RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CSRNP1Q96S65 589 aa9.98□□□□□ -0.81
VCAN-207ENST00000507162 GPRC5DQ9NZD1 345 aa9.98□□□□□ -0.81
VCAN-207ENST00000507162 COLQQ9Y215 455 aaPredicted RBP9.98□□□□□ -0.81
VCAN-207ENST00000507162 FAM155AB1AL88 458 aaPredicted RBP9.97□□□□□ -0.81
VCAN-207ENST00000507162 PSMD1Q99460 953 aa9.97□□□□□ -0.81
VCAN-207ENST00000507162 CACNA1SQ13698 1873 aa9.97□□□□□ -0.81
VCAN-207ENST00000507162 MKI67P46013 3256 aaKnown RBP9.97□□□□□ -0.81
VCAN-207ENST00000507162 TJP1Q07157 1748 aa9.96□□□□□ -0.81
VCAN-207ENST00000507162 SLC24A1O60721 1099 aa9.96□□□□□ -0.82
VCAN-207ENST00000507162 AEBP1Q8IUX7 1158 aa9.96□□□□□ -0.82
VCAN-207ENST00000507162 NIM1KQ8IY84 436 aa9.96□□□□□ -0.82
VCAN-207ENST00000507162 VSIG10Q8N0Z9 540 aa9.96□□□□□ -0.82
VCAN-207ENST00000507162 C2orf69Q8N8R5 385 aa9.96□□□□□ -0.82
VCAN-207ENST00000507162 CARD14Q9BXL6 1004 aa9.96□□□□□ -0.82
VCAN-207ENST00000507162 COL11A2P13942 1736 aaPredicted RBP9.96□□□□□ -0.82
VCAN-207ENST00000507162 TCERG1O14776 1098 aaKnown RBP9.95□□□□□ -0.82
VCAN-207ENST00000507162 GMPSP49915 693 aaPredicted RBP9.95□□□□□ -0.82
VCAN-207ENST00000507162 TPTE2Q6XPS3 522 aa9.95□□□□□ -0.82
VCAN-207ENST00000507162 GBA2Q9HCG7 927 aaPredicted RBP9.95□□□□□ -0.82
VCAN-207ENST00000507162 PGAP2Q9UHJ9 254 aa9.95□□□□□ -0.82
VCAN-207ENST00000507162 RNMTO43148 476 aaKnown RBP9.94□□□□□ -0.82
VCAN-207ENST00000507162 CAMTA2O94983 1202 aa9.94□□□□□ -0.82
VCAN-207ENST00000507162 TBC1D8O95759 1140 aa9.94□□□□□ -0.82
VCAN-207ENST00000507162 A1BGP04217 495 aa9.94□□□□□ -0.82
VCAN-207ENST00000507162 GTF2E1P29083 439 aaPredicted RBP9.94□□□□□ -0.82
VCAN-207ENST00000507162 HIRAP54198 1017 aaPredicted RBP9.94□□□□□ -0.82
VCAN-207ENST00000507162 FBXO46Q6PJ61 603 aaPredicted RBP9.94□□□□□ -0.82
VCAN-207ENST00000507162 DZIP3Q86Y13 1208 aaKnown RBP9.94□□□□□ -0.82
VCAN-207ENST00000507162 TTC5Q8N0Z6 440 aa9.94□□□□□ -0.82
VCAN-207ENST00000507162 ZC3H15Q8WU90 426 aaKnown RBP9.94□□□□□ -0.82
VCAN-207ENST00000507162 ZNF296Q8WUU4 475 aaPredicted RBP9.94□□□□□ -0.82
VCAN-207ENST00000507162 BCL2L13Q9BXK5 485 aa9.94□□□□□ -0.82
VCAN-207ENST00000507162 KIAA0100Q14667 2235 aaKnown RBP9.93□□□□□ -0.82
VCAN-207ENST00000507162 KLRG2A4D1S0 409 aaPredicted RBP9.93□□□□□ -0.82
VCAN-207ENST00000507162 POTEFA5A3E0 1075 aa9.93□□□□□ -0.82
VCAN-207ENST00000507162 PPIP5K2O43314 1243 aa9.93□□□□□ -0.82
VCAN-207ENST00000507162 IL6STP40189 918 aaPredicted RBP9.93□□□□□ -0.82
VCAN-207ENST00000507162 CXCL9Q07325 125 aa9.93□□□□□ -0.82
VCAN-207ENST00000507162 SULT6B1Q6IMI4 303 aa9.93□□□□□ -0.82
VCAN-207ENST00000507162 SZT2Q5T011 3432 aa9.93□□□□□ -0.82
VCAN-207ENST00000507162 AOC3Q16853 763 aa9.92□□□□□ -0.82
VCAN-207ENST00000507162 CC2D2BQ6DHV5 1058 aa9.92□□□□□ -0.82
VCAN-207ENST00000507162 TRPM4Q8TD43 1214 aa9.92□□□□□ -0.82
VCAN-207ENST00000507162 NPC1L1Q9UHC9 1359 aa9.91□□□□□ -0.82
VCAN-207ENST00000507162 H7C1D1 291 aa9.91□□□□□ -0.82
VCAN-207ENST00000507162 KRT26Q7Z3Y9 468 aa9.91□□□□□ -0.82
VCAN-207ENST00000507162 TEX13AQ9BXU3 409 aaPredicted RBP9.91□□□□□ -0.82
VCAN-207ENST00000507162 CNOT7Q9UIV1 285 aaKnown RBP9.91□□□□□ -0.82
VCAN-207ENST00000507162 NIP7Q9Y221 180 aaKnown RBP eCLIP9.91□□□□□ -0.82
VCAN-207ENST00000507162 SHTN1A0MZ66 631 aa9.9□□□□□ -0.82
VCAN-207ENST00000507162 RAD17O75943 681 aa9.9□□□□□ -0.82
VCAN-207ENST00000507162 SLC10A3P09131 477 aa9.9□□□□□ -0.82
VCAN-207ENST00000507162 PIP4K2AP48426 406 aaPredicted RBP9.9□□□□□ -0.82
VCAN-207ENST00000507162 RBM26Q5T8P6 1007 aaKnown RBP9.9□□□□□ -0.82
VCAN-207ENST00000507162 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.82
VCAN-207ENST00000507162 ZNRF3Q9ULT6 936 aa9.9□□□□□ -0.82
VCAN-207ENST00000507162 COL4A5P29400 1685 aa9.9□□□□□ -0.83
VCAN-207ENST00000507162 AKAP11Q9UKA4 1901 aa9.9□□□□□ -0.83
VCAN-207ENST00000507162 GPR25O00155 361 aa9.89□□□□□ -0.83
VCAN-207ENST00000507162 EN2P19622 333 aaPredicted RBP9.89□□□□□ -0.83
VCAN-207ENST00000507162 TNIP1Q15025 636 aa9.89□□□□□ -0.83
VCAN-207ENST00000507162 GRIPAP1Q4V328 841 aa9.89□□□□□ -0.83
VCAN-207ENST00000507162 SLC51AQ86UW1 340 aa9.89□□□□□ -0.83
VCAN-207ENST00000507162 RPGRQ92834 1020 aaKnown RBP9.89□□□□□ -0.83
VCAN-207ENST00000507162 DCPSQ96C86 337 aaKnown RBP9.89□□□□□ -0.83
VCAN-207ENST00000507162 ZNF496Q96IT1 587 aaPredicted RBP9.89□□□□□ -0.83
VCAN-207ENST00000507162 TMX4Q9H1E5 349 aaPredicted RBP9.89□□□□□ -0.83
VCAN-207ENST00000507162 ZNF652Q9Y2D9 606 aa9.89□□□□□ -0.83
VCAN-207ENST00000507162 ADM5C9JUS6 153 aa9.88□□□□□ -0.83
VCAN-207ENST00000507162 CDCA8Q53HL2 280 aa9.88□□□□□ -0.83
VCAN-207ENST00000507162 INTS3Q68E01 1043 aaKnown RBP9.88□□□□□ -0.83
VCAN-207ENST00000507162 CLEC4GQ6UXB4 293 aa9.88□□□□□ -0.83
VCAN-207ENST00000507162 SAMD7Q7Z3H4 446 aa9.88□□□□□ -0.83
VCAN-207ENST00000507162 COL6A3P12111 3177 aa9.88□□□□□ -0.83
VCAN-207ENST00000507162 KIF20BQ96Q89 1820 aa9.87□□□□□ -0.83
VCAN-207ENST00000507162 FKTNO75072 461 aa9.87□□□□□ -0.83
VCAN-207ENST00000507162 TBC1D10BQ4KMP7 808 aaPredicted RBP9.87□□□□□ -0.83
VCAN-207ENST00000507162 MICALL2Q8IY33 904 aa9.87□□□□□ -0.83
VCAN-207ENST00000507162 ARFGEF2Q9Y6D5 1785 aa9.86□□□□□ -0.83
VCAN-207ENST00000507162 H0YGN5 161 aa9.86□□□□□ -0.83
VCAN-207ENST00000507162 PPEF1O14829 653 aaPredicted RBP9.86□□□□□ -0.83
VCAN-207ENST00000507162 NUTM1Q86Y26 1132 aa9.86□□□□□ -0.83
VCAN-207ENST00000507162 RASAL3Q86YV0 1011 aa9.86□□□□□ -0.83
VCAN-207ENST00000507162 RBM17Q96I25 401 aaKnown RBP9.86□□□□□ -0.83
VCAN-207ENST00000507162 TRIM17Q9Y577 477 aa9.86□□□□□ -0.83
VCAN-207ENST00000507162 ZNF790Q6PG37 636 aa9.85□□□□□ -0.83
VCAN-207ENST00000507162 OTUD5Q96G74 571 aa9.85□□□□□ -0.83
VCAN-207ENST00000507162 ZBTB12Q9Y330 459 aaPredicted RBP9.85□□□□□ -0.83
VCAN-207ENST00000507162 HEG1Q9ULI3 1381 aa9.85□□□□□ -0.83
VCAN-207ENST00000507162 PRAMEF22A3QJZ6 481 aa9.84□□□□□ -0.83
VCAN-207ENST00000507162 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
VCAN-207ENST00000507162 TEFQ10587 303 aa9.84□□□□□ -0.83
VCAN-207ENST00000507162 MKRN3Q13064 507 aaKnown RBP9.84□□□□□ -0.83
VCAN-207ENST00000507162 MTHFSDQ2M296 383 aaKnown RBP9.84□□□□□ -0.83
VCAN-207ENST00000507162 CRY2Q49AN0 593 aa9.84□□□□□ -0.83
VCAN-207ENST00000507162 SULF1Q8IWU6 871 aa9.84□□□□□ -0.83
VCAN-207ENST00000507162 SUPT20HQ8NEM7 779 aa9.84□□□□□ -0.83
VCAN-207ENST00000507162 FMNL2Q96PY5 1086 aa9.84□□□□□ -0.83
VCAN-207ENST00000507162 POLR3GLQ9BT43 218 aa9.84□□□□□ -0.83
VCAN-207ENST00000507162 TMEM106CQ9BVX2 250 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms