RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 ARSDP51689 593 aa13.28□□□□□ -0.28
CHD1-205ENST00000508756 KCNQ4P56696 695 aa13.28□□□□□ -0.28
CHD1-205ENST00000508756 FAM182BQ5T319 152 aa13.28□□□□□ -0.28
CHD1-205ENST00000508756 NSFL1CQ9UNZ2 370 aaKnown RBP13.28□□□□□ -0.28
CHD1-205ENST00000508756 SLC30A3Q99726 388 aa13.27□□□□□ -0.29
CHD1-205ENST00000508756 SLURP2P0DP57 97 aa13.26□□□□□ -0.29
CHD1-205ENST00000508756 MPSTP25325 297 aa13.26□□□□□ -0.29
CHD1-205ENST00000508756 MAP2K3P46734 347 aa13.26□□□□□ -0.29
CHD1-205ENST00000508756 ABTB2Q8N961 1025 aa13.26□□□□□ -0.29
CHD1-205ENST00000508756 PDIA4P13667 645 aaKnown RBP13.25□□□□□ -0.29
CHD1-205ENST00000508756 ZAP70P43403 619 aa13.25□□□□□ -0.29
CHD1-205ENST00000508756 RGL4Q8IZJ4 473 aa13.25□□□□□ -0.29
CHD1-205ENST00000508756 SPEM2Q0P670 501 aa13.24□□□□□ -0.29
CHD1-205ENST00000508756 RAB44Q7Z6P3 723 aaPredicted RBP13.24□□□□□ -0.29
CHD1-205ENST00000508756 ATCAYQ86WG3 371 aa13.24□□□□□ -0.29
CHD1-205ENST00000508756 WHAMMQ8TF30 809 aa13.24□□□□□ -0.29
CHD1-205ENST00000508756 RTCBQ9Y3I0 505 aaKnown RBP13.24□□□□□ -0.29
CHD1-205ENST00000508756 EPB42P16452 691 aa13.23□□□□□ -0.29
CHD1-205ENST00000508756 LORP23490 312 aaPredicted RBP13.23□□□□□ -0.29
CHD1-205ENST00000508756 ACDQ96AP0 544 aa13.23□□□□□ -0.29
CHD1-205ENST00000508756 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
CHD1-205ENST00000508756 CCER1Q8TC90 406 aaPredicted RBP13.22□□□□□ -0.29
CHD1-205ENST00000508756 OXCT2Q9BYC2 517 aaPredicted RBP13.22□□□□□ -0.29
CHD1-205ENST00000508756 EGFL7Q9UHF1 273 aa13.22□□□□□ -0.29
CHD1-205ENST00000508756 PRR12Q9ULL5 1215 aa13.22□□□□□ -0.29
CHD1-205ENST00000508756 H3BRB1 525 aa13.21□□□□□ -0.29
CHD1-205ENST00000508756 SF3B2Q13435 895 aaKnown RBP13.21□□□□□ -0.29
CHD1-205ENST00000508756 TUT1Q9H6E5 874 aaKnown RBP13.21□□□□□ -0.29
CHD1-205ENST00000508756 ICMTO60725 284 aa13.2□□□□□ -0.3
CHD1-205ENST00000508756 EIF1AXP47813 144 aaKnown RBP13.2□□□□□ -0.3
CHD1-205ENST00000508756 PCBP4P57723 403 aaKnown RBP13.2□□□□□ -0.3
CHD1-205ENST00000508756 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
CHD1-205ENST00000508756 LYPD4Q6UWN0 246 aa13.2□□□□□ -0.3
CHD1-205ENST00000508756 CMTR1Q8N1G2 835 aaKnown RBP13.2□□□□□ -0.3
CHD1-205ENST00000508756 GPR152Q8TDT2 470 aa13.2□□□□□ -0.3
CHD1-205ENST00000508756 KLF15Q9UIH9 416 aa13.2□□□□□ -0.3
CHD1-205ENST00000508756 ARAFP10398 606 aa13.19□□□□□ -0.3
CHD1-205ENST00000508756 NPR3P17342 541 aa13.19□□□□□ -0.3
CHD1-205ENST00000508756 ZNF468Q5VIY5 522 aaPredicted RBP13.19□□□□□ -0.3
CHD1-205ENST00000508756 GSX2Q9BZM3 304 aa13.19□□□□□ -0.3
CHD1-205ENST00000508756 GGA1Q9UJY5 639 aa13.19□□□□□ -0.3
CHD1-205ENST00000508756 GNEQ9Y223 722 aaKnown RBP13.19□□□□□ -0.3
CHD1-205ENST00000508756 FAM13AO94988 1023 aa13.18□□□□□ -0.3
CHD1-205ENST00000508756 INSM1Q01101 510 aaPredicted RBP13.18□□□□□ -0.3
CHD1-205ENST00000508756 ZNF385CQ66K41 422 aaPredicted RBP13.18□□□□□ -0.3
CHD1-205ENST00000508756 SYT9Q86SS6 491 aa13.18□□□□□ -0.3
CHD1-205ENST00000508756 ZSCAN1Q8NBB4 408 aa13.18□□□□□ -0.3
CHD1-205ENST00000508756 BHMTQ93088 406 aa13.18□□□□□ -0.3
CHD1-205ENST00000508756 KCNMB2Q9Y691 235 aa13.18□□□□□ -0.3
CHD1-205ENST00000508756 NEURL1BA8MQ27 555 aa13.17□□□□□ -0.3
CHD1-205ENST00000508756 CELA2BP08218 269 aaPredicted RBP13.17□□□□□ -0.3
CHD1-205ENST00000508756 KCNA1Q09470 495 aa13.17□□□□□ -0.3
CHD1-205ENST00000508756 CCINQ13939 588 aa13.17□□□□□ -0.3
CHD1-205ENST00000508756 GLYCTKQ8IVS8 523 aa13.17□□□□□ -0.3
CHD1-205ENST00000508756 IVNS1ABPQ9Y6Y0 642 aa13.17□□□□□ -0.3
CHD1-205ENST00000508756 TRIP4Q15650 581 aaPredicted RBP13.16□□□□□ -0.3
CHD1-205ENST00000508756 KRT25Q7Z3Z0 450 aa13.16□□□□□ -0.3
CHD1-205ENST00000508756 SVOPQ8N4V2 548 aa13.16□□□□□ -0.3
CHD1-205ENST00000508756 PIK3R5Q8WYR1 880 aa13.16□□□□□ -0.3
CHD1-205ENST00000508756 XYLBO75191 536 aa13.15□□□□□ -0.3
CHD1-205ENST00000508756 ADH6P28332 368 aa13.15□□□□□ -0.3
CHD1-205ENST00000508756 ECM1Q16610 540 aa13.15□□□□□ -0.3
CHD1-205ENST00000508756 C1orf229Q6ZS94 237 aaPredicted RBP13.15□□□□□ -0.3
CHD1-205ENST00000508756 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.3
CHD1-205ENST00000508756 GOLGA6L1Q8N7Z2 621 aa13.15□□□□□ -0.3
CHD1-205ENST00000508756 EDEM1Q92611 657 aa13.15□□□□□ -0.3
CHD1-205ENST00000508756 AVENQ9NQS1 362 aaPredicted RBP13.15□□□□□ -0.3
CHD1-205ENST00000508756 FAM13BQ9NYF5 915 aa13.15□□□□□ -0.3
CHD1-205ENST00000508756 GDF2Q9UK05 429 aaPredicted RBP13.15□□□□□ -0.3
CHD1-205ENST00000508756 NFKB1P19838 968 aa13.14□□□□□ -0.31
CHD1-205ENST00000508756 DNM1Q05193 864 aaKnown RBP13.14□□□□□ -0.31
CHD1-205ENST00000508756 AAMPQ13685 434 aa13.14□□□□□ -0.31
CHD1-205ENST00000508756 SLCO4C1Q6ZQN7 724 aa13.14□□□□□ -0.31
CHD1-205ENST00000508756 FCHSD1Q86WN1 690 aa13.14□□□□□ -0.31
CHD1-205ENST00000508756 PNMA5Q96PV4 448 aa13.14□□□□□ -0.31
CHD1-205ENST00000508756 SOWAHDA6NJG2 315 aa13.13□□□□□ -0.31
CHD1-205ENST00000508756 SASH3O75995 380 aa13.13□□□□□ -0.31
CHD1-205ENST00000508756 BCRP11274 1271 aa13.13□□□□□ -0.31
CHD1-205ENST00000508756 NEUROD1Q13562 356 aa13.13□□□□□ -0.31
CHD1-205ENST00000508756 ALKBH2Q6NS38 261 aa13.13□□□□□ -0.31
CHD1-205ENST00000508756 NUDT16Q96DE0 195 aaKnown RBP13.13□□□□□ -0.31
CHD1-205ENST00000508756 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.13□□□□□ -0.31
CHD1-205ENST00000508756 TARSP26639 723 aaKnown RBP13.12□□□□□ -0.31
CHD1-205ENST00000508756 HOMEZQ8IX15 550 aa13.12□□□□□ -0.31
CHD1-205ENST00000508756 ZFATQ9P243 1243 aa13.12□□□□□ -0.31
CHD1-205ENST00000508756 UBAP1LF5GYI3 381 aa13.11□□□□□ -0.31
CHD1-205ENST00000508756 OIP5O43482 229 aa13.11□□□□□ -0.31
CHD1-205ENST00000508756 FZD6O60353 706 aa13.11□□□□□ -0.31
CHD1-205ENST00000508756 SIN3BO75182 1162 aa13.11□□□□□ -0.31
CHD1-205ENST00000508756 EGFRP00533 1210 aa13.11□□□□□ -0.31
CHD1-205ENST00000508756 PDGFAP04085 211 aa13.11□□□□□ -0.31
CHD1-205ENST00000508756 ARHGAP4P98171 946 aa13.11□□□□□ -0.31
CHD1-205ENST00000508756 C11orf16Q9NQ32 467 aa13.11□□□□□ -0.31
CHD1-205ENST00000508756 CCDC87Q9NVE4 849 aa13.11□□□□□ -0.31
CHD1-205ENST00000508756 MZF1P28698 734 aaPredicted RBP13.1□□□□□ -0.31
CHD1-205ENST00000508756 MAP3K10Q02779 954 aa13.1□□□□□ -0.31
CHD1-205ENST00000508756 GALNT6Q8NCL4 622 aa13.1□□□□□ -0.31
CHD1-205ENST00000508756 POLIQ9UNA4 740 aa13.1□□□□□ -0.31
CHD1-205ENST00000508756 SHISA8B8ZZ34 492 aa13.09□□□□□ -0.31
CHD1-205ENST00000508756 EPXP11678 715 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms