1P09601 288 aa18.45■□□□□ 0.54
HMGCR-208ENST00000509431 MICALL2Q8IY33 904 aa18.45■□□□□ 0.54
HMGCR-208ENST00000509431 SLC17A8Q8NDX2 589 aa18.45■□□□□ 0.54
HMGCR-208ENST00000509431 DPF2Q92785 391 aa18.45■□□□□ 0.54
HMGCR-208ENST00000509431 DCPSQ96C86 337 aaKnown RBP18.45■□□□□ 0.54
HMGCR-208ENST00000509431 USP16Q9Y5T5 823 aa18.45■□□□□ 0.54
HMGCR-208ENST00000509431 RBBP6Q7Z6E9 1792 aaKnown RBP18.45■□□□□ 0.54
HMGCR-208ENST00000509431 RAD17O75943 681 aa18.44■□□□□ 0.54
HMGCR-208ENST00000509431 PIP4K2AP48426 406 aaPredicted RBP18.44■□□□□ 0.54
HMGCR-208ENST00000509431 RASAL3Q86YV0 1011 aa18.44■□□□□ 0.54
HMGCR-208ENST00000509431 ATP6V0A2Q9Y487 856 aa18.44■□□□□ 0.54
HMGCR-208ENST00000509431 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
HMGCR-208ENST00000509431 GPR25O00155 361 aa18.43■□□□□ 0.54
HMGCR-208ENST00000509431 KIAA2012Q0VF49 1180 aa18.43■□□□□ 0.54
HMGCR-208ENST00000509431 DLK2Q6UY11 383 aa18.43■□□□□ 0.54
HMGCR-208ENST00000509431 NUTM1Q86Y26 1132 aa18.43■□□□□ 0.54
HMGCR-208ENST00000509431 COLQQ9Y215 455 aaPredicted RBP18.43■□□□□ 0.54
HMGCR-208ENST00000509431 KIAA0100Q14667 2235 aaKnown RBP18.42■□□□□ 0.54
HMGCR-208ENST00000509431 GNAT3A8MTJ3 354 aa18.42■□□□□ 0.54
HMGCR-208ENST00000509431 TCERG1O14776 1098 aaKnown RBP18.42■□□□□ 0.54
HMGCR-208ENST00000509431 TBC1D8O95759 1140 aa18.42■□□□□ 0.54
HMGCR-208ENST00000509431 IL17REQ8NFR9 667 aa18.42■□□□□ 0.54
HMGCR-208ENST00000509431 ADM5C9JUS6 153 aa18.41■□□□□ 0.54
HMGCR-208ENST00000509431 FKBP1BP68106 108 aa18.41■□□□□ 0.54
HMGCR-208ENST00000509431 HLFQ16534 295 aa18.41■□□□□ 0.54
HMGCR-208ENST00000509431 MKI67P46013 3256 aaKnown RBP18.41■□□□□ 0.54
HMGCR-208ENST00000509431 TRIOBPQ9H2D6 2365 aa18.4■□□□□ 0.54
HMGCR-208ENST00000509431 SHTN1A0MZ66 631 aa18.4■□□□□ 0.54
HMGCR-208ENST00000509431 POTEFA5A3E0 1075 aa18.4■□□□□ 0.54
HMGCR-208ENST00000509431 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
HMGCR-208ENST00000509431 SNRPA1P09661 255 aaKnown RBP18.4■□□□□ 0.54
HMGCR-208ENST00000509431 SAMD7Q7Z3H4 446 aa18.4■□□□□ 0.54
HMGCR-208ENST00000509431 GAS2L2Q8NHY3 880 aa18.4■□□□□ 0.54
HMGCR-208ENST00000509431 FKTNO75072 461 aa18.39■□□□□ 0.53
HMGCR-208ENST00000509431 DPP8Q6V1X1 898 aaPredicted RBP18.39■□□□□ 0.53
HMGCR-208ENST00000509431 SULF1Q8IWU6 871 aa18.39■□□□□ 0.53
HMGCR-208ENST00000509431 PAPPA2Q9BXP8 1791 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms