RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 C2CD2LO14523 706 aa5.43□□□□□ -1.54
GYPB-207ENST00000506679 WIPF1O43516 503 aa5.43□□□□□ -1.54
GYPB-207ENST00000506679 ABL1P00519 1130 aa5.43□□□□□ -1.54
GYPB-207ENST00000506679 MPSTP25325 297 aa5.43□□□□□ -1.54
GYPB-207ENST00000506679 ZAP70P43403 619 aa5.43□□□□□ -1.54
GYPB-207ENST00000506679 ARSDP51689 593 aa5.43□□□□□ -1.54
GYPB-207ENST00000506679 ARHGAP4P98171 946 aa5.43□□□□□ -1.54
GYPB-207ENST00000506679 SFSWAPQ12872 951 aaKnown RBP5.43□□□□□ -1.54
GYPB-207ENST00000506679 MBIPQ9NS73 344 aa5.43□□□□□ -1.54
GYPB-207ENST00000506679 MARK1Q9P0L2 795 aa5.43□□□□□ -1.54
GYPB-207ENST00000506679 H3BRB1 525 aa5.42□□□□□ -1.54
GYPB-207ENST00000506679 FAM13AO94988 1023 aa5.42□□□□□ -1.54
GYPB-207ENST00000506679 CD33P20138 364 aa5.42□□□□□ -1.54
GYPB-207ENST00000506679 EIF1AXP47813 144 aaKnown RBP5.42□□□□□ -1.54
GYPB-207ENST00000506679 CTBSQ01459 385 aa5.42□□□□□ -1.54
GYPB-207ENST00000506679 NOM1Q5C9Z4 860 aaKnown RBP5.42□□□□□ -1.54
GYPB-207ENST00000506679 TUT1Q9H6E5 874 aaKnown RBP5.42□□□□□ -1.54
GYPB-207ENST00000506679 ANO2Q9NQ90 1003 aa5.42□□□□□ -1.54
GYPB-207ENST00000506679 KCNH4Q9UQ05 1017 aa5.42□□□□□ -1.54
GYPB-207ENST00000506679 EGFRP00533 1210 aa5.41□□□□□ -1.54
GYPB-207ENST00000506679 SLURP2P0DP57 97 aa5.41□□□□□ -1.54
GYPB-207ENST00000506679 EPB42P16452 691 aa5.41□□□□□ -1.54
GYPB-207ENST00000506679 MX2P20592 715 aa5.41□□□□□ -1.54
GYPB-207ENST00000506679 SRSF11Q05519 484 aaKnown RBP5.41□□□□□ -1.54
GYPB-207ENST00000506679 GRIN2CQ14957 1233 aa5.41□□□□□ -1.54
GYPB-207ENST00000506679 ALKBH2Q6NS38 261 aa5.41□□□□□ -1.54
GYPB-207ENST00000506679 RTCBQ9Y3I0 505 aaKnown RBP5.41□□□□□ -1.54
GYPB-207ENST00000506679 KCNMB2Q9Y691 235 aa5.41□□□□□ -1.54
GYPB-207ENST00000506679 IGF1RP08069 1367 aa5.41□□□□□ -1.54
GYPB-207ENST00000506679 FZD6O60353 706 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 MAP2K3P46734 347 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 TRIP4Q15650 581 aaPredicted RBP5.4□□□□□ -1.54
GYPB-207ENST00000506679 ATCAYQ86WG3 371 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 AEBP1Q8IUX7 1158 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 GLYCTKQ8IVS8 523 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 CNTNAP3BQ96NU0 1288 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 SLC30A3Q99726 388 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 MDFIQ99750 246 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 CNTNAP3Q9BZ76 1288 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 GSX2Q9BZM3 304 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 EFCC1Q9HA90 598 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 AVENQ9NQS1 362 aaPredicted RBP5.4□□□□□ -1.54
GYPB-207ENST00000506679 FAM13BQ9NYF5 915 aa5.4□□□□□ -1.54
GYPB-207ENST00000506679 PDGFAP04085 211 aa5.39□□□□□ -1.55
GYPB-207ENST00000506679 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
GYPB-207ENST00000506679 MZF1P28698 734 aaPredicted RBP5.39□□□□□ -1.55
GYPB-207ENST00000506679 SPEM2Q0P670 501 aa5.39□□□□□ -1.55
GYPB-207ENST00000506679 ZNF468Q5VIY5 522 aaPredicted RBP5.39□□□□□ -1.55
GYPB-207ENST00000506679 RGL4Q8IZJ4 473 aa5.39□□□□□ -1.55
GYPB-207ENST00000506679 KLF15Q9UIH9 416 aa5.39□□□□□ -1.55
GYPB-207ENST00000506679 NSFL1CQ9UNZ2 370 aaKnown RBP5.39□□□□□ -1.55
GYPB-207ENST00000506679 USP20Q9Y2K6 914 aa5.39□□□□□ -1.55
GYPB-207ENST00000506679 ADAMTS2O95450 1211 aa5.38□□□□□ -1.55
GYPB-207ENST00000506679 ARAFP10398 606 aa5.38□□□□□ -1.55
GYPB-207ENST00000506679 BMP4P12644 408 aa5.38□□□□□ -1.55
GYPB-207ENST00000506679 CCINQ13939 588 aa5.38□□□□□ -1.55
GYPB-207ENST00000506679 GJD3Q8N144 294 aa5.38□□□□□ -1.55
GYPB-207ENST00000506679 GPR152Q8TDT2 470 aa5.38□□□□□ -1.55
GYPB-207ENST00000506679 PIK3R5Q8WYR1 880 aa5.38□□□□□ -1.55
GYPB-207ENST00000506679 SIN3BO75182 1162 aa5.37□□□□□ -1.55
GYPB-207ENST00000506679 IGHA2P01877 340 aa5.37□□□□□ -1.55
GYPB-207ENST00000506679 SND1Q7KZF4 910 aaKnown RBP eCLIP5.37□□□□□ -1.555e-6■■■□□ 15.5
GYPB-207ENST00000506679 EDEM1Q92611 657 aa5.37□□□□□ -1.55
GYPB-207ENST00000506679 ACDQ96AP0 544 aa5.37□□□□□ -1.55
GYPB-207ENST00000506679 NUDT16Q96DE0 195 aaKnown RBP5.37□□□□□ -1.55
GYPB-207ENST00000506679 LRRC4BQ9NT99 713 aa5.37□□□□□ -1.55
GYPB-207ENST00000506679 CCDC87Q9NVE4 849 aa5.37□□□□□ -1.55
GYPB-207ENST00000506679 POLIQ9UNA4 740 aa5.37□□□□□ -1.55
GYPB-207ENST00000506679 XYLBO75191 536 aa5.36□□□□□ -1.55
GYPB-207ENST00000506679 MAP3K6O95382 1288 aa5.36□□□□□ -1.55
GYPB-207ENST00000506679 DNM1Q05193 864 aaKnown RBP5.36□□□□□ -1.55
GYPB-207ENST00000506679 XKR5Q6UX68 686 aa5.36□□□□□ -1.55
GYPB-207ENST00000506679 SLCO4C1Q6ZQN7 724 aa5.36□□□□□ -1.55
GYPB-207ENST00000506679 SYT9Q86SS6 491 aa5.36□□□□□ -1.55
GYPB-207ENST00000506679 CMTR1Q8N1G2 835 aaKnown RBP5.36□□□□□ -1.55
GYPB-207ENST00000506679 TNFRSF25Q93038 417 aa5.36□□□□□ -1.55
GYPB-207ENST00000506679 FAM129BQ96TA1 746 aa5.36□□□□□ -1.55
GYPB-207ENST00000506679 OXCT2Q9BYC2 517 aaPredicted RBP5.36□□□□□ -1.55
GYPB-207ENST00000506679 ZFATQ9P243 1243 aa5.36□□□□□ -1.55
GYPB-207ENST00000506679 ADARB2-AS1A8MUL3 147 aa5.35□□□□□ -1.55
GYPB-207ENST00000506679 RPLP1P05386 114 aaKnown RBP5.35□□□□□ -1.55
GYPB-207ENST00000506679 HOXD8P13378 290 aaPredicted RBP5.35□□□□□ -1.55
GYPB-207ENST00000506679 ADH6P28332 368 aa5.35□□□□□ -1.55
GYPB-207ENST00000506679 USP5P45974 858 aa5.35□□□□□ -1.55
GYPB-207ENST00000506679 PDE12Q6L8Q7 609 aaKnown RBP5.35□□□□□ -1.55
GYPB-207ENST00000506679 C1orf229Q6ZS94 237 aaPredicted RBP5.35□□□□□ -1.55
GYPB-207ENST00000506679 RAB44Q7Z6P3 723 aaPredicted RBP5.35□□□□□ -1.55
GYPB-207ENST00000506679 FCHSD1Q86WN1 690 aa5.35□□□□□ -1.55
GYPB-207ENST00000506679 GOLGA6L1Q8N7Z2 621 aa5.35□□□□□ -1.55
GYPB-207ENST00000506679 CITED4Q96RK1 184 aa5.35□□□□□ -1.55
GYPB-207ENST00000506679 RBCK1Q9BYM8 510 aa5.35□□□□□ -1.55
GYPB-207ENST00000506679 GGNBP2Q9H3C7 697 aa5.35□□□□□ -1.55
GYPB-207ENST00000506679 GDF2Q9UK05 429 aaPredicted RBP5.35□□□□□ -1.55
GYPB-207ENST00000506679 PRR12Q9ULL5 1215 aa5.35□□□□□ -1.55
GYPB-207ENST00000506679 FNDC3AQ9Y2H6 1198 aaKnown RBP5.35□□□□□ -1.55
GYPB-207ENST00000506679 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.35□□□□□ -1.55
GYPB-207ENST00000506679 UBAP1LF5GYI3 381 aa5.34□□□□□ -1.55
GYPB-207ENST00000506679 NDUFB5O43674 189 aa5.34□□□□□ -1.55
GYPB-207ENST00000506679 NFKB1P19838 968 aa5.34□□□□□ -1.55
GYPB-207ENST00000506679 TARSP26639 723 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms