RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 HCN4Q9Y3Q4 1203 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 PIK3R2O00459 728 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 ICMTO60725 284 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 LGR5O75473 907 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 ARAFP10398 606 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 PSMA6P60900 246 aaKnown RBP3.1□□□□□ -1.91
SMN2-208ENST00000508258 TNP2Q05952 138 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 TEAD4Q15561 434 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 ZDHHC1Q8WTX9 485 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 COL26A1Q96A83 441 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 DCAF5Q96JK2 942 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 CEP63Q96MT8 703 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 PHACTR1Q9C0D0 580 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 IGSF5Q9NSI5 407 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 LRRC4BQ9NT99 713 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 NDFIP2Q9NV92 336 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 MARK1Q9P0L2 795 aa3.1□□□□□ -1.91
SMN2-208ENST00000508258 C21orf2O43822 256 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 PTCD1O75127 700 aaKnown RBP3.09□□□□□ -1.91
SMN2-208ENST00000508258 IGHA1P01876 353 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 FAM157BP0CG42 384 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 EPXP11678 715 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 ALAS2P22557 587 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 EPHA4P54764 986 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 FOXK2Q01167 660 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 TBC1D8BQ0IIM8 1120 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 FKBP5Q13451 457 aaPredicted RBP3.09□□□□□ -1.91
SMN2-208ENST00000508258 NEUROD1Q13562 356 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 PLA2G4EQ3MJ16 856 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 CAPN12Q6ZSI9 719 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 CHSY3Q70JA7 882 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 RAB44Q7Z6P3 723 aaPredicted RBP3.09□□□□□ -1.91
SMN2-208ENST00000508258 SYT9Q86SS6 491 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 NPAS4Q8IUM7 802 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 ZNF295-AS1Q8N0V1 137 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 GTF3C2Q8WUA4 911 aaPredicted RBP3.09□□□□□ -1.91
SMN2-208ENST00000508258 SCG3Q8WXD2 468 aaKnown RBP3.09□□□□□ -1.91
SMN2-208ENST00000508258 HSH2DQ96JZ2 352 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 BTBD6Q96KE9 485 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 STRN4Q9NRL3 753 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 ANKIB1Q9P2G1 1089 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 SEPT3Q9UH03 358 aa3.09□□□□□ -1.91
SMN2-208ENST00000508258 EML1O00423 815 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 GNB5O14775 395 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 MSTNO14793 375 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 ABL1P00519 1130 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 ZNF16P17020 682 aaPredicted RBP3.08□□□□□ -1.92
SMN2-208ENST00000508258 NPR3P17342 541 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 IGFBP4P22692 258 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 ARHGAP4P98171 946 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 FKBP4Q02790 459 aaKnown RBP eCLIP3.08□□□□□ -1.92
SMN2-208ENST00000508258 SFSWAPQ12872 951 aaKnown RBP3.08□□□□□ -1.92
SMN2-208ENST00000508258 ZNF211Q13398 564 aaPredicted RBP3.08□□□□□ -1.92
SMN2-208ENST00000508258 SF3B2Q13435 895 aaKnown RBP3.08□□□□□ -1.92
SMN2-208ENST00000508258 FAM182BQ5T319 152 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 SAMD5Q5TGI4 173 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 ZNF468Q5VIY5 522 aaPredicted RBP3.08□□□□□ -1.92
SMN2-208ENST00000508258 ALDH16A1Q8IZ83 802 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 VTI1AQ96AJ9 217 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 IGFLR1Q9H665 355 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 BRD7Q9NPI1 651 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 KIAA1522Q9P206 1035 aaPredicted RBP3.08□□□□□ -1.92
SMN2-208ENST00000508258 BIN2Q9UBW5 565 aaPredicted RBP3.08□□□□□ -1.92
SMN2-208ENST00000508258 ATAD2Q6PL18 1390 aa3.08□□□□□ -1.92
SMN2-208ENST00000508258 ANKRD33BA6NCL7 494 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 H3BRB1 525 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 FOXO3O43524 673 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 SPEM2Q0P670 501 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 LAMC2Q13753 1193 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 SUZ12Q15022 739 aaKnown RBP3.07□□□□□ -1.92
SMN2-208ENST00000508258 C1orf53Q5VUE5 145 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 FCHSD1Q86WN1 690 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 GLYCTKQ8IVS8 523 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 ZNF280CQ8ND82 737 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 GAS2L2Q8NHY3 880 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 BHMTQ93088 406 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 SUSD3Q96L08 255 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 ASB16Q96NS5 453 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 PNMA5Q96PV4 448 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 SPOCK3Q9BQ16 436 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 SUV39H2Q9H5I1 410 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 TUT1Q9H6E5 874 aaKnown RBP3.07□□□□□ -1.92
SMN2-208ENST00000508258 ANO2Q9NQ90 1003 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 AVENQ9NQS1 362 aaPredicted RBP3.07□□□□□ -1.92
SMN2-208ENST00000508258 NOP53Q9NZM5 478 aaKnown RBP3.07□□□□□ -1.92
SMN2-208ENST00000508258 KCNH4Q9UQ05 1017 aa3.07□□□□□ -1.92
SMN2-208ENST00000508258 GPC6Q9Y625 555 aaPredicted RBP3.07□□□□□ -1.92
SMN2-208ENST00000508258 ELOA3CA0A087WX78 387 aaPredicted RBP3.06□□□□□ -1.92
SMN2-208ENST00000508258 KRBA1A5PL33 1030 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 ELOA3DA6NLF2 546 aaPredicted RBP3.06□□□□□ -1.92
SMN2-208ENST00000508258 EFSO43281 561 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 VAMP1P23763 118 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 DGKGP49619 791 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 MTMR3Q13615 1198 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 COL19A1Q14993 1142 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 HIF1AQ16665 826 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 ELOA3BQ3SY89 546 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 POTEAQ6S8J7 498 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 LINC00114Q6XXX2 140 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 FBXO33Q7Z6M2 555 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms