RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
SPOCK1-206ENST00000509293 MEIS3Q99687 375 aa18.02■□□□□ 0.48
SPOCK1-206ENST00000509293 C9orf78Q9NZ63 289 aaPredicted RBP18.02■□□□□ 0.48
SPOCK1-206ENST00000509293 NIP7Q9Y221 180 aaKnown RBP eCLIP18.02■□□□□ 0.48
SPOCK1-206ENST00000509293 UBN2Q6ZU65 1347 aa18.01■□□□□ 0.47
SPOCK1-206ENST00000509293 PCCAP05165 728 aaPredicted RBP18.01■□□□□ 0.47
SPOCK1-206ENST00000509293 ZBTB38Q8NAP3 1195 aaPredicted RBP18.01■□□□□ 0.47
SPOCK1-206ENST00000509293 SLC16A10Q8TF71 515 aa18.01■□□□□ 0.47
SPOCK1-206ENST00000509293 UBTFL1P0CB47 393 aaPredicted RBP18■□□□□ 0.47
SPOCK1-206ENST00000509293 GPTP24298 496 aa18■□□□□ 0.47
SPOCK1-206ENST00000509293 TBC1D9BQ66K14 1250 aa18■□□□□ 0.47
SPOCK1-206ENST00000509293 PPP1R42Q7Z4L9 355 aa18■□□□□ 0.47
SPOCK1-206ENST00000509293 SETDB2Q96T68 719 aa18■□□□□ 0.47
SPOCK1-206ENST00000509293 GNAI2P04899 355 aa17.99■□□□□ 0.47
SPOCK1-206ENST00000509293 NBPF7P0C2Y1 421 aaPredicted RBP17.99■□□□□ 0.47
SPOCK1-206ENST00000509293 TM4SF1P30408 202 aa17.99■□□□□ 0.47
SPOCK1-206ENST00000509293 CASP7P55210 303 aa17.99■□□□□ 0.47
SPOCK1-206ENST00000509293 UTP14AQ9BVJ6 771 aaKnown RBP17.99■□□□□ 0.47
SPOCK1-206ENST00000509293 AFDNP55196 1824 aaKnown RBP17.99■□□□□ 0.47
SPOCK1-206ENST00000509293 CDHR2Q9BYE9 1310 aa17.98■□□□□ 0.47
SPOCK1-206ENST00000509293 MSH5O43196 834 aa17.98■□□□□ 0.47
SPOCK1-206ENST00000509293 HSP90B1P14625 803 aaKnown RBP17.98■□□□□ 0.47
SPOCK1-206ENST00000509293 NFIXQ14938 502 aa17.98■□□□□ 0.47
SPOCK1-206ENST00000509293 SUSD4Q5VX71 490 aa17.98■□□□□ 0.47
SPOCK1-206ENST00000509293 NYXQ9GZU5 481 aa17.98■□□□□ 0.47
SPOCK1-206ENST00000509293 CARMIL3Q8ND23 1372 aa17.98■□□□□ 0.47
SPOCK1-206ENST00000509293 NTSR2O95665 410 aa17.97■□□□□ 0.47
SPOCK1-206ENST00000509293 UBE3BQ7Z3V4 1068 aa17.97■□□□□ 0.47
SPOCK1-206ENST00000509293 TRMT112Q9UI30 125 aaKnown RBP17.97■□□□□ 0.47
SPOCK1-206ENST00000509293 COL24A1Q17RW2 1714 aa17.97■□□□□ 0.47
SPOCK1-206ENST00000509293 SH3TC1Q8TE82 1336 aa17.97■□□□□ 0.47
SPOCK1-206ENST00000509293 PLA2G12BQ9BX93 195 aa17.96■□□□□ 0.47
SPOCK1-206ENST00000509293 TPTE2Q6XPS3 522 aa17.95■□□□□ 0.46
SPOCK1-206ENST00000509293 BICDL1Q6ZP65 573 aa17.95■□□□□ 0.46
SPOCK1-206ENST00000509293 RPAP2Q8IXW5 612 aaPredicted RBP17.95■□□□□ 0.46
SPOCK1-206ENST00000509293 MTX1Q13505 466 aa17.94■□□□□ 0.46
SPOCK1-206ENST00000509293 SLC10A5Q5PT55 438 aa17.94■□□□□ 0.46
SPOCK1-206ENST00000509293 NBPF5PQ86XG9 351 aaPredicted RBP17.94■□□□□ 0.46
SPOCK1-206ENST00000509293 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
SPOCK1-206ENST00000509293 PPP4R2Q9NY27 417 aa17.94■□□□□ 0.46
SPOCK1-206ENST00000509293 LRRFIP2Q9Y608 721 aaKnown RBP17.94■□□□□ 0.46
SPOCK1-206ENST00000509293 RIC1Q4ADV7 1423 aa17.93■□□□□ 0.46
SPOCK1-206ENST00000509293 POLRMTO00411 1230 aaKnown RBP17.93■□□□□ 0.46
SPOCK1-206ENST00000509293 RABL6Q3YEC7 729 aaPredicted RBP17.93■□□□□ 0.46
SPOCK1-206ENST00000509293 KAZALD1Q96I82 304 aa17.93■□□□□ 0.46
SPOCK1-206ENST00000509293 SUCLG2Q96I99 432 aa17.93■□□□□ 0.46
SPOCK1-206ENST00000509293 PCDHB15Q9Y5E8 787 aa17.93■□□□□ 0.46
SPOCK1-206ENST00000509293 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
SPOCK1-206ENST00000509293 DDR1Q08345 913 aa17.92■□□□□ 0.46
SPOCK1-206ENST00000509293 CEP85Q6P2H3 762 aa17.92■□□□□ 0.46
SPOCK1-206ENST00000509293 ANKRD44Q8N8A2 993 aa17.92■□□□□ 0.46
SPOCK1-206ENST00000509293 GTF3C3Q9Y5Q9 886 aa17.92■□□□□ 0.46
SPOCK1-206ENST00000509293 PDE8AO60658 829 aa17.91■□□□□ 0.46
SPOCK1-206ENST00000509293 SERPINB2P05120 415 aa17.91■□□□□ 0.46
SPOCK1-206ENST00000509293 MMP10P09238 476 aa17.91■□□□□ 0.46
SPOCK1-206ENST00000509293 ATP8B2P98198 1209 aa17.91■□□□□ 0.46
SPOCK1-206ENST00000509293 HDAC1Q13547 482 aaPredicted RBP17.91■□□□□ 0.46
SPOCK1-206ENST00000509293 R3HDM1Q15032 1099 aaKnown RBP17.91■□□□□ 0.46
SPOCK1-206ENST00000509293 CASZ1Q86V15 1759 aa17.91■□□□□ 0.46
SPOCK1-206ENST00000509293 FOXO4P98177 505 aa17.9■□□□□ 0.46
SPOCK1-206ENST00000509293 CNBD1Q8NA66 436 aa17.9■□□□□ 0.46
SPOCK1-206ENST00000509293 PDGFDQ9GZP0 370 aaPredicted RBP17.9■□□□□ 0.46
SPOCK1-206ENST00000509293 BICC1Q9H694 974 aaKnown RBP17.9■□□□□ 0.46
SPOCK1-206ENST00000509293 C1orf115Q9H7X2 142 aa17.9■□□□□ 0.46
SPOCK1-206ENST00000509293 HMMRO75330 724 aa17.89■□□□□ 0.45
SPOCK1-206ENST00000509293 CSF1RP07333 972 aa17.89■□□□□ 0.45
SPOCK1-206ENST00000509293 GTF2E1P29083 439 aaPredicted RBP17.89■□□□□ 0.45
SPOCK1-206ENST00000509293 ERFEQ4G0M1 354 aa17.89■□□□□ 0.45
SPOCK1-206ENST00000509293 PRR5LQ6MZQ0 368 aa17.89■□□□□ 0.45
SPOCK1-206ENST00000509293 SYNE4Q8N205 404 aa17.89■□□□□ 0.45
SPOCK1-206ENST00000509293 JARID2Q92833 1246 aaPredicted RBP17.89■□□□□ 0.45
SPOCK1-206ENST00000509293 MTFR1LQ9H019 292 aa17.89■□□□□ 0.45
SPOCK1-206ENST00000509293 RWDD1Q9H446 243 aaPredicted RBP17.89■□□□□ 0.45
SPOCK1-206ENST00000509293 PARP3Q9Y6F1 533 aa17.89■□□□□ 0.45
SPOCK1-206ENST00000509293 NRXN2Q9P2S2 1712 aa17.89■□□□□ 0.45
SPOCK1-206ENST00000509293 FAM177BA6PVY3 158 aa17.88■□□□□ 0.45
SPOCK1-206ENST00000509293 RTL5Q5HYW3 569 aaPredicted RBP17.88■□□□□ 0.45
SPOCK1-206ENST00000509293 EPHA10Q5JZY3 1008 aa17.88■□□□□ 0.45
SPOCK1-206ENST00000509293 NUTM1Q86Y26 1132 aa17.88■□□□□ 0.45
SPOCK1-206ENST00000509293 SIRT2Q8IXJ6 389 aa17.88■□□□□ 0.45
SPOCK1-206ENST00000509293 SSH3Q8TE77 659 aa17.88■□□□□ 0.45
SPOCK1-206ENST00000509293 LAMB2P55268 1798 aa17.87■□□□□ 0.45
SPOCK1-206ENST00000509293 CTSWP56202 376 aa17.87■□□□□ 0.45
SPOCK1-206ENST00000509293 ST5P78524 1137 aa17.87■□□□□ 0.45
SPOCK1-206ENST00000509293 POLA2Q14181 598 aa17.87■□□□□ 0.45
SPOCK1-206ENST00000509293 SF3B3Q15393 1217 aaKnown RBP17.87■□□□□ 0.45
SPOCK1-206ENST00000509293 MSL1Q68DK7 614 aa17.87■□□□□ 0.45
SPOCK1-206ENST00000509293 RTL9Q8NET4 1388 aa17.87■□□□□ 0.45
SPOCK1-206ENST00000509293 SOCS7O14512 581 aa17.86■□□□□ 0.45
SPOCK1-206ENST00000509293 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
SPOCK1-206ENST00000509293 LMBR1LQ6UX01 489 aa17.86■□□□□ 0.45
SPOCK1-206ENST00000509293 TTLL11Q8NHH1 800 aa17.86■□□□□ 0.45
SPOCK1-206ENST00000509293 CCDC136Q96JN2 1154 aa17.86■□□□□ 0.45
SPOCK1-206ENST00000509293 ABCC12Q96J65 1359 aa17.86■□□□□ 0.45
SPOCK1-206ENST00000509293 KLRG2A4D1S0 409 aaPredicted RBP17.85■□□□□ 0.45
SPOCK1-206ENST00000509293 NPHP1O15259 732 aa17.85■□□□□ 0.45
SPOCK1-206ENST00000509293 SRGAP3O43295 1099 aa17.85■□□□□ 0.45
SPOCK1-206ENST00000509293 NLRP3Q96P20 1036 aa17.85■□□□□ 0.45
SPOCK1-206ENST00000509293 BRIP1Q9BX63 1249 aa17.85■□□□□ 0.45
SPOCK1-206ENST00000509293 DDX60Q8IY21 1712 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms