RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ICMTO60725 284 aa9.27□□□□□ -0.93
CLCN3-206ENST00000507875 TNNI2P48788 182 aa9.27□□□□□ -0.93
CLCN3-206ENST00000507875 OCSTAMPQ9BR26 566 aa9.27□□□□□ -0.93
CLCN3-206ENST00000507875 PUS10Q3MIT2 529 aaKnown RBP9.27□□□□□ -0.93
CLCN3-206ENST00000507875 PLPP7Q8NBV4 271 aa9.27□□□□□ -0.93
CLCN3-206ENST00000507875 NFATC2IPQ8NCF5 419 aa9.27□□□□□ -0.93
CLCN3-206ENST00000507875 GTF3C2Q8WUA4 911 aaPredicted RBP9.27□□□□□ -0.93
CLCN3-206ENST00000507875 ASB16Q96NS5 453 aa9.27□□□□□ -0.93
CLCN3-206ENST00000507875 CDCA7Q9BWT1 371 aaPredicted RBP9.27□□□□□ -0.93
CLCN3-206ENST00000507875 IQSEC3Q9UPP2 1182 aaPredicted RBP9.27□□□□□ -0.93
CLCN3-206ENST00000507875 EDC4Q6P2E9 1401 aaKnown RBP9.26□□□□□ -0.93
CLCN3-206ENST00000507875 PPIP5K1Q6PFW1 1433 aa9.26□□□□□ -0.93
CLCN3-206ENST00000507875 NBPF26B4DH59 902 aa9.26□□□□□ -0.93
CLCN3-206ENST00000507875 P4HBP07237 508 aaKnown RBP9.26□□□□□ -0.93
CLCN3-206ENST00000507875 NCLP19338 710 aaKnown RBP9.26□□□□□ -0.93
CLCN3-206ENST00000507875 MRPL58Q14197 206 aaKnown RBP9.26□□□□□ -0.93
CLCN3-206ENST00000507875 NSD3Q9BZ95 1437 aa9.26□□□□□ -0.93
CLCN3-206ENST00000507875 TRIM6-TRIM34B2RNG4 842 aa9.26□□□□□ -0.93
CLCN3-206ENST00000507875 NT5DC4Q86YG4 428 aa9.26□□□□□ -0.93
CLCN3-206ENST00000507875 CEP126Q9P2H0 1117 aa9.26□□□□□ -0.93
CLCN3-206ENST00000507875 NUDT16Q96DE0 195 aaKnown RBP9.25□□□□□ -0.93
CLCN3-206ENST00000507875 TANGO6Q9C0B7 1094 aa9.25□□□□□ -0.93
CLCN3-206ENST00000507875 A0A1W2PP64 1363 aa9.25□□□□□ -0.93
CLCN3-206ENST00000507875 NLRP13Q86W25 1043 aa9.25□□□□□ -0.93
CLCN3-206ENST00000507875 TMC1Q8TDI8 760 aa9.25□□□□□ -0.93
CLCN3-206ENST00000507875 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
CLCN3-206ENST00000507875 POLR3AO14802 1390 aaPredicted RBP9.24□□□□□ -0.93
CLCN3-206ENST00000507875 SFI1A8K8P3 1242 aa9.24□□□□□ -0.93
CLCN3-206ENST00000507875 SAFB2Q14151 953 aaKnown RBP eCLIP9.24□□□□□ -0.93
CLCN3-206ENST00000507875 METTL16Q86W50 562 aaKnown RBP9.24□□□□□ -0.93
CLCN3-206ENST00000507875 GPATCH3Q96I76 525 aa9.24□□□□□ -0.93
CLCN3-206ENST00000507875 SLC12A5Q9H2X9 1139 aa9.24□□□□□ -0.93
CLCN3-206ENST00000507875 SUPT16HQ9Y5B9 1047 aaKnown RBP9.24□□□□□ -0.93
CLCN3-206ENST00000507875 PHTF2Q8N3S3 785 aa9.24□□□□□ -0.93
CLCN3-206ENST00000507875 PNMA1Q8ND90 353 aa9.24□□□□□ -0.93
CLCN3-206ENST00000507875 SEPT9Q9UHD8 586 aaPredicted RBP9.24□□□□□ -0.93
CLCN3-206ENST00000507875 SF3A1Q15459 793 aaKnown RBP9.23□□□□□ -0.93
CLCN3-206ENST00000507875 TAS1R3Q7RTX0 852 aa9.23□□□□□ -0.93
CLCN3-206ENST00000507875 RNF135Q8IUD6 432 aa9.23□□□□□ -0.93
CLCN3-206ENST00000507875 ANKRD13AQ8IZ07 590 aa9.23□□□□□ -0.93
CLCN3-206ENST00000507875 CARD14Q9BXL6 1004 aa9.23□□□□□ -0.93
CLCN3-206ENST00000507875 CXXC1Q9P0U4 656 aaPredicted RBP9.23□□□□□ -0.93
CLCN3-206ENST00000507875 ROBO1Q9Y6N7 1651 aa9.23□□□□□ -0.93
CLCN3-206ENST00000507875 MED1Q15648 1581 aaPredicted RBP9.23□□□□□ -0.93
CLCN3-206ENST00000507875 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
CLCN3-206ENST00000507875 TINF2Q9BSI4 451 aa9.23□□□□□ -0.93
CLCN3-206ENST00000507875 PIF1Q9H611 641 aa9.23□□□□□ -0.93
CLCN3-206ENST00000507875 FKBPLQ9UIM3 349 aa9.23□□□□□ -0.93
CLCN3-206ENST00000507875 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLCN3-206ENST00000507875 LHX6Q9UPM6 363 aa9.23□□□□□ -0.93
CLCN3-206ENST00000507875 ZBTB7BO15156 539 aaPredicted RBP9.22□□□□□ -0.93
CLCN3-206ENST00000507875 NAA30Q147X3 362 aaPredicted RBP9.22□□□□□ -0.93
CLCN3-206ENST00000507875 SWI5Q1ZZU3 235 aa9.22□□□□□ -0.93
CLCN3-206ENST00000507875 DCTN4Q9UJW0 460 aa9.22□□□□□ -0.93
CLCN3-206ENST00000507875 TTC21AQ8NDW8 1320 aa9.22□□□□□ -0.93
CLCN3-206ENST00000507875 EAPPQ56P03 285 aaPredicted RBP9.22□□□□□ -0.93
CLCN3-206ENST00000507875 CC2D2BQ6DHV5 1058 aa9.22□□□□□ -0.93
CLCN3-206ENST00000507875 ANP32EQ9BTT0 268 aa9.22□□□□□ -0.93
CLCN3-206ENST00000507875 CABP1Q9NZU7 370 aa9.22□□□□□ -0.93
CLCN3-206ENST00000507875 C21orf2O43822 256 aa9.21□□□□□ -0.93
CLCN3-206ENST00000507875 TRAF7Q6Q0C0 670 aa9.21□□□□□ -0.93
CLCN3-206ENST00000507875 ILDR2Q71H61 639 aa9.21□□□□□ -0.93
CLCN3-206ENST00000507875 TEX2Q8IWB9 1127 aa9.21□□□□□ -0.93
CLCN3-206ENST00000507875 ZC3H4Q9UPT8 1303 aaKnown RBP9.21□□□□□ -0.94
CLCN3-206ENST00000507875 RNF19BQ6ZMZ0 732 aa9.21□□□□□ -0.94
CLCN3-206ENST00000507875 FAM43BQ6ZT52 329 aaPredicted RBP9.21□□□□□ -0.94
CLCN3-206ENST00000507875 PRR36Q9H6K5 1346 aa9.21□□□□□ -0.94
CLCN3-206ENST00000507875 JCADQ9P266 1359 aa9.21□□□□□ -0.94
CLCN3-206ENST00000507875 USP6P35125 1406 aa9.2□□□□□ -0.94
CLCN3-206ENST00000507875 SSH2Q76I76 1423 aa9.2□□□□□ -0.94
CLCN3-206ENST00000507875 GTF2F1P35269 517 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLCN3-206ENST00000507875 CCDC184Q52MB2 194 aa9.2□□□□□ -0.94
CLCN3-206ENST00000507875 ACBD3Q9H3P7 528 aa9.2□□□□□ -0.94
CLCN3-206ENST00000507875 MRS2Q9HD23 443 aa9.2□□□□□ -0.94
CLCN3-206ENST00000507875 MAP2P11137 1827 aaKnown RBP9.2□□□□□ -0.94
CLCN3-206ENST00000507875 HNRNPUQ00839 825 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLCN3-206ENST00000507875 CCDC144BQ3MJ40 725 aa9.2□□□□□ -0.94
CLCN3-206ENST00000507875 DNAAF2Q9NVR5 837 aaKnown RBP9.2□□□□□ -0.94
CLCN3-206ENST00000507875 PRKAG2Q9UGJ0 569 aa9.2□□□□□ -0.94
CLCN3-206ENST00000507875 AATKQ6ZMQ8 1374 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 USP31Q70CQ4 1352 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 PPP2R1AP30153 589 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 TMC7Q7Z402 723 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 MORC1Q86VD1 984 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 C1orf216Q8TAB5 229 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 BCL2L12Q9HB09 334 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 WWC3Q9ULE0 1092 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 MST1RQ04912 1400 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 CFHP08603 1231 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 CANXP27824 592 aaKnown RBP9.19□□□□□ -0.94
CLCN3-206ENST00000507875 FKBP5Q13451 457 aaPredicted RBP9.19□□□□□ -0.94
CLCN3-206ENST00000507875 CC2D1BQ5T0F9 858 aaKnown RBP9.19□□□□□ -0.94
CLCN3-206ENST00000507875 NLGN1Q8N2Q7 840 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 SLC27A5Q9Y2P5 690 aa9.19□□□□□ -0.94
CLCN3-206ENST00000507875 SMG6Q86US8 1419 aaKnown RBP9.18□□□□□ -0.94
CLCN3-206ENST00000507875 PHLPP1O60346 1717 aa9.18□□□□□ -0.94
CLCN3-206ENST00000507875 TRPM3Q9HCF6 1732 aaPredicted RBP9.18□□□□□ -0.94
CLCN3-206ENST00000507875 SCAMP3O14828 347 aaKnown RBP9.18□□□□□ -0.94
CLCN3-206ENST00000507875 DEKP35659 375 aaKnown RBP9.18□□□□□ -0.94
CLCN3-206ENST00000507875 LYPD8Q6UX82 237 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms