RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 IBTKQ9P2D0 1353 aaPredicted RBP20.81■□□□□ 0.92
PDLIM5-212ENST00000509333 ARFGEF1Q9Y6D6 1849 aa20.81■□□□□ 0.92
PDLIM5-212ENST00000509333 FANCIQ9NVI1 1328 aa20.8■□□□□ 0.92
PDLIM5-212ENST00000509333 ATP5J2-PTCD1G3V325 749 aa20.8■□□□□ 0.92
PDLIM5-212ENST00000509333 TCERG1O14776 1098 aaKnown RBP20.8■□□□□ 0.92
PDLIM5-212ENST00000509333 EXOSC9Q06265 439 aaKnown RBP20.8■□□□□ 0.92
PDLIM5-212ENST00000509333 C3orf67Q6ZVT6 689 aa20.8■□□□□ 0.92
PDLIM5-212ENST00000509333 RIC3Q7Z5B4 369 aa20.8■□□□□ 0.92
PDLIM5-212ENST00000509333 ADCY9O60503 1353 aa20.8■□□□□ 0.92
PDLIM5-212ENST00000509333 ZNF521Q96K83 1311 aa20.79■□□□□ 0.92
PDLIM5-212ENST00000509333 NFKBIEO00221 500 aa20.79■□□□□ 0.92
PDLIM5-212ENST00000509333 NLRP3Q96P20 1036 aa20.79■□□□□ 0.92
PDLIM5-212ENST00000509333 TRMT112Q9UI30 125 aaKnown RBP20.79■□□□□ 0.92
PDLIM5-212ENST00000509333 ABCC12Q96J65 1359 aa20.79■□□□□ 0.92
PDLIM5-212ENST00000509333 SLC4A2P04920 1241 aa20.78■□□□□ 0.92
PDLIM5-212ENST00000509333 RASSF7Q02833 373 aa20.77■□□□□ 0.92
PDLIM5-212ENST00000509333 G2E3Q7L622 706 aa20.77■□□□□ 0.92
PDLIM5-212ENST00000509333 RNF181Q9P0P0 153 aa20.77■□□□□ 0.92
PDLIM5-212ENST00000509333 SLX4Q8IY92 1834 aa20.76■□□□□ 0.91
PDLIM5-212ENST00000509333 HCLS1P14317 486 aaPredicted RBP20.76■□□□□ 0.91
PDLIM5-212ENST00000509333 LMNB1P20700 586 aa20.76■□□□□ 0.91
PDLIM5-212ENST00000509333 DIEXFQ68CQ4 756 aaKnown RBP20.76■□□□□ 0.91
PDLIM5-212ENST00000509333 ZNF428Q96B54 188 aa20.76■□□□□ 0.91
PDLIM5-212ENST00000509333 CRAMP1Q96RY5 1269 aa20.76■□□□□ 0.91
PDLIM5-212ENST00000509333 STK31Q9BXU1 1019 aa20.76■□□□□ 0.91
PDLIM5-212ENST00000509333 MYH16Q9H6N6 1097 aa20.76■□□□□ 0.91
PDLIM5-212ENST00000509333 DLEC1Q9Y238 1755 aa20.76■□□□□ 0.91
PDLIM5-212ENST00000509333 RNF123Q5XPI4 1314 aa20.76■□□□□ 0.91
PDLIM5-212ENST00000509333 SH3TC1Q8TE82 1336 aa20.76■□□□□ 0.91
PDLIM5-212ENST00000509333 KSR2Q6VAB6 950 aa20.75■□□□□ 0.91
PDLIM5-212ENST00000509333 MIER1Q8N108 512 aa20.75■□□□□ 0.91
PDLIM5-212ENST00000509333 RBM17Q96I25 401 aaKnown RBP20.75■□□□□ 0.91
PDLIM5-212ENST00000509333 METTL22Q9BUU2 404 aaPredicted RBP20.75■□□□□ 0.91
PDLIM5-212ENST00000509333 DDX58O95786 925 aaKnown RBP20.74■□□□□ 0.91
PDLIM5-212ENST00000509333 RIC1Q4ADV7 1423 aa20.74■□□□□ 0.91
PDLIM5-212ENST00000509333 SOGA3Q5TF21 947 aa20.74■□□□□ 0.91
PDLIM5-212ENST00000509333 OLFM4Q6UX06 510 aa20.74■□□□□ 0.91
PDLIM5-212ENST00000509333 ZNF526Q8TF50 670 aaPredicted RBP20.74■□□□□ 0.91
PDLIM5-212ENST00000509333 RPGRQ92834 1020 aaKnown RBP20.74■□□□□ 0.91
PDLIM5-212ENST00000509333 FAM89AQ96GI7 184 aa20.74■□□□□ 0.91
PDLIM5-212ENST00000509333 GPBP1L1Q9HC44 474 aaPredicted RBP20.74■□□□□ 0.91
PDLIM5-212ENST00000509333 PI4KAP2A4QPH2 592 aa20.73■□□□□ 0.91
PDLIM5-212ENST00000509333 PI4KAP1Q8N8J0 262 aa20.73■□□□□ 0.91
PDLIM5-212ENST00000509333 MYD88Q99836 296 aa20.73■□□□□ 0.91
PDLIM5-212ENST00000509333 MAP3K2Q9Y2U5 619 aa20.73■□□□□ 0.91
PDLIM5-212ENST00000509333 COL11A2P13942 1736 aaPredicted RBP20.73■□□□□ 0.91
PDLIM5-212ENST00000509333 LTBP3Q9NS15 1303 aa20.72■□□□□ 0.91
PDLIM5-212ENST00000509333 SBF1O95248 1867 aa20.71■□□□□ 0.91
PDLIM5-212ENST00000509333 CCDC191Q8NCU4 936 aa20.71■□□□□ 0.91
PDLIM5-212ENST00000509333 SLFN5Q08AF3 891 aa20.7■□□□□ 0.9
PDLIM5-212ENST00000509333 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
PDLIM5-212ENST00000509333 CCDC93Q567U6 631 aa20.7■□□□□ 0.9
PDLIM5-212ENST00000509333 CC2D2BQ6DHV5 1058 aa20.7■□□□□ 0.9
PDLIM5-212ENST00000509333 RTKN2Q8IZC4 609 aa20.7■□□□□ 0.9
PDLIM5-212ENST00000509333 ZBTB38Q8NAP3 1195 aaPredicted RBP20.7■□□□□ 0.9
PDLIM5-212ENST00000509333 TAOK3Q9H2K8 898 aa20.7■□□□□ 0.9
PDLIM5-212ENST00000509333 BBOX1O75936 387 aa20.69■□□□□ 0.9
PDLIM5-212ENST00000509333 IGKV5-2P06315 115 aa20.69■□□□□ 0.9
PDLIM5-212ENST00000509333 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
PDLIM5-212ENST00000509333 IRS4O14654 1257 aaPredicted RBP20.68■□□□□ 0.9
PDLIM5-212ENST00000509333 FLIIQ13045 1269 aa20.68■□□□□ 0.9
PDLIM5-212ENST00000509333 JARID2Q92833 1246 aaPredicted RBP20.68■□□□□ 0.9
PDLIM5-212ENST00000509333 CDCA7LQ96GN5 454 aa20.68■□□□□ 0.9
PDLIM5-212ENST00000509333 CWC25Q9NXE8 425 aaPredicted RBP20.68■□□□□ 0.9
PDLIM5-212ENST00000509333 E9PSI1 815 aa20.67■□□□□ 0.9
PDLIM5-212ENST00000509333 KIF3CO14782 793 aa20.67■□□□□ 0.9
PDLIM5-212ENST00000509333 PCCAP05165 728 aaPredicted RBP20.67■□□□□ 0.9
PDLIM5-212ENST00000509333 C1QTNF8P60827 252 aa20.67■□□□□ 0.9
PDLIM5-212ENST00000509333 FKBP4Q02790 459 aaKnown RBP eCLIP20.67■□□□□ 0.9
PDLIM5-212ENST00000509333 TRMT2AQ8IZ69 625 aaKnown RBP20.67■□□□□ 0.9
PDLIM5-212ENST00000509333 DDX46Q7L014 1031 aaKnown RBP20.66■□□□□ 0.9
PDLIM5-212ENST00000509333 ATP6V0A2Q9Y487 856 aa20.66■□□□□ 0.9
PDLIM5-212ENST00000509333 ZC3H4Q9UPT8 1303 aaKnown RBP20.66■□□□□ 0.9
PDLIM5-212ENST00000509333 TNRC6CQ9HCJ0 1690 aaKnown RBP20.66■□□□□ 0.9
PDLIM5-212ENST00000509333 FER1L6Q2WGJ9 1857 aa20.65■□□□□ 0.9
PDLIM5-212ENST00000509333 ABCC4O15439 1325 aa20.65■□□□□ 0.9
PDLIM5-212ENST00000509333 GLTPD2A6NH11 291 aa20.65■□□□□ 0.9
PDLIM5-212ENST00000509333 GRIPAP1Q4V328 841 aa20.65■□□□□ 0.9
PDLIM5-212ENST00000509333 SLC51AQ86UW1 340 aa20.65■□□□□ 0.9
PDLIM5-212ENST00000509333 SP8Q8IXZ3 490 aa20.65■□□□□ 0.9
PDLIM5-212ENST00000509333 NMRK2Q9NPI5 230 aa20.65■□□□□ 0.9
PDLIM5-212ENST00000509333 PPEF1O14829 653 aaPredicted RBP20.64■□□□□ 0.89
PDLIM5-212ENST00000509333 NEXNQ0ZGT2 675 aa20.64■□□□□ 0.89
PDLIM5-212ENST00000509333 FKBP5Q13451 457 aaPredicted RBP20.64■□□□□ 0.89
PDLIM5-212ENST00000509333 PSMD1Q99460 953 aa20.64■□□□□ 0.89
PDLIM5-212ENST00000509333 RRAGCQ9HB90 399 aa20.64■□□□□ 0.89
PDLIM5-212ENST00000509333 ZNF277Q9NRM2 450 aaPredicted RBP20.64■□□□□ 0.89
PDLIM5-212ENST00000509333 ANKRD36CQ5JPF3 1778 aa20.64■□□□□ 0.89
PDLIM5-212ENST00000509333 CCDC88AQ3V6T2 1871 aa20.63■□□□□ 0.89
PDLIM5-212ENST00000509333 KDM2BQ8NHM5 1336 aa20.63■□□□□ 0.89
PDLIM5-212ENST00000509333 NEURL1BA8MQ27 555 aa20.63■□□□□ 0.89
PDLIM5-212ENST00000509333 H7C1W4 665 aa20.63■□□□□ 0.89
PDLIM5-212ENST00000509333 GRAPQ13588 217 aa20.63■□□□□ 0.89
PDLIM5-212ENST00000509333 CWF19L2Q2TBE0 894 aaKnown RBP20.63■□□□□ 0.89
PDLIM5-212ENST00000509333 GRAPLQ8TC17 118 aaPredicted RBP20.63■□□□□ 0.89
PDLIM5-212ENST00000509333 DNAAF4Q8WXU2 420 aa20.63■□□□□ 0.89
PDLIM5-212ENST00000509333 SNED1Q8TER0 1413 aa20.62■□□□□ 0.89
PDLIM5-212ENST00000509333 HSP90B1P14625 803 aaKnown RBP20.62■□□□□ 0.89
PDLIM5-212ENST00000509333 DPY19L2Q6NUT2 758 aa20.62■□□□□ 0.89
PDLIM5-212ENST00000509333 PDE8AO60658 829 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms