RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 XIRP1Q702N8 1843 aaKnown RBP17.9■□□□□ 0.46
HERC6-206ENST00000506714 VPS37CA5D8V6 355 aaPredicted RBP17.9■□□□□ 0.46
HERC6-206ENST00000506714 ANKRD1Q15327 319 aa17.9■□□□□ 0.46
HERC6-206ENST00000506714 IP6K1Q92551 441 aa17.9■□□□□ 0.46
HERC6-206ENST00000506714 C9orf78Q9NZ63 289 aaPredicted RBP17.9■□□□□ 0.46
HERC6-206ENST00000506714 TEFQ10587 303 aa17.89■□□□□ 0.46
HERC6-206ENST00000506714 ME3Q16798 604 aa17.89■□□□□ 0.46
HERC6-206ENST00000506714 LARP1BQ659C4 914 aaKnown RBP17.89■□□□□ 0.46
HERC6-206ENST00000506714 MAP4K1Q92918 833 aa17.89■□□□□ 0.46
HERC6-206ENST00000506714 CCDC94Q9BW85 323 aaPredicted RBP17.89■□□□□ 0.46
HERC6-206ENST00000506714 TPRNQ4KMQ1 711 aa17.89■□□□□ 0.45
HERC6-206ENST00000506714 SMAP1Q8IYB5 467 aaPredicted RBP17.89■□□□□ 0.45
HERC6-206ENST00000506714 MPNDQ8N594 471 aa17.89■□□□□ 0.45
HERC6-206ENST00000506714 KIAA1524Q8TCG1 905 aa17.89■□□□□ 0.45
HERC6-206ENST00000506714 ALDH8A1Q9H2A2 487 aaPredicted RBP17.89■□□□□ 0.45
HERC6-206ENST00000506714 SNRKQ9NRH2 765 aa17.89■□□□□ 0.45
HERC6-206ENST00000506714 KCNJ4P48050 445 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 PLCB2Q00722 1185 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 RNF20Q5VTR2 975 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 CREB3L3Q68CJ9 461 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 USHBP1Q8N6Y0 703 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 LGR6Q9HBX8 967 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 KIF3AQ9Y496 699 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 RBM8AQ9Y5S9 174 aaKnown RBP17.88■□□□□ 0.45
HERC6-206ENST00000506714 MST1RQ04912 1400 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 TRPM3Q9HCF6 1732 aaPredicted RBP17.88■□□□□ 0.45
HERC6-206ENST00000506714 BTBD11A6QL63 1104 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 AKAP4Q5JQC9 854 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 FAM200AQ8TCP9 573 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 TAOK2Q9UL54 1235 aa17.88■□□□□ 0.45
HERC6-206ENST00000506714 CHAF1AQ13111 956 aaPredicted RBP17.87■□□□□ 0.45
HERC6-206ENST00000506714 MAP3K11Q16584 847 aa17.87■□□□□ 0.45
HERC6-206ENST00000506714 ST3GAL1Q11201 340 aa17.87■□□□□ 0.45
HERC6-206ENST00000506714 KSR2Q6VAB6 950 aa17.87■□□□□ 0.45
HERC6-206ENST00000506714 AACSQ86V21 672 aa17.87■□□□□ 0.45
HERC6-206ENST00000506714 SCAND2PQ9GZW5 306 aaPredicted RBP17.87■□□□□ 0.45
HERC6-206ENST00000506714 NUP62CLQ9H1M0 184 aa17.87■□□□□ 0.45
HERC6-206ENST00000506714 TPCN1Q9ULQ1 816 aa17.86■□□□□ 0.45
HERC6-206ENST00000506714 MAP3K2Q9Y2U5 619 aa17.86■□□□□ 0.45
HERC6-206ENST00000506714 NCAPD2Q15021 1401 aa17.86■□□□□ 0.45
HERC6-206ENST00000506714 TTC6Q86TZ1 520 aa17.86■□□□□ 0.45
HERC6-206ENST00000506714 CADPS2Q86UW7 1296 aa17.86■□□□□ 0.45
HERC6-206ENST00000506714 OVOS2A0A0G2JMS6 1433 aa17.85■□□□□ 0.45
HERC6-206ENST00000506714 PLEKHO1Q53GL0 409 aaPredicted RBP17.85■□□□□ 0.45
HERC6-206ENST00000506714 NECAB1Q8N987 351 aa17.85■□□□□ 0.45
HERC6-206ENST00000506714 SLC27A2O14975 620 aa17.84■□□□□ 0.45
HERC6-206ENST00000506714 G3BP1Q13283 466 aaKnown RBP eCLIP17.84■□□□□ 0.45
HERC6-206ENST00000506714 NBPF6Q5VWK0 638 aa17.84■□□□□ 0.45
HERC6-206ENST00000506714 BLOC1S2Q6QNY1 142 aa17.84■□□□□ 0.45
HERC6-206ENST00000506714 NBPF4Q96M43 638 aa17.84■□□□□ 0.45
HERC6-206ENST00000506714 PHRF1Q9P1Y6 1649 aaKnown RBP17.84■□□□□ 0.45
HERC6-206ENST00000506714 AP5Z1O43299 807 aa17.84■□□□□ 0.45
HERC6-206ENST00000506714 KCNQ3O43525 872 aa17.84■□□□□ 0.45
HERC6-206ENST00000506714 NMIQ13287 307 aaPredicted RBP17.84■□□□□ 0.45
HERC6-206ENST00000506714 AMOTQ4VCS5 1084 aa17.84■□□□□ 0.45
HERC6-206ENST00000506714 C17orf53Q8N3J3 647 aaPredicted RBP17.84■□□□□ 0.45
HERC6-206ENST00000506714 HMG20BQ9P0W2 317 aa17.84■□□□□ 0.45
HERC6-206ENST00000506714 NFAT5O94916 1531 aa17.84■□□□□ 0.45
HERC6-206ENST00000506714 UTYO14607 1347 aa17.83■□□□□ 0.45
HERC6-206ENST00000506714 RGPD2P0DJD1 1756 aa17.83■□□□□ 0.45
HERC6-206ENST00000506714 GOLGA6L4A6NEF3 574 aa17.83■□□□□ 0.45
HERC6-206ENST00000506714 ZBTB22O15209 634 aa17.83■□□□□ 0.45
HERC6-206ENST00000506714 ANXA1P04083 346 aa17.83■□□□□ 0.45
HERC6-206ENST00000506714 LMOD2Q6P5Q4 547 aa17.83■□□□□ 0.45
HERC6-206ENST00000506714 KCNF1Q9H3M0 494 aa17.83■□□□□ 0.45
HERC6-206ENST00000506714 DDX19AQ9NUU7 478 aaKnown RBP17.83■□□□□ 0.45
HERC6-206ENST00000506714 NPHP3Q7Z494 1330 aa17.83■□□□□ 0.44
HERC6-206ENST00000506714 ZNF335Q9H4Z2 1342 aaPredicted RBP17.83■□□□□ 0.44
HERC6-206ENST00000506714 TYRO3Q06418 890 aa17.83■□□□□ 0.44
HERC6-206ENST00000506714 TSGA10IPQ3SY00 556 aa17.83■□□□□ 0.44
HERC6-206ENST00000506714 ZNF530Q6P9A1 599 aaPredicted RBP17.83■□□□□ 0.44
HERC6-206ENST00000506714 LINS1Q8NG48 757 aa17.83■□□□□ 0.44
HERC6-206ENST00000506714 PA2G4Q9UQ80 394 aaKnown RBP17.83■□□□□ 0.44
HERC6-206ENST00000506714 RPS6KB1P23443 525 aa17.82■□□□□ 0.44
HERC6-206ENST00000506714 CDC37L1Q7L3B6 337 aa17.82■□□□□ 0.44
HERC6-206ENST00000506714 KRT28Q7Z3Y7 464 aa17.82■□□□□ 0.44
HERC6-206ENST00000506714 FAM227BQ96M60 508 aa17.82■□□□□ 0.44
HERC6-206ENST00000506714 TNMDQ9H2S6 317 aa17.82■□□□□ 0.44
HERC6-206ENST00000506714 MRVI1Q9Y6F6 885 aa17.82■□□□□ 0.44
HERC6-206ENST00000506714 ZBTB7CA1YPR0 619 aa17.82■□□□□ 0.44
HERC6-206ENST00000506714 GRM8O00222 908 aa17.82■□□□□ 0.44
HERC6-206ENST00000506714 DDX58O95786 925 aaKnown RBP17.82■□□□□ 0.44
HERC6-206ENST00000506714 ZNF710Q8N1W2 664 aa17.82■□□□□ 0.44
HERC6-206ENST00000506714 KCNH5Q8NCM2 988 aa17.82■□□□□ 0.44
HERC6-206ENST00000506714 GIGYF1O75420 1035 aaPredicted RBP17.81■□□□□ 0.44
HERC6-206ENST00000506714 SASH1O94885 1247 aa17.81■□□□□ 0.44
HERC6-206ENST00000506714 SPATA32Q96LK8 384 aa17.81■□□□□ 0.44
HERC6-206ENST00000506714 PYCARDQ9ULZ3 195 aa17.81■□□□□ 0.44
HERC6-206ENST00000506714 HEG1Q9ULI3 1381 aa17.81■□□□□ 0.44
HERC6-206ENST00000506714 ALS2Q96Q42 1657 aa17.81■□□□□ 0.44
HERC6-206ENST00000506714 RNMTO43148 476 aaKnown RBP17.81■□□□□ 0.44
HERC6-206ENST00000506714 RBM43Q6ZSC3 357 aaKnown RBP17.81■□□□□ 0.44
HERC6-206ENST00000506714 SPC24Q8NBT2 197 aa17.81■□□□□ 0.44
HERC6-206ENST00000506714 EAF2Q96CJ1 260 aaPredicted RBP17.81■□□□□ 0.44
HERC6-206ENST00000506714 CAVIN2O95810 425 aa17.8■□□□□ 0.44
HERC6-206ENST00000506714 LIG1P18858 919 aa17.8■□□□□ 0.44
HERC6-206ENST00000506714 KRT32Q14532 448 aa17.8■□□□□ 0.44
HERC6-206ENST00000506714 C1orf141Q5JVX7 400 aa17.8■□□□□ 0.44
HERC6-206ENST00000506714 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.8■□□□□ 0.44
HERC6-206ENST00000506714 FSD1Q9BTV5 496 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms